Id Trinity | FTRINITY_DN54760_c1_g1_i15 |
---|---|
Name Transcript | Ll_transcript_157964 |
Sequence | TCTGTCTCTAAAACCTAAAAACATTGCAACTGAAAATGGTGCAGTGAGTGAATGTGAAACCCAACAAGGTTCAAACCCACATTTCACCATCACATTCTCA CTTCTTTTGGTTCACTTTCTGCTTTTTACTAATCTTTATCTTTTTATTTATTTATTTATTTATCGCTCAGTGTTAACTCTTTGTTTTACATGATAGATCA TAATTTATTGACTCGGAGACAAAAAGCATGTGGAGTTTTTCATAAAAAAAATTGTAACTTTTGAAAATGTAGATTGTAGCCTTTGAAAGCTAGCTTATTT CAGAAGCTATAAGCTGTTTCAATAGTGAATGTCTCATTTTGTCCTTCAATTTTAAGTCAATGTAATATTACATGCCCTTTTAACTTTTAAGTCATCAGCT AGTTGCAAAATTGATTTTACTCATTTTACCAAACAATTCTAATTCAATACGCTCGCTACACAAGTGAAACCCTTCACCTAGCTTCATCTCTATAAGGCTA TAAGCTACAATTCTAATTCAATAAGTTACTTTTGCCAAAGAAAACCTTAGTAGGTGTAAACTTCAGTGTTTATTCTTCTTCCCAAACAAGGTTTTAGATT CATGAATTCTCTGAAGTTTAATTCTGTGGGGGGAGCATGTAGCAGAAGTAACTGCTGGCTGATCATAAATGGCACCCAATCCAAGAGTAGTAGCGGCCTG TGATGCAATGGCAAATCTTGGGATTCATATATCAAAAGTGAAGCCAGTACTAAAGAAACTCCTGAAATTGTATGATAAGAACTGGGAACTTATTGAAGAA GAGAACTATAGAGCTCTAGCAGATGCAATATTTGATGTGGATGAAGATAAGGTACCAGAGGTTCATATAAAGAAAAACAAGAGAGTTGATGAAGGAGGGG CAGATGATGAAGAAGCTCATCTGCATGATGAGCCATTGCAACCTTTGAAGAGATCACGTTTAAGAAGACAAGAGGCTCAATCTTCACATCCGCTGAGTAG CTCTGGCCCCAGCTCAGCTGCCTGTTCATTGAAAATACCTAAACTAGAAGATGGGATAGTACCTGAGAGTAGTTCTGAACCGCAGCATCGAAGCACGACA GTGTTATCAGATGGAAATGCACGAAATGAAACACATCAACTTCCACCACGAGATGGCATTGTTGACAAGGGAGAGCAACCTGTATCACCTCATGTTACTT ATAGAAGGAGAAGGTTTACATCTGAAAGAGCAACCCCAGCAGTGCCCTTGATCATACCCAAGGATGAGCCTATCAATGACTTGCCAGATTTTGTATTTCC CCTTACAATGATTCTTCCTGAACAATCAAGAAGAAGGGACTCTTCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGGGTTGCCA TGCAGAGATAGAGAAGTTGGAGCTCAAGATATTCTTCCTTCCTCACATAACGAAGTGGCTTCTAATGTTGAGATAGCCTCTCCGGCTGTGGGAGAGGTAA CTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCAATGCAGGGATGGAGAAGTTGGAGGTGAAGATATTCTTCCTTCCTCACATGAAGAAGC AGATCCTAATGTTGAGATAAACTCGCCTGCTATGGGGGAGGAAGGACCTGCAATGATAACACCAACTGTTAACATGTCAATGGAGCCTGGGGAATTTGAG CCCCTGCTTGTCGAAGGAAATGAAGATTCTGTTATGCCTTGCATTTCAAATGGATCAATCGATGATATGTCTTCTGCTGACTTGGTGGCACCTCAAATTT GTAGTTCCAAACCCTGCCCAAGTGGTCTGGGTGATGCTGTATTGCTTTCCAAGAAGTTTGGAACTAATGATTTCATAGAAAGTGATGATGGAGCAAAGTT GGTGTGTGTTGTGAGTCCTAATTCACCCAGTTTAACACTTGTTCCAGAGCATCATCCTTCAAGTGAAATGAAGACTTCTCAAGATGTTAATGACCTAATG AAGGGAGAAGAAAATGTGAAAATTTCATGGGTGAATAATACTAGTACCGATTGCCCACCACCCTTCCACTACATACACCGAAGTGTTGTGTTCCGAGATG CTCATGTCAAGATTTCTCTATCACGTATTGGAAATGAGGATTGTTGTTCCACTTGTATGGGAAATTGTGTGTTGTCATCAAAACCATGTTTTTGTGCAAA TAACACTGGAGGTGAATTTGCATACAATGCAGAAGGCCTACTGAAGGAAGAGTTCTTGAAAGAGTGTATTTCCATCAGCCACCACCCTCAACATTATTTT TATTGCAAAGACTGCCCACTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCA AATGTGGCTGTAGGAAACAGTGTGGCAATCGTGTTGTCCAGAGAGGAATAACTTGCAAATTGGAGGTGTTTTTAACTGCAGAAGGAAAAGGGTGGGGTCT TCGCACCTTGGAGGACCTTCCACAAGGGGCATTTGTATGTGAATTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGGAGGACCTTGAAATATCCC AAAACTGGGAAATGTCCCTACCCAATTCTGTTGGATGCAAATTGGGATTCAGGAGTTGTGAAGGATAAAGAAGCTCTTTGCTTGGATGCAGGATCATATG GAAATGCTGCAAGGTTCATTAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCTGATCATCAGTACTATCATCTTGC CTTCTTCACATCCAGAGAAGTAGTTGCGCAGGAAGAGCTTACATGGGATTATGGCATAAACTTTGATGACCAAGATCAGCCTGTTGAGCTGTTCCAGTGC AGATGTGGCAGTAAATTCTGCAGGAATATGAAACGGTCAAATAGGTCCACTAGATCATCAATTGAAAGATGATAGCCATTATCTGTTGAAATTTGTTTCA TGCCAGACAATGCCATGGAGGAGTTGTGACAAGACCAAACTCAATGAATTAGTCTCTTTTTCTTATTGTTTTGCTAACTTTGTTCAGCCATCTGAGAATT TTTATGCAGACATAGCCAAAAAAACAAGATAACCTTTAGTGGGTAGCAAATCTGAACCTTTGGTGGAGGGGTTTATTGAAACGCCCAAGGATATTTGTGT TTGGACTTTGGAATTCCATGTTGTCCTCAATGCATGACACACTAATTGTTAACAACACTTTTTTTGGTTTTGTTGTATATGTTATTATTGAAAGGTAGAA AAGGTAATAGCCCATTTTGGTATTTGCTAGGATGAGAAATGAGAGCAACTAAATAAAGTGGTGTCCCTTCCCAAAATAAAAGCTTCAAGTTAACAACAAA AAGGGAGAATGGAAAAAGATGCCAATAGAGTATAAATCATTTCAACTCAACTCATTAGTAACTGCTTATTAGCACCAATTTTTCCATTATGGGATTGCAA TTGATGCTGATCTAGTTGATCTTGCATCATGATTCATGCATGATTGGGTAAAAGGAAGTTAATAAATAACTAAGTTGACAGAAACTCATAACGGGCCTTG TGTTAGAGAGTTATAAAGTGGTCTGATGGTGGTCGTAAAGACCAGAGTGCAGGAGGTTGTGGGTTTGAGGAGGTTGAGGTGATATATCACCACAACAAAT TATTAACGTACTAACATTTACATTCTAAAAAATTGTCGATAAAAAAAAAAAGACGGGCCTTGTGTTATTGAAGCGAAACCAACTAAAAAACAAAAAGCCC ATAAAGGCCTGAATTGTTGAACCCTAGTCTCAGTTTCTGAATAGTTTCATTAACCTAATAAAAAAGTCTCACTGTTTTCGTTTCCTGCTATTGAATTCTT CAATTTCTCATTTTTCTTTCAATCTGCTTTCAAGTGATTCAAATAACCTTATCACTTATCTGCCTCATCAATACCTTTTCATCTTCTTCACTTTATTGTT ACCTCTCAAAAACCTCGCTGCATTCACATCATTTCTCACTTTTTTGCTTAAAAATTGTTACTTTTACCATTTTTTGGTTCTGTTGCATCGATGTTTTCAA TGTCTGGATAACCCTTTTGATTCTTCTGTAAGAGGGTATACTTTGTTATCCACTTAATGAAGTGATTAAACTTGTGAATTTCTTGCAGGCACTGACCTAT TTTGATATGAATCAATGACATGAAGCTATTATCAAACTTCAGATACAACATCTTCAATTATGACTCTTTAACAATATCATCCAACAATTCCTTTGGATTA TTCAACCGTTTCATTCAAAGGAGATGGAAAAAACCAACTGTTTCTGCTCAAACCCGTTTGGAGGACAGAGTGAGGGACCCACACCTAGACAACTTCATGG TCCACCTTAACAAACTCAAATGTATCCTCAAAATGCACCACCTTATGTCAAGCCGAAAGCGCGGTTCGTTTGTGTCCTTACAGCTCATGTCTCGATGGAG GAACATTGTTGGACTAAATGTCACCATGGGGTCCTTTATTTATAGATACCCTCATGTTTTCGATGAATTTGTGCACCCATTTCGGAGGAATTTGTGTTGT AGAGTTACTCGAAAAATGAAGGAATTGGTCATGTTGGAAAAGGTTGCTGTGAAACAGCAGGAGATGGAGGCTGTGAAGAGGTTGAAAAGGTTGTTAATGA TGTCTGTGAATGGTACCCTTCATATTCACGCGTTGAGGTTAATCAGAAGAGAACTCGGCCTTCCCGAGGATTTCAGAGACTCAATTCTTGGCAAGTATAG TGGCGACTTCAAATTGGTTGATTTAGAGATTGTGGCATTAGTTGATAGAGATGATGAATTGGGAAAGGCAGAAGTTGAGAAATGGAGGGAGAAAGAGTAT ACAGAGAAGTGGCTTAGTGAATTTGAGACCAAGTTTGCTTTTCCTATCAATTTCCCAACAGGGTTTAAGATTGTGGGAGGCTTTAGGGAGAAGTTGAAGA ATTGGCAAAGGCTTCCATATGCAAAACCGTATGAGAGGAAAGAGGTCATTCGGGTTCGATCGTGTGGTGGGGTTGAGCGCTACGAGAAGAGGGCTGTCGC TGTTCTTCACGAGCTCTTGAGCTTGACCATAGATAAGATGGTTGAGGTGGATCAACTGGTTCATTTTAGAAAAGACTTGGCTATTGAAGTTAATATGCGC GAATTGCTGCTTCGGCACCCTGGAATATTTTACATATCTACAAAAGGAAAAACACAGACAGTTTTTCTTAGAGAGGCATATAGCAAAGGGAGATTGATTG ATCCTAATCCCATATATATTGCACGTAGGAATATGTTGGAGCTTGTATTATTAGGAAGGAGAAAAACTAAACAATTGTTAGGTTGTGATAATGTTAAGGA AGAGAACAATAGTGTAGTGAATGAAGTAGATGTTGAAGGTAAAAGACAAGGAGATTGGGTGATTCCATTTTTGGAGAGTTCTTAAGAGAATAGATCAACA TATTTGAAGAGCTTATATATTCATTTGATTATTAGCATATCTTTTTCTTTTGCACCTTGTCCTTATATTTTTGAACTTGTCATATTCATATATAATATAT TGCTAGACAAGACATAATTAAAAAAAAAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_45430; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_157964
Blastp | Probable inactive histone-lysine N-methyltransferase SUVR2 from Arabidopsis with 38.19% of identity |
---|---|
Blastx | Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 51.67% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT5G43990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429978.1) |
Pfam | Ubiquitin-binding WIYLD domain (PF10440.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |