Id Trinity | FTRINITY_DN54760_c1_g1_i21 |
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Name Transcript | Ll_transcript_157971 |
Sequence | TCTGTCTCTAAAACCTAAAAACATTGCAACTGAAAATGGTGCAGTGAGTGAATGTGAAACCCAACAAGGTTCAAACCCACATTTCACCATCACATTCTCA CTTCTTTTGGTTCACTTTCTGCTTTTTACTAATCTTTATCTTTTTATTTATTTATTTATTTATCGCTCAGTGTTAACTCTTTGTTTTACATGATAGATCA TAATTTATTGACTCGGAGACAAAAAGCATGTGGAGTTTTTCATAAAAAAAATTGTAACTTTTGAAAATGTAGATTGTAGCCTTTGAAAGCTAGCTTATTT CAGAAGCTATAAGCTGTTTCAATAGTGAATGTCTCATTTTGTCCTTCAATTTTAAGTCAATGTAATATTACATGCCCTTTTAACTTTTAAGTCATCAGCT AGTTGCAAAATTGATTTTACTCATTTTACCAAACAATTCTAATTCAATACGCTCGCTACACAAGTGAAACCCTTCACCTAGCTTCATCTCTATAAGGCTA TAAGCTACAATTCTAATTCAATAAGTTACTTTTGCCAAAGAAAACCTTAGTAGGTGTAAACTTCAGTGTTTATTCTTCTTCCCAAACAAGGTTTTAGATT CATGTTAGGTAGAAGCATCAAATGGTTGCTCATTTTCAAATTCCCATGTAAGCAAACGGTTCTTGTATGGTTCCGAAATAATCAAAGAGAATTGCGAATC CCAGTTCTCTTTGATTTGTTCATTACAAGAGGTGTGTTTGCTGGTATACATGGTTGAAACACACACCATATCTCGTCGTTGAGGTGGACATTGTTCTCGC AGTGCACCGACTTCTTTTCGCGAGCACTTGACATCTGTTACCTTGGCAAATTATCTCCAGATCTGCTTGATACACCTTTACAATACCTACTTCAAACTGT GTGTTGCACGATTTCTAAATTCAATTTCAAAACTTGATGACATTTAAGTACTGTTTGTTGTGATTATTAGGAAGTTGGGTAGTTGCTATTTCTATAATCT TCCCCGCCACTTGCTTTCTAAGTTAGTACAATAAAGAATGTCGAGGAGTGCTAGCTTAATTTATCATAATTCATATATTGTACTTTCCCATCTCAGAATT CTCTGAAGTTTAATTCTGTGGGGGGAGCATGTAGCAGAAGTAACTGCTGGCTGATCATAAATGGCACCCAATCCAAGAGTAGTAGCGGCCTGTGATGCAA TGGCAAATCTTGGGATTCATATATCAAAAGTGAAGCCAGTACTAAAGAAACTCCTGAAATTGTATGATAAGAACTGGGAACTTATTGAAGAAGAGAACTA TAGAGCTCTAGCAGATGCAATATTTGATGTGGATGAAGATAAGGTGTATTTTCCACTTTGTCATCTATTTTTTTTAATCTAAACCTGGTCTAATCTACAA ACTCTCATCTACTGCCTGATTTCATTTAACAGGTACCAGAGGTTCATATAAAGAAAAACAAGAGAGTTGATGAAGGAGGGGCAGATGATGAAGAAGCTCA TCTGCATGATGAGCCATTGCAACCTTTGAAGAGATCACGTTTAAGAAGACAAGAGGCTCAATCTTCACATCCGCTGAGTAGCTCTGGCCCCAGCTCAGCT GCCTGTTCATTGAAAATACCTAAACTAGAAGATGGGATAGTACCTGAGAGTAGTTCTGAACCGCAGCATCGAAGCACGACAGTGTTATCAGATGGAAATG CACGAAATGAAACACATCAACTTCCACCACGAGATGGCATTGTTGACAAGGGAGAGCAACCTGTATCACCTCATGTTACTTATAGAAGGAGAAGGTTTAC ATCTGAAAGAGCAACCCCAGCAGTGCCCTTGATCATACCCAAGGATGAGCCTATCAATGACTTGCCAGATTTTGTATTTCCCCTTACAATGATTCTTCCT GAACAATCAAGAAGAAGGGACTCTTCAATTAATAATGGTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGGGTTGCCATGCAGAGATAGAGAAGTTG GAGCTCAAGATATTCTTCCTTCCTCACATAACGAAGTGGCTTCTAATGTTGAGATAGCCTCTCCGGCTGTGGGAGAGGTAACTGCAGCTGAAAAGCAAGA TGGCCATGACACAGTGGCATTGCAATGCAGGGATGGAGAAGTTGGAGGTGAAGATATTCTTCCTTCCTCACATGAAGAAGCAGATCCTAATGTTGAGATA AACTCGCCTGCTATGGGGGAGGAAGGACCTGCAATGATAACACCAACTGTTAACATGTCAATGGAGCCTGGGGAATTTGAGCCCCTGCTTGTCGAAGGAA ATGAAGATTCTGTTATGCCTTGCATTTCAAATGGATCAATCGATGATATGTCTTCTGCTGACTTGGTGGCACCTCAAATTTGTAGTTCCAAACCCTGCCC AAGTGGTCTGGGTGATGCTGTATTGCTTTCCAAGAAGTTTGGAACTAATGATTTCATAGAAAGTGATGATGGAGCAAAGTTGGTGTGTGTTGTGAGTCCT AATTCACCCAGTTTAACACTTGTTCCAGAGCATCATCCTTCAAGTGAAATGAAGACTTCTCAAGATGTTAATGACCTAATGAAGGGAGAAGAAAATGTGA AAATTTCATGGGTGAATAATACTAGTACCGATTGCCCACCACCCTTCCACTACATACACCGAAGTGTTGTGTTCCGAGATGCTCATGTCAAGATTTCTCT ATCACGTATTGGAAATGAGGATTGTTGTTCCACTTGTATGGGAAATTGTGTGTTGTCATCAAAACCATGTTTTTGTGCAAATAACACTGGAGGTGAATTT GCATACAATGCAGAAGGCCTACTGAAGGAAGAGTTCTTGAAAGAGTGTATTTCCATCAGCCACCACCCTCAACATTATTTTTATTGCAAAGACTGCCCAC TTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGCTGTAGGAAACA GTGTGGCAATCGTGTTGTCCAGAGAGGAATAACTTGCAAATTGGAGGTGTTTTTAACTGCAGAAGGAAAAGGGTGGGGTCTTCGCACCTTGGAGGACCTT CCACAAGGGGCATTTGTATGTGAATTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGGAGGACCTTGAAATATCCCAAAACTGGGAAATGTCCCT ACCCAATTCTGTTGGATGCAAATTGGGATTCAGGAGTTGTGAAGGATAAAGAAGCTCTTTGCTTGGATGCAGGATCATATGGAAATGCTGCAAGGTTCAT TAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCTGATCATCAGTACTATCATCTTGCCTTCTTCACATCCAGAGAA GTAGTTGCGCAGGAAGAGCTTACATGGGATTATGGCATAAACTTTGATGACCAAGATCAGCCTGTTGAGCTGTTCCAGTGCAGATGTGGCAGTAAATTCT GCAGGAATATGAAACGGTCAAATAGGTCCACTAGATCATCAATTGAAAGATGATAGCCATTATCTGTTGAAATTTGTTTCATGCCAGACAATGCCATGGA GGAGTTGTGACAAGACCAAACTCAATGAATTAGTCTCTTTTTCTTATTGTTTTGCTAACTTTGTTCAGCCATCTGAGAATTTTTATGCAGACATAGCCAA AAAAACAAGATAACCTTTAGTGGGTAGCAAATCTGAACCTTTGGTGGAGGGGTTTATTGAAACGCCCAAGGATATTTGTGTTTGGACTTTGGAATTCCAT GTTGTCCTCAATGCATGACACACTAATTGTTAACAACACTTTTTTTGGTTTTGTTGTATATGTTATTATTGAAAGGTAGAAAAGGTAATAGCCCATTTTG GTATTTGCTAGGATGAGAAATGAGAGCAACTAAATAAAGTGGTGTCCCTTCCCAAAATAAAAGCTTCAAGTTAACAACAAAAAGGGAGAATGGAAAAAGA TGCCAATAGAGTATAAATCATTTCAACTCAACTCATTAGTAACTGCTTATTAGCACCAATTTTTCCATTATGGGATTGCAATTGATGCTGATCTAGTTGA TCTTGCATCATGATTCATGCATGATTGGGTAAAAGGAAGTTAATAAATAACTAAGTTGACAGAAACTCATAACGGGCCTTGTGTTAGAGAGTTATAAAGT GGTCTGATGGTGGTCGTAAAGACCAGAGTGCAGGAGGTTGTGGGTTTGAGGAGGTTGAGGTGATATATCACCACAACAAATTATTAACGTACTAACATTT ACATTCTAAAAAATTGTCGATAAAAAAAAAAAGACGGGCCTTGTGTTATTGAAGCGAAACCAACTAAAAAACAAAAAGCCCATAAAGGCCTGAATTGTTG AACCCTAGTCTCAGTTTCTGAATAGTTTCATTAACCTAATAAAAAAGTCTCACTGTTTTCGTTTCCTGCTATTGAATTCTTCAATTTCTCATTTTTCTTT CAATCTGCTTTCAAGTGATTCAAATAACCTTATCACTTATCTGCCTCATCAATACCTTTTCATCTTCTTCACTTTATTGTTACCTCTCAAAAACCTCGCT GCATTCACATCATTTCTCACTTTTTTGCTTAAAAATTGTTACTTTTACCATTTTTTGGTTCTGTTGCATCGATGTTTTCAATGTCTGGATAACCCTTTTG ATTCTTCTGTAAGAGGGTATACTTTGTTATCCACTTAATGAAGTGATTAAACTTGTGAATTTCTTGCAGGCACTGACCTATTTTGATATGAATCAATGAC ATGAAGCTATTATCAAACTTCAGATACAACATCTTCAATTATGACTCTTTAACAATATCATCCAACAATTCCTTTGGATTATTCAACCGTTTCATTCAAA GGAGATGGAAAAAACCAACTGTTTCTGCTCAAACCCGTTTGGAGGACAGAGTGAGGGACCCACACCTAGACAACTTCATGGTCCACCTTAACAAACTCAA ATGTATCCTCAAAATGCACCACCTTATGTCAAGCCGAAAGCGCGGTTCGTTTGTGTCCTTACAGCTCATGTCTCGATGGAGGAACATTGTTGGACTAAAT GTCACCATGGGGTCCTTTATTTATAGATACCCTCATGTTTTCGATGAATTTGTGCACCCATTTCGGAGGAATTTGTGTTGTAGAGTTACTCGAAAAATGA AGGAATTGGTCATGTTGGAAAAGGTTGCTGTGAAACAGCAGGAGATGGAGGCTGTGAAGAGGTTGAAAAGGTTGTTAATGATGTCTGTGAATGGTACCCT TCATATTCACGCGTTGAGGTTAATCAGAAGAGAACTCGGCCTTCCCGAGGATTTCAGAGACTCAATTCTTGGCAAGTATAGTGGCGACTTCAAATTGGTT GATTTAGAGATTGTGGCATTAGTTGATAGAGATGATGAATTGGGAAAGGCAGAAGTTGAGAAATGGAGGGAGAAAGAGTATACAGAGAAGTGGCTTAGTG AATTTGAGACCAAGTTTGCTTTTCCTATCAATTTCCCAACAGGGTTTAAGATTGTGGGAGGCTTTAGGGAGAAGTTGAAGAATTGGCAAAGGCTTCCATA TGCAAAACCGTATGAGAGGAAAGAGGTCATTCGGGTTCGATCGTGTGGTGGGGTTGAGCGCTACGAGAAGAGGGCTGTCGCTGTTCTTCACGAGCTCTTG AGCTTGACCATAGATAAGATGGTTGAGGTGGATCAACTGGTTCATTTTAGAAAAGACTTGGCTATTGAAGTTAATATGCGCGAATTGCTGCTTCGGCACC CTGGAATATTTTACATATCTACAAAAGGAAAAACACAGACAGTTTTTCTTAGAGAGGCATATAGCAAAGGGAGATTGATTGATCCTAATCCCATATATAT TGCACGTAGGAATATGTTGGAGCTTGTATTATTAGGAAGGAGAAAAACTAAACAATTGTTAGGTTGTGATAATGTTAAGGAAGAGAACAATAGTGTAGTG AATGAAGTAGATGTTGAAGGTAAAAGACAAGGAGATTGGGTGATTCCATTTTTGGAGAGTTCTTAAGAGAATAGATCAACATATTTGAAGAGCTTATATA TTCATTTGATTATTAGCATATCTTTTTCTTTTGCACCTTGTCCTTATATTTTTGAACTTGTCATATTCATATATAATATATTGCTAGACAAGACATAATT AAAAAAAAAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_45430; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_157971
Blastp | Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 53.87% of identity |
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Blastx | Histone-lysine N-methyltransferase SUVR4 from Arabidopsis with 51.67% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT3G04380) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429978.1) |
Pfam | Pre-SET motif (PF05033.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |