| Id Trinity | FTRINITY_DN54723_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_160165 |
| Sequence | AAGTAGAAAAAGAATTTCATCAAACACCAAAAAAATTCAGTGTCTTAGTTCAGGTTTCTCTACCAAAAACATCATCGTTTTTTGTTCAGGTTTCCGTAAC GTATCATGGGTGATAGTCAGTACTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTAGTTCAGATTGAACATGCTTTGACAGCTGTTGGGTCTGG ACAAACATCTCTGGGAATTAAAGCTGCAAATGGAGTTGTTATTGCAACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTCCAAAAAATT CAGTTATTGACACCAAATATAGGTGTTGTTTATAGGTTTGTCTCTTTCTACATGTTTGAATCATTTGAGTTAATTATATATTTATATCATTAATTCCTTG TAGTTTGACGGTCCCTTCATATTATGGAATTTGGCGGTTTAGTTAGAATGCATTCTTAAACATGAGAGGCCTCTTAAGTTTCCTAGACACATAAAGATCT GAGACGGGAGGCAAGGCAGCTTCCTGAGGGAAGTGAGACACCAATTTTGAGGGAAAAGTTCTTTGTTGGACATAGAATAGAACTAGAAGTTCATGCTTGA AATTGATTAAATATTACATAGAAGATATTTTTTCAATCAAAATATTTTTCAATGTTTTGTACTTTTGTCACCGGCAAACTATTGCTTATGTGCTGTTGTA AATGTGAAGAAGTCTACCTAAATCAAACAATCATGTGGCAAACTAATGGTGTTTGTTGAGATATTAGCATATCATGGATAGGATTTCAATGAATTTTTTG AATGAGATTTACTGGATTCAACCTACAAACTAGAGGTTTGATGATGATTTTTTTCCTCGGGGAGGGGTGGGGTGGATAGGATTTCAATGGATTCTTATAA AGAGATTTACTGGATTCGTGCCACGACTTACAGGTTTGGCTAGGACATTTCTTTGGGAGGGCCGGGGAGTATGTGAGTTGTGAAATGGATGACTGCTTCT CTGGAAACACTTTGTTGTGAAATGAATACGGATGATGTTTAAAACTATATTCAAGCATTTAAAAAATGTCAATATATTAAACAACATAAATCACTTCCTT TCTGCTCTCTTTTTAATCTTTGAATGAGATAGACTGTCAAACTAAATTGTTTCCTTAGGTTTGTAAGTTTGTTTTTGTTTGAAACTTCATAAAACAGGGT GAGCCAGACTATCTTTCTCATTGCATTTGAGCTTTTTGTACATGGATGTGGTTATGCCTCCTAACTAGTATGCAAGTATCTTCTTGCCTTAACCTAAATT TTGTCTTTGTTGTTTAGTGGCATGGGTCCCGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGCTGTGCAGTATCAACAACTATATCAAGTACAGC ATATCTAAATTTTGTATCCCAATATCTTTTTCTTGGGTTCTGCATATACTTGGTGATTAGGATTCAGTTATAATGTTATCAGCATCACTTTGGACTTCGG GAATTTTAATTTTGTTGAACTATAGTTTCAATATTTGTTTTTGGGTCATGTCTAAATGTTGTTTTCACCATGTCTCATTCAAAGCATATCCATAGTGTAA GAAACAGCTATTCTAGGTAGAATGTATCAATCCCTCGAAATAAGCAGCACATACTTCCTGGCTCCTGCCCAAGCCTGTTATATTCTCCCTTACCATTACT TTTTGTTGCTTATTTGGAGGGAAAATGGGATTTAATAATGGGTTCCAACTCATTCCTTTTTAGCTGAATTTTACAACTCAGTCAGTGTATTATTGGGATT TAATTATTATCTTGCTTATGAGTTTGTTGCTTTTGTTAAGTGTGGGTTATATCTGATATTGTAAAATAAAATTGCAGGAACCAATCCCTGTTACTCAACT TGTAAGGGAAGTTGCTGCTGTTATGCAGGAATTTACTCAGTCTGGTGGTGTTAGGCCTTTTGGAGTGTCCCTTCTGGTTGCTGGGTTTGATGATAAGGGA CCACAATTATATCAGGTGGATCCATCAGGTTCATACTTTTCATGGAAAGCTTCAGCTATGGGGAAAAATGTTTCTAATGCAAAGACATTTCTTGAGAAGA GGTATACAGATGATATGGAACTTGATGATGCAGTCCACACAGCAATATTGACACTGAAGGAAGGATTTGAGGGACAGATCTCAGGGAAAAATATTGAAAT TGGCATTATTGGTGCTGACAAAAAGTTCAGGGTATTAACACCAGCTGAGATTGATGATTACTTGGGTGAAGTAGAGTAATGTGCAATGAAGAAATCCTTT ATGTTCCTGAAGTTGGTGTTTGTTTGACAGTTAAATTTAATCAAATTTCGAGAGGGATAGCTTAGATGAAGACTCGCAATGGCACTGGTAAATTTGTGAG CTGATCTTTGTACAAGGCATTCGAAAAGTCCTTTTCTGAATTAATCACTATACCCAAGCAAACCTACCTTGTTTGAATATATGATATGGCATGACTCTAT TGAATATCTCTATTCATTTTCTCTCTTCCTTTTATTATTCTGGTTGCTCCTTATCTATATTATTTTAAGTCTTTCTGGTTAAGCTAAATGTGCATCATAA TTATTATTGGCTTTGGGGTTAATTTTGTGATTGTTTTTCTTGTCATTGATCAAATTCTGTCATTTTTGCACCCCTTTGGCATTTTGTTACTATGTGAATA AAGTACTGACTCTCTTCAAATAATAACTTCCCAGACAGAATTGAGTATGAACTTATGATGTAGTTAGTATAATCAAATAATGTCCAGAGTGAAATAATCT GGAGATGTTGTACACTTGATAATGGATATGATGTACCTTGGTAATGCTAAAAGCTGTTTGTCACTCTTTTTCCATGTATTAAATTTAAGTTCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45170; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_160165
| Blastp | Proteasome subunit alpha type-2-A from Arabidopsis with 93.22% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-2-A from Arabidopsis with 91.79% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G16470) |
| CantataDB | Link to cantataDB annotations (CNT0001192) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443721.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |