Id Trinity | FTRINITY_DN54743_c0_g2_i11 |
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Name Transcript | Ll_transcript_159698 |
Sequence | CTATGATCAACATGATACACTTGGCACAAAAACCCTAACTCTGCAATTCCATTTTATTTTCACCTCAAAAACCCTAGTTCCCAGCAATTCCATGAACTAG ACCTAATTCTTAATTGTTTCAAGGTAATGTCGCTCCAAGGCAGCAAATATGACCGCCCGGAAGCTCCCTTGCCGGCAACCGGGGGAAACGGTGCTGTCGC AGCTGGAAACAAAGGAAACGGCACCGTTTTGTCGAGCCCTAGTCTGAGATTGAACCCTAGCCAGGAGCACAAACCAGATGATTACGAAGATATGCAATTG GAATTCAGCGCTGTACTATTGAGCTCCCTTGAGAAGCACCTTCCTCACACCATGCTCAGAGATCCTCGCGACCAAAAGGCCAAGTTCATGCAAGACATTT TGCTCAAGTATCTTCCACCCAGAGAACGTAACAGAGCCATAAAGCACAGAGAATATAGACAGAAGATAATATCAAATTATCAGGTAAAGTGCAACCAAAT TTTGATTTTTTACTATTTCTTTTTGGATGCTTTTGTTGACCAAAAATTGTTGTTGAGCCTTGAAGAATAATTTCAGGGAGATATCAAGGGGAAATAAAGA GAAAAGâBLAST |
Tissue | flowers |
Gene name | LI_gene_45309; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_159698
Blastp | Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 46.24% of identity |
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Blastx | Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 44.66% of identity |
Eggnog | Procollagen-lysine 2-oxoglutarate 5-dioxygenase(ENOG410Y4QU) |
Kegg | Link to kegg annotations (AT1G22950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457735.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |