| Id Trinity | FTRINITY_DN54728_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_159393 |
| Sequence | GAGATAAGTTCAAAACAGAAGTAGCAATAATGTCATGAATCCAATTTATCCAAAGAACCAACCTTTCACTTTCACTACTTCACACGATAAATCATAATCA GCATGATTCATCTTCTCTCTCAATCATCGATTCAACTTCTCTCTTTTTCCCAAAAGGTTTGAGATCAGAAAAAAACATATATAATTATATCACCCACTCT AAGTTATGTACTTGATCTGTATCTGCAATTCAGCATTTGTTTAGGGTTAGGGTTTCAGCATCGGTAGGGTTTCTCGGATTTTTTCTAAAATTCCTTTTGG GATTAGTGAAATTCGAGGAAAAGGGTGTTTTGGGTTTGTGTTTGATTAGTCAATTAGCGATGCAATTTAGACGGCACGAAGAAGAGCATGTTCCTGCTGC ACTGTCTCCTTCAAAGTTGCGATCTCAGCACCGGTTCGGACCGGGTCCTGAGCCGAACCAGATGAATCGCCGCAATGGTTTGGATCCAGTACAGCAGAGG AATTTAAGTCCACGGAAAATGGATGAAGTAAGAAGGGGGTGTGATGGGTTTGAAAAGAGGGATTTTGATTGGCAATTGGGTGGCCGTAGGAGCGGTAGGT TCCGGCAGCAATTACCTGTGGATGAAGAATTTAGAAAAAAGTCACATTTGGGATTGAGACCAAGATATGAGGTGGCAAATTCCATGGATTATGTTGTTGA TGATGAACATTTGAATGTGAAGCACAGTTATGTTAATAGAGAGAAGGATTTGATTGAAAACAGGTTAGGTTGTGGAGTGGATATGATGGATCATAAGTAT GTGATCCGTGAAGATGAAGCGAGAGGTTCATATAGCTCAATTCCAGATATGGGTGTAAATGTAACATCACGATATGAAGAAACTGGTGGGCACTTGCCTC GGCCGCCAAGGGGTATTCCCATGGGGAGATTTGACCATGAAAGATTACAGCACCCAGAATCTCTACCTATGGATAAAATACCCATCACTGAACCCCACAA TGAGGCAGAAAAAATAATATTTTATGACAGAGATGGCTCGTACGCGACAATATCCCCCTCATACACAAAGGATTTTGCAGGAACTTCTCACTCGATGGAG AGGGATTATGGAGGCTCCTCTGTAGAAATGTCAAGGAGTCATTTTCGATGCTCGCATGGTGATGACATATATTTACCTACACCTTATGATCTGTCAAAGA GCGGCACAGAATTTGCAGAACCTGTAGGGTTTAGCGAACACGGGCAAATGCCACTTGAAGACACTACTAGAGATCCTGAAATTAGGCATAGAAATATGAT GTGTCACCAAGGATGTGAGTTTGGTCCTACCAGGACTGAGCATCAGGATTATCTTAATAATTCTAAAATACCGGTAAGAGCGTCACAGGATGAGGGTGTA TATCAGTATGATGATTTACCAAGAAGGATGGCTCCTCATGGTCGATTAGACTATAATCATTCTCCAATGGAATATGATGATAAAGAGTTGTGCAGAGCTT ATACCTCATATCCAGATTTAGATATAACTGGTAAGAGTGAAGATTCATATGGCAATCAAAGAAAGGGTGTTATACGTGACTACCCTGTATTACGGAAGCC AAAGTATTTCGACTATCATGACATGAGAAAAACACCAATGGTATCAACACCCGATGAGGCGTATTTGCATTCTGGATATAGTCATCTTGAAGGTAACAGA ATGCCCCAAGATTATGAAATTCCATATCCGCGTGCACCTGAGGCTGACCGAGCATCAAATTTAAGATCACATTATGAATCTAGAAGAGATGGAGCCCCAG GGCTTCGGAATGAAAGGTTTCAAAGTTCATCTTTGTCTAAACATAATTCAGAAACCCACAGGCTAGCTGCCAGAGTGAAGGAGATGAAACTGGATCTTGA AATTCATGATCATGACCATTCAGGTAGATTTATGAAAAGAAAATACTATGCTAATGAAAATATAAATGTGCATGATTCGAGAGCAGTAAAAGCAAGGAAA TGGGATGCAACTGAAGAATTTCAAGATATATATGAAAATGAAGAGTGGGTAGATGAAGATATGAATATATTGTGTTCAACTGCTAATGTTGGATTCAACC ATAAGACATACCGAAAGTATAAGAGAGAATACAATGAATTGGATAATGAAGAAGATTTTCCATTTGATGAGTGTACATTACCTCAAGATTCTGTGGGACA TAGACAAAGGCAGTCATTTCAGTTTCAGAAGTATCCGAATCATAATATAAAGCATCATTCGAAGCCTAGTTCTTCAAGCTGGTATAAGCCCCAGCACTTC TCTAAAGGAAATTTGATTAATAAACATCCTAATGTTTGGAAAAAGCATAATGGTTACCATGACAATAAGCATACATTTAATGATGAATCATCTAAAGAAT TGTTAAGTGCCACAGAATCTGAGACAGCTGAGGGTTCTGAGGAGTTTAAACAAATGGTACACAAGGCTTTCTTAATGTACTCTAAGAATATGAATCTGAG CTCTTCTCTCCAAAAAAGCTACCAGGAACAAGGAAAAGCTGGTAGTTTTTATTGCACCGTATGTGGCAAAAGCTCTTCGAAGGATTTCATGGACACTCAA CGCCTAGTAACTCACGCTTTCATGTCCCACAAGGCTGGCCTGAGAGCAAAGCACTTGGGTCTTCACAAAGCAATTTGTGTCCTGATGGGTTGGGATACTG TTATTCCTCAAGATACAGTAACTTGGGTTCCCCGGGTCTTGCCTCATGCAGAAGCTTTGGCGCAAAAGGAGGACTTGATTATCTGGACTCCTATTGTTAT CATACACAACATATCGATGCATGATGACAATCCACAGAACTGGAAGGTTGTAAGCATGGATACAGTTGAAGCCTTCATAAGAGGCAAAGGATTTGCAAGA GGAAGAATCAAACTTACCTTAGGGAAGCCTGCAGATCAAAGTGTTATTTTGGTGAAGTTTCTGGGTACATTTATTGGGCTGGCAGATGCAGAGAGGCTTC ATAAATATCTTTCCGATAATAATCGCGGTAGAGCTGAATATGAAAGAGTAAAATCTGAAGGTATAAAAAGTACTGACATTAAAGACAAAGATGAAGGAGA CAAAGTGGAGAATATTCTGTATGGTTATGTGGCAATTGCAGAGGACTTTGATAAACTAGATTTCAGTAGTAAGAACTGGTGCTCAATAAAGAGCAGGAAG GAGATTGAAGACTTGGATAAAGATCCTGTTAAAACTGATGAGAAGTGATAGATAAAAATTATGGTTGAAGACCCTTTCAGGAATTTAATGGTTGAGTTGT TAAAATTTGTGTTCATCTTATCATTACCATTTATTCTCCATCTAGTTAATTGCTATCACCACAACAATCCCATAATTATGTCTACAATTGTATAGTTTGT ATTGATCAGTTGAAAAGTTTATTGACCAAATTTGATGGAACAATATTATTTTTTTGTACTATTAAGGATATCTTCACGCCTTTTAGTAAGGAACTAATTT CTTTCAGAACTCGTGGTTGTCTCTCCCTATAAGTTTCACGCCTTTTGGTAAGGAACTAATTTCTTTCAGAACTCGTGGTTGTCTCTCCCTATAAGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45204; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_159393
| Blastp | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 24.88% of identity |
|---|---|
| Blastx | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 24.64% of identity |
| Eggnog | Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45) |
| Kegg | Link to kegg annotations (100134882) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428430.1) |
| Pfam | XS domain (PF03468.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |