| Id Trinity | FTRINITY_DN54723_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_160161 |
| Sequence | AAGTAGAAAAAGAATTTCATCAAACACCAAAAAAATTCAGTGTCTTAGTTCAGGTTTCTCTACCAAAAACATCATCGTTTTTTGTTCAGGTTTCCGTAAC GTATCATGGGTGATAGTCAGTACTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTAGTTCAGATTGAACATGCTTTGACAGCTGTTGGGTCTGG ACAAACATCTCTGGGAATTAAAGCTGCAAATGGAGTTGTTATTGCAACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTCCAAAAAATT CAGTTATTGACACCAAATATAGGTGTTGTTTATAGTGGCATGGGTCCCGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGCTGTGCAGTATCAAC AACTATATCAAGAACCAATCCCTGTTACTCAACTTGTAAGGGAAGTTGCTGCTGTTATGCAGGAATTTACTCAGTCTGGGTAATTATAATTACTTTCTAA ACTATCATCTCTTTCATATGCATTTGAGCACTTGATTTTACGTTTTCTACTTAAGCTTTGGGATTGTATTTTATCAATATATATTGTCCCTCCTCATAAA GGATACCCCCAAAATGTAAAGATGTTGAGTAAAATATTTAAGGATTTAATTTATGAGAAGTTTGCACAGAACTTCATTGTGGATCCTTTGCCTATTTTTG TACAAACACAGATACCCCCTTTTCTTCACATTTTTTCCCTTAATTATCTTTCGAGTTCTGATTTTTTTGTTGTTCTGATAGTGGTGTTAGGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45170; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_160161
| Blastp | Proteasome subunit alpha type-2-A from Arabidopsis with 93.6% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-2-A from Arabidopsis with 93.5% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G16470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443721.1) |
| Pfam | Proteasome subunit A N-terminal signature (PF10584.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |