| Id Trinity | FTRINITY_DN54731_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_159037 |
| Sequence | CTGTGACACATTTTTGTGCAATGTACTAATCGACATGTACGGGAAGTGTGGAAGCGTTGATAATTCAGTAAAAGTTTTCAAACAAATGGCATACAGAAAT GTCATTACATGGACAGCTTTAATCACTGCCCTTGGTCTCAATGGTTATGCTCGTGAGGCACTAGAGAGATTCCAAAATATGGAATTGATGGGATTGAAAC CTGATGCATTAGCTCTGAGAGCAGTTCTTTCTGCTTGCAGATATGGTGGGTTAGTGAGTGAAGGGATGGAAATATTCAGGCACATGGGAACTAAGTATGG GATTCAGCCAGAAGTTGATCACTACCATTGTATGGTAGATCTCCTAGCTAAAAATGGACAGATTAAGGAAGCTGAAAAAATCATTGCAAGAATGCCTTTC CCACCAACTGCCAATATATGGCGTAGCTTCCTTGAAGGCTACAAGAGGCAAGAAATTGCAAATTGACTTGTACAGCAAAACCTGATTTTATGTTGGCAGC AATGAACATGTTTTATAGTTTGGTTTTGCAATCTCCTTCAACTCTGTTGTGCAATGGCTCATATTTTCTAGATAACAGCAATACAAGCTATGGGCTTGAG CTGATGTAATACATAGTGGTAGCCTCTCAAGGCTCCCGAGGACGTAGGCACAATTGGTCAAACCTCGTTACCAAACTTCTTGTATTATCTCTTTCCTCTA TTCTCTTTTACTGTATGATTGTCCGCTTGTTCCCAATAGTTATAACTTATAAGAGAATGGCTTAATATGAAATTGAAGGTTTTGTGTTTGATATGATTAT CAATTCAGTATACACAGAGAACCCAGAAATGTGTGTGTAGAGTATTCCACTAGTTTTTTTGATCTAGTATTCTAGTATAGTAATGTCAACAAACCAAACG CCCCTACAAGAAGGGTTTTATCAATTATTGCTCAATCTCATAGTCCTCTTGCTAATATAGAATTGTACATATAATGATTCTGAAAAAAGTTAGACACATT ACTATAGTTAGAGTATTATATTTTGACGGATACAGACTTGTTGAAATTGAAACTCTTCAAAAAATATATCACATACACACTAGTTTGATAAAAATGGAAG GTTTTTATTTTGGGGGACTGTAGATCTTCAATGGTGGAATCTGTTTGCCGCCTTCACCTATGAAATTCTGATATGGTTCATTGCGGTTATTTGTATGCTG CATATGTGCACTGCAGGATCACCGCAAATTCCAGCAGCGTTACTATGAGTTCCTCGACTATTTCCAGTTTCCAGATGGACCAATTTTTTTGGTAATCTGC GGTGAATATTCATGCAATGGGATAAAAAATGACTATATTGCTGTTCTGGCAAAGAAATTTGGAGCTGCTGTGGTTTCTCTTGAGCATCGCTATTATGGAA AGAGTTCTCCATTTAAATCTCTGGCAACAGAAAATTTGAGATATCTTTCATCCAAGCAGGCACTCTTCGATTTGGCTGTTTTTCGCCATTATTATCAGGA CTCCTTAAACTCAAAGCTTAATAGAACAAAAGCTGAAAATCCCTGGTTCGTTATTGGTGTTTCATACCCTGGAGCACTCAGTGCATGGTTCCGTCTTAAG TTTCCTCATTTAACATGTGGAAGTCTTGCAAGTTCTGCAGTCGTTCTTTCTGTTTATAACTACACGGAGTTTGATCAACAGGTTGGTGAGTCAGCAGGTG CTGAATGTAAAGCAGCATTACAAGAAACTACTCAACTTATTGAACAAAAACTGGCAACCAATGCAAAGGCATTGAAGAAATCTTTTAATGCAGCTGAACT TCAAATTGATGGTGACTTCTTGTATTTTTTAGCTGATGCTGCTGCTACATCGTTTCAATATGGAAATCCAGATAAAGTATGCAAGCCTCTTGTTGAAGCA AAGAAAGCTGGAGAGGATTTAGTGGATGCTTACGCCAAATTTGTGAAGGAAACCTTTGGTGATAGTGTACAGTCTTATGACCAGAAGCACTTGAAAAGCA CAGCTGTCAGTGATGACAATTCTGATAGACTATGGTGGTTTCAAGTTTGCACTGAAGTTGCATACTTTCAGGTGGCTCCCTCAAATGATAGTGTGCGCTC CTCAAAAGTTGACACAAGGCAATCTCCTCATCTCCATTTTTAACTTCATATACTCCTCTTTATATCCCGGAAACAACCTCTACTCTTGCAAGGGTAATGT TGCGTACATCTATCATCCTTAACCCCACTAGGTGGGAACCTCGGGCATTAAGCCGCTATTATACTCCTTTCTTGTCAAGATTCTTTTCCTCTCTTTTGTA TATATCACTATTAGCCTGTTACCCTATGGTTTTTAATATTTCTAGTTCTTGCATAATTTTTCACCATAATCTTGTAAGGTTATGCAAAATGGTTTCTCAT ATATCACAGATATCATTTGGACCTTTGCAAAAATGTCTTTGGAGATGGCGTCTTTCCTGATGTCACTGCAACTAATATATACTATGGAGGCACAAAAATT GCTGGTTCGAAAATAATATTTACAAATGGCTCACAGGACCCGTGGCGTCATGCATCAAAACAAACTTCATCCCCTGATTTGCCTTCCTACACTATCACAT GTCATAATTGTGGCCATGGAGTTGACATACGAGGATGTCCTCAAGATCCTTTTAACCTTGAAGGTGATGAGAAGAAGTGCACGATCCCAGATGCAGTTCA CAAAGTAAGGCAAAAGATGAAAGAGCATATGGACTTGTGGCTATCTCAGTGTCAGAGCACAAGCAGGAGTTGTATATGAATATTTGTATATAACGAAGGT GCATGACTTACCACAACACCTTACCCTGATATTGCCTATAACAAACTCCACCAAGACCAAGTATACTGTTGTGAATCACCTTCGTGTAATTTACAAACTC CACCAAGACCAACCCATTTCAAATAAATTTACAATTTCTATCTACTCATAAACAGCCTTAATAGTTTATAACTATTGTAAGTTCTTATTTTGAAATTTCA TCAACAACAATTGGTCATATACATCGTGCTTATAAAAACAGTACGGCTGATTCAACAGATAAATTGGTACAGTGAACTTTATACTAATACGATATAAGTC AAAACCATATCTGAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45227; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_159037
| Blastp | Pentatricopeptide repeat-containing protein At3g58590 from Arabidopsis with 56.08% of identity |
|---|---|
| Blastx | Probable serine protease EDA2 from Arabidopsis with 66.78% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT3G58590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004512112.1) |
| Pfam | PPR repeat (PF01535.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |