Id Trinity | FTRINITY_DN54725_c2_g1_i19 |
---|---|
Name Transcript | Ll_transcript_160231 |
Sequence | AACATTTAGACAACATTTGCATATAATTACATTAATTATGTTTGTTTATATCACAATGATAAAATAATAATCACACGTTTGATGAAAGCAGTTATGGGAG TGTTCATATATCTAATTGAAATTGTTGTAATTGCAATGACGAGTGAAGAATGAAGCATGTAGTGTATGGCAGAGAGAGTGTCCACGTGGCAAAAACATAA CCTCATAGAAGAAAAAGGTAGAGTTGTTGCTTGATGTAGTAACTATGATGTCTGTCACAAACCCTCTGAATCAACAACTGTCATCTTTGCTTTCTCTCTC TTCTCTTCTCTTCTCTTCTATTTATAAATAAAGGACACTCTCAGGTGCAAATGCAGCATCCGGAGGAGACTTGACAATTGCTGCCACTGACCCCCTATCT GAAATAGTCTATTCTCAAGATAAAGGTTTGAGTCTTAAATGTGCCGATTCATGCTTTGCTGATAAAAATAATTCTCTTTTCACGGATGTTGGGCCGAGCT GTATCGTTCTTGCCCCGCCACAAATTTTAACTGGTATCATGCCACAGGGTGAAGGCAATGAAGAAAATGATACAGGGTCTGGTGGTAATATGGAGAAAAT GAACACTGCAGAAAGAGCACTTAATGATCAGCACGAGAATCTAATGAATGATTCACGGAAGAATACTTGTGATGTAGCCAACACTGGAACTGATAAAATA TTTGGCATAGAGGGTAACAATTTTTCTACTATTCCAGGTCAGGTTGACCAAATGGCATTTGGTAGTTTGTTACTTCAATCAGATGAACATAAACATAGCA TGGAGCAAAATCCTTCACCAAAGAAATGTTCCAATGAAAATATGGATATTGGCAAAGGAAAAAAGGCAGTTGTTATTGACGAAGCTTTATATGCTATGTT TGAGCATCCTCTAGCAGAAACTAATTTAGCATCCTCTAGCAGAAATCCTTTGGAAAAACTGGAATCAACCGCAGAAAATGATTTACAAATTTCCAACTTT GAAGCTGTGTATGTTGCGACAAGCGGAGTTATTGTTAATGAGATTGAAAACAAATCTCGGAACATTGAAATGATGCTACCATGTGATAAGATTCTCCCAC TTTCACATTATCCATGTCATAGCAGAATTCATTTGACAATAAATGAAGGCAAGGAAAAGTCCTTATCAGATGGAGATGCAAAGGTAAGATTGTCAGAGGA GGACAATGACAGCAATTCAAGTGTTGAAAGCTGTAACAGCACTGGCTCTTTCTCTACAGGTAAGAAGAGACGTAACCTTTCGCAACAGTTGATAATTGGA AGCAAAAGAGTCAAAAAGCAAATTGAAGAAAATATTGGTTGCAAGTCTTATGTTAAACCGGATAGCTCTTTCATGAACTGGATTTCAAATGTGGTGAAAG GATTACCTCAATCTATGCAAGATGTTCCAAACACTTCGGCTCATGCCCTTTCAAATCCAGATCCAAATGACAGACTTATCACATGCAATACAAATCAAGA TCTTGTGCCAAAAAATATAGGATTCAAATCCCTTTTTCAGTCGATATATTGTCCAAATTTAAAGAATTCAGGAACAAGAAAGTCTCATCAAGAAGGAGAG GGTTGCAAGGATATAGAGCCAGATTACATGGTACGTGGAATCGAAGCTAGTCCAATAACCTGTTGTGAAGAGAATAATAGCCTTCAAGGACGGTATTCGC AATCAAATAGATTTGAAGTTTCGGCTCAGAGATATGAAGCTGGTCCATCCTCACAGCCTATGATTAAACCTCTAGACTTTTCAAACAGTCATGAAAGTAC TAAGGACAAAGAAGAAATGGGACCACGTTCATCTTCAACTAGACAAAATACAAATAATACGGAGAATGTTGATTCAATTGCACTGTATGATAGAAGGGGA GCAGGGAATATCCATCACAAAAGTGATAATACTCTAGGGAGTCTTTGGATAACTCGATTTTCACCAAAATCCACTGCCCCCTTAATCATCTCTGACCATC TCAATGAGAAAGTTGGATCTCAAGTCCACACCACTGGTTCCTCAAAGATTCCAAATGATTCCAATAAACACATTTCTTACCTGAGAAACTGCAAGATTGC TAGAGAACAATCTGGTGATGAAATGGACGTTTCCGCCGGTCTTAAGGAAGATAAGGGAAATAGTGATCATAAACTAAAGAATAAGTTCAATCCCCTCTCA TCTTCCACGGGATTCAGAAATTCAAAGCCTATGACTTCTATGTTTGCTAGGAGGTTAGGTGCCAACAAACATATTATACATAGTACCACACAAGTAAATA CATTATGTTTGTTTTGTGGGACAAGAGGTCACCAACTCGGTGATTGCTCAAGTATTGAAGAAAGTGAGCTAAAAGATCTCCAAGAGAATATAAATTTGCA TGGAGAACTTGAAGAACTTCCTTGTATATGCATCAAATGTTTTCAGCCCAACCATTGGGCAATTTCGTGTCACGCCTCAACCTTGACAAGGAAACAAAAG TTGGAAGTCAATGCCTTGTTCAATTATCATATTCCTAGTGGAGAGCATATTAGTCCTAGCAATGAAAGGAGTACCAGGCTTCTAACCAGTGAGGATGACC AAATTTTATCTGGCAGTTGTAATATTGATGGAACTGATCACAAGGAGGAGAGAAATCTAAACTTGATGCGGAAATCAAATCAAGCCATAACCTCCAAGGC AGGGTGCTATGCTTCATTCAAGAAATACTGTAGTGCAAGTTCTGAGGAAAACAAATTCAAGGAAGATCCTGGTACATCTCCATCTAAATTGGCTGAAAGA CAGGTTTCACAAGTACCACAGAGAATCTCTGATGCAGTTAAAAGGCTTCGTTTGTCTCGCACTGACATCTTGAAATGGATAAACACTCATGAATCAATAT CACAACTTGATGGTTTTTACTTGCGCCTGCGGCTTGGGAAGTGGGAAGAAGGACTACGAGGAACTGGATACCATGTGGCATCTATAAATGGTATAAACTA AAATCACACCTTGTTCTTGGCATGTAAATATCCTTTGTTTATTTTACTTTACCACATTATACATATACCTGGAATGCTTCTTTAGTTTGATAAGGTGTCA CGAATTTGGTCTTCTCTTTTTCTTTTTTTGGGTAGAAATTATGACTTCTGTTTTTATACCTTTTATTTATTTTCTTTTATGTTATTGTTTAACAATAGAG GCTGAGATACAGTGTTCAGAGCAAAGTACAACAAAATCTCTCTCTGTGAATGTAAGGGGGATCAAGTATATGCTCGAAAGTCGGTATATATCCAATCATG ATTTTCTTGAGGTAACAATTCATTAGCTTTTCCGCTAGTTATATTGAAGCTATTGATTTCCTTAGTCCTTTTGAGTTTTTGACTCCATAAGCTTATGCGA AATTCAAGCTCTATTAAATTATCCCGGACGCGATAACATTCTTGTGATTGTGCTAGTAGTTTACTTCTTATTGAGCAATGAAATAGTTTTTTGGTTCCTG CTATATGCTGAGGGACACCATTAACATGCAAGATCACATATACCTTATATGTCATTTTGTAAAGAGTAGAAAAGAAGTATAGTTTTTAAACAAAATGATA CTTAAGCATAGCTGAATTGTTATGACTGCTTTGTTTGTTTATGCATACCATTTTATAAAGCCAATGGTGCAATGGATATCAGGTAAAGAGTGGAATCTTA CATTTAAGAATGCTGAACCTCATCCCATAATTAACAGCTCCAAACTAGCCAGGTCTAGTTCAAACCTCATAAAAGTGCGCTTTGGTCGGGTTAGGGCATT GCGGTAGCAAGAATTAATCACACAAGCGAAAAAGTAAGGATGTCGAACATTTCGTGATCCGACAAAAATGAGTCCAAGTCAAATTTACTTCATGTGCATT TCATGGATGGATTATGTATCTAATAATCAAAATATATCTGACATTGCTTTGTCTATTATATGTTATTTGCTTCATATTGTTTCCCCTGCTGGATTATCAT AAAATCTATTTTATGGTAGCATTGAGTCATGGAATGGTTATCTTATTATTTTATCCAACAACTGCTTCAACTTGACCTGAGCCTCTTATTTGTGTAGGAA GAAATCATGGAATGGTGGTGCACCACCACAGAAGCTGGTGCTGCTATTCCATCTGAACAAGATCTTAACAAAAGAATTGGAAAGAAAATAATGTTAGGTC TCTAGGCATTTATTATTCTAAGTGTTAATATTATTTATTGCTAGAAGGGTGAGTATACTCTCTCTTCTGCAGATAGATGAAGTTCTGTTTTCCTCATTTT TCTTATGCAATTAATTGTATATCAATGAAAGCTTTTCAGTCATCATGATTTCGTGAATGTCACATTCAAATAAAGAGTTTATGTTATTTCAACATCAACT TTTCAGCATCATATACAATAGTATTGTTTTATTTTATCTTTATCCCACAGTTTCAGAAAAAAATTATTGTTCAAAGAATTACTCTATCTTATGAAATGAA AGTAATG BLAST |
Tissue | flowers |
Gene name | LI_gene_45176; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_160231
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422004.1) |
Pfam | Zinc knuckle (PF14392.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |