| Id Trinity | FTRINITY_DN54723_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_160160 |
| Sequence | AAGTAGAAAAAGAATTTCATCAAACACCAAAAAAATTCAGTGTCTTAGTTCAGGTTTCTCTACCAAAAACATCATCGTTTTTTGTTCAGGTTTCCGTAAC GTATCATGGGTGATAGTCAGTACTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTAGTTCAGATTGAACATGCTTTGACAGCTGTTGGGTCTGG ACAAACATCTCTGGGAATTAAAGCTGCAAATGGAGTTGTTATTGCAACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTCCAAAAAATT CAGTTATTGACACCAAATATAGGTGTTGTTTATAGGTTTGTCTCTTTCTACATGTTTGAATCATTTGAGTTAATTATATATTTATATCATTAATTCCTTG TAGTTTGACGGTCCCTTCATATTATGGAATTTGGCGGTTTAGTTAGAATGCATTCTTAAACATGAGAGGCCTCTTAAGTTTCCTAGACACATAAAGATCT GAGACGGGAGGCAAGGCAGCTTCCTGAGGGAAGTGAGACACCAATTTTGAGGGAAAAGTTCTTTGTTGGACATAGAATAGAACTAGAAGTTCATGCTTGA AATTGATTAAATATTACATAGAAGATATTTTTTCAATCAAAATATTTTTCAATGTTTTGTACTTTTGTCACCGGCAAACTATTGCTTATGTGCTGTTGTA AATGTGAAGAAGTCTACCTAAATCAAACAATCATGTGGCAAACTAATGGTGTTTGTTGAGATATTAGCATATCATGGATAGGATTTCAATGAATTTTTTG AATGAGATTTACTGGATTCAACCTACAAACTAGAGGTTTGATGATGATTTTTTTCCTCGGGGAGGGGTGGGGTGGATAGGATTTCAATGGATTCTTATAA AGAGATTTACTGGATTCGTGCCACGACTTACAGGTTTGGCTAGGACATTTCTTTGGGAGGGCCGGGGAGTATGTGAGTTGTGAAATGGATGACTGCTTCT CTGGAAACACTTTGTTGTGAAATGAATACGGATGATGTTTAAAACTATATTCAAGCATTTAAAAAATGTCAATATATTAAACAACATAAATCACTTCCTT TCTGCTCTCTTTTTAATCTTTGAATGAGATAGACTGTCAAACTAAATTGTTTCCTTAGGTTTGTAAGTTTGTTTTTGTTTGAAACTTCATAAAACAGGGT GAGCCAGACTATCTTTCTCATTGCATTTGAGCTTTTTGTACATGGATGTGGTTATGCCTCCTAACTAGTATGCAAGTATCTTCTTGCCTTAACCTAAATT TTGTCTTTGTTGTTTAGTGGCATGGGTCCCGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGCTGTGCAGTATCAACAACTATATCAAGAACCAA TCCCTGTTACTCAACTTGTAAGGGAAGTTGCTGCTGTTATGCAGGAATTTACTCAGTCTGGTGGTGTTAGGCCTTTCGGAGTGTCCCTGCTGGTTGCTGG ATTTGATGACAAGGGACCACAATTATATCAGGTGGATCCATCAGGTTCATACTTCTCTTGGAAGGCTTCAGCCATGGGGAAAAATGTTTCTAATGCGAAG ACATTTCTTGAGAAGAGGTATACCGATGATATGGAGCTTGATGATGCAGTCCACACAGCAATATTGACCCTGAAGGAAGGCTTTGAGGGACAAATCTCTG GAAAAAACATTGAAATTGGCATAATTGGTGCTGACAAGAAGTTCAGGGTATTGACACCAGCTGAAATTGATGATTATTTGGGTGAAGTAGAGTAATGTGC AATGAAGAAATCCTCTATGTTCTTGAAGTTAGTGTTTGTTTGACAGTTAAGTTCAATTGAATTTGGAGATTGTAGCTTAAATGATGATAAGGACTTACTT GCCAATGGCAGTGGTGAATTTGTGAGATTCTCTTGTACTGGCCATCAAAGGGATAAAACTTTTTTTCCAAAGTGATTATTAGTTTACTTAACAGACCTCT TATGAATTTTCTACTTATTTTCTTTCTTCCTCTTATGATCTATTTGCTCCTTATCTGTCTATTGCTAATACTTACTTGCATGTTAAGTTTAATGCATTAT GCTGGCTTTGGGATCAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45170; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_160160
| Blastp | Proteasome subunit alpha type-2-A from Arabidopsis with 91.08% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-2-A from Arabidopsis with 90.62% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G16470) |
| CantataDB | Link to cantataDB annotations (CNT0001192) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443721.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |