Ll_transcript_157889

• Id Trinity: FTRINITY_DN54752_c1_g1_i1
• Name Transcript: Ll_transcript_157889
• Sequence: GAAAGGCCCAGGTCTCTACTCCGATATTGGCAAGAGAACCAGAGGTATTTTATTTCTTTATTTCTCTCTATTTTATTTATCTCTTTCATTCACTCTCATC TTTTTTCATTTTTCATTTTTCAATTTTCAATCTCTCTCTCTTGTTCCTCCCAACCACTCACATTTCACCAAATGGCCCAATCCAGCGACTCCAACTCAGT CCCGAACCGTCGTCTCCCATGCGACTCTGACGGCGTTTGCATGCTCTGCAAGACCAAGCCAACCGCCGTCGTTGACACTCTGACCTGCAACACATGTATC ACTCCTTGGCACCTTCCCTGTCTCCCTCTCCCCGATCGCCCTCCCACCATGTCCGACGCTCAGAATTGGTGCTGTCCTGACTGCGCTGCTCCCGCCGCCG TCACCCACCCTCTCCCTCACCCTTCCTCCGATGATCCTTCTTCTCAACTCATGGCTTCTATTCGGGCCATCCAGGAGGATGACTCTCTCACTGATCAACA AAAGGCCAAGAAGCGTATGGAAATCATGCTCGCTTCCTCTAACATCGCTGATTCTAGTAACCCCTCTTCTTCTGCGCCTCCTGGCGTCAACGCTGCGCTT GATATCTTTGATGGAAGCTTCAACTGCTCTATTTGTATGCAGCTACCTGAGAGACCTGTCACGACACCCTGTGGTCATAACTTTTGCTTGAAGTGTTTTC AAAAGTGTTTCTCACAAGGCAATCGAACATGTGCTAATTGCCGTGGCGCAATACCGCTCAAGATGGCCACCAATCCTCGCATCAACTCCCAGCTTGCATT TGCCATCAGATTGGCAAAGATGGCCAGATCTGGCTGCGCCGTTCCTGCGGGTGTTCCTAAGGTATACCATTTTATCCACAACCAAGACCGTCCTGACACC GCTTTCACCACCGAGAGAGCAAAGAAGACTGGATTGGCAAATGCCTGCAGTGGGAAGATCTTTGTGACCGTTCCCCCGGACCACTTTGGTCCCATCCCTG CAGAGAATGACCCAACAAGGAACCGTGGTGTTCTTGTGGGAGATACTTGGATGAACAGGATGGATTGTAGACAGTGGGGTGCTCATCTTCCCCATGTTGC TGGCATTGCTGGCCAGAGTGCTTATGGTGCTCAGTCTGTTGCCCTCTCTGGGGGGTATGTTGATGATGAGGACCACGGCGAGTGGTTCCTCTACACTGGC AGTGGAGGAAGAGATCTTAGTGGCAACAAACGCACAAACAAGAACCAGTCATTCGATCAACAATTTGAAAATATGAATGAGGCTCTCAGACTAAGTTGTC TAAAGGGCTATCCGGTGCGTGTTGTAAGGTCCTCCAAGGAGAAGCGATCTGCATATGCACCAGATGAAGGTGTAAGATACGATGGTGTCTACAGAATTGA GAAGTGCTGGCGCAAAGTGGGACAACAGGGTTGCAAGGTCTGCCGGTATTTATTTGTGAGATGTGACAATGAGCCTGCACCATGGACAAGTGATGAATGT GGAGACAAACCGCGCCCACTGCCTAAAATTAAGGAGCTGCAGGGTGCAGTTGACTTAACCGAAAGGAAGGCAGCTCCATCATGGGATTTTGATGGGGAAA AGGGCTGTTGGTTGTGGAAGAGGCCTCCACCAGAAAGCAAGAAATCGGCAGGCACTGTAAGCCCTGTGAAAGGACAAATAAGAGCGGTTAAACGAAAAGT GAAAGTTGCATCTGTAAAAGACAAACTCCTGAAAGAGTTTGCTTGCCAAATCTGTCGCAAGGTGATGTGTAACCCTCTAACAACACCCTGTGCTCATAAC TTCTGTAAAGCCTGTTTGGAGGGAGCATTTTCAGGCCAAAGTTTCATCAGAAAAAGGGCTGTCCAAAGTGGACGTTCATTACGTGCACAAAAGAACGTCA TGAAATGCCCATCCTGCCAAAACGACATAGCTGAGTATTTGCAGAACCCACAGGTTAATAGGCAAATGATGGGTATCATAGAATCACTCCAGTCTGAGGC TGAACAGTTGGCGGAGAATTCTTCAGAGTCAAGTGACAAAAATGATGAAAATCAGAAGAATGAGAGTGATGTTTCGGAACCTTGTGAGGAGGAGGAGGAT GGTGATGATGATGATGATTCAAGTGAGAAGGTCCTGGAGGAAGTTAAGGACAATGATCTGAACTTGCCACCACAGAAGCGGAGGAAAGTGGCTAAAGGTG CAGTTGTGGTGACCGAAGAGGAACACATTGATGAAGTTGAACAAGACAGTGTGAAGGCTTGCGCTTAAAAAGGTTGGTGATGGGTAGCAGTGAAGTTTTT TGGATGTGGTCATGCGGTTGTTGCAGTGAAGTTTTTTGGATGTGGTCATGTGGGTGTTGCATCGCTCATGTGAATTGAATTATTTATAGCCTTATTATCT CTCAGACATGAACTGAAATATGTCTTTTTTATAATTTTTCTTGAATTGGCAGTGCATAGTTTTCTGAACTTTGGAATGAGTAACTGCTATGTGTAGCAGT AGGTTTTCTTTTTGTCAAACTAAATGAAATGAATGAATGCATTTTGTGATGTTATGCAATTCTTGTTCCTCATATTTAGAATAATAATCAAGGGAATTGA ATCACTGCCACCACAAGGAGGATGAACCCTCTCCATCTCCATTAATGGAGATAAGTTC
• Tissue: flowers
• Gene name: LI_gene_45359;
• Additional information: details;

Expression of Ll_transcript_157889

FPKM

• FPAB: 4.5
• FPNAB: 7.2
• LF1: 4.1
• LF2: 4.3
• LF3: 7.7
• LF4: 11.2
• UF1: 4
• UF2: 3.5
• UF3: 7.4
• UF4: 8.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_157889

• Blastp: E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.71% of identity
• Blastx: E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.66% of identity
• Eggnog: ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440)
• Kegg: Link to kegg annotations (AT1G57820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435773.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;