| Id Trinity | FTRINITY_DN54824_c1_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_93240 |
| Sequence | TAAACGTGACGAGGCTGAAGTTAACCCACATAGCGCACAGTTTATCCTTCGCACCCAAAAAACACGTATTTTAGCGTAAAACTTTTTTCAAATTGTTTTC TCCATTGTTACTGAATCTTCTTTGACTCTGAGGTTTCTCTCTCTCTCTCTCCTCAACTGCAAGGAATAAATTTCACCAACGCTTCTTTTTTTCTGTCGGG TTATGAGCTTATAACCGTTTCAAGATGCACATTAAGCAGATTGTGATTGAAGGCTTTAAGAGTTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTA AAGTTAACTGTGTCGTTGGTGCTAATGGATCTGGGAAAACAAACTTCTTCCATGCCATTCGTTTTGTTTTAAGTGATCTATTTCAGAACCTACGCAGTGA GGATAGACATGCACTACTCCATGAAGGAGCTGGACACCAGGTTGTATCTGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTTGAC AAGGAGGAAGTGCGCTTGCGAAGGACTATTGGTGCGAAAAAGGATGAGTATTTTCTAGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTATTGG AGAGTGCTGGGTTCTCTCGCTCAAATCCTTACTATGTTGTACAACAAGGAAAGATTGCTTCACTTACCTTAATGAAAGACTCTGAGCGATTGGATTTGCT GAAAGAAATTGGTGGTACCAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGCAGGAAACAGGTAACAAAAGAAAGCAAATAATTCAAGTT GTACAGTATTTGGATGAGAGGTTGAAGGAGCTAGATGAGGAAAAAGAGGAACTAAGAAAATATCAACAGCTTGACAAACAAAGAAAATCCTTGGAATATG CTATTTATAACAAGGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGCTCGAGCCAAGATTTCTGAAACGTCGGCAAAGATGTATAATGA CGTGCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACAAAAGAACTTAATAACTTTAACAAAGAGAAAGAAGTTATAGAA AAACGACGAACGGAGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGATCTAAAGGACAAGATCTCTGGAAATAAAAAAGCCAAAGAAGATG CTGTAAAACAACTTGGGACACTTGAGAAAGAAATTCAAGACTCGATGAATGAACTGGACAAGATCAGTCCTTCATATGAGGATCAAATTAGAAAAGAAAA TGCAATTGCCAAGCGAATAATGGAGCGTGAGAAGCAACTTAGTATACTTTACCAAAAGCAGGGGCGAGCAACCCAGTTTCCAAGCAAAGCTGCTCGTGAT AAGTGGCTTCAAAAGGAGATTGACGATCTTAAAGGAGTGCTTTCTTCTAACACAGGGCAGGAGCAAAAGCTTATGGAAGAAATTGACCGGCTTAATGGTC AGCTTCATGAGTGTGATGAGTGCATTAAGAGTCGTAGGTCAGAGATTACTACATTGGAATCTCTCATTACAAAATCACGTGAAGGGTTTAATCATCATAA AGAACAAAGAGACATTTTGCATGACGAGAGGAAATCCCTATGGGCCAAAGAGAATCAACTTACTGCTGAAATTGATAAGCTGAGAGCAGAAAAGGAGAAG GCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTCAGAAGAGGGTTGAATTCAGTTCGGAAGATATGCAGGGAGTATAAGATTTCTGGAGTTCATG GTCCTATTATGGAGTTGCTGAACTGCGATGAGAAGTTTTTCACCGCAGTTGAAGTTACTGCTGGAAACAGCTTATTTCACGTGGTTGTTGATAATGATGA GACATCTACCCAGATAATTAGACATCTTAATTCACAGAAAGGCGGACGAGTTACATTTATTCCCCTTAACAGAGTGAAGGCTCCACGCATTACTTATCCA CAGAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAACTTTAAACATGAATATACACCCGCATTTAGCCAGGTATTTGCTAGAACAGTGATCTGCAAGA ATCTGGATGTGGCTTCAAGGGTTGCTCGTAATGATGGTCTGGACTGCATAACATTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATT TTACGATCACAGACGATCAAAGTTGAAGTTTATGAATATCATCAAGCAGAATGAAGACAATATTTACGAGAGAGAGGTCCAGTTGAATGAAGTTAGATCC AATCTAAAAGAGATAGATGATAAAATCACAAAAATTGTTACCGAGCAGCAGAAGATTGATGCCAAACGTGCTCATGACAAATCAGAAGTGGAACAGCTTA AGCAGGACATTGCTAATGCTAACAAGCAGAAGCAATTGGTTTCTAAAGCAATTGCAAATAAGGAGAAGTCACTTGTAGATGTCCAGAATCAGATTGACCA GCTCAAGGCTAGTATGGCAGTGAAACAAGCTGAGATGGGCACAGAGCTCATTGACCATTTAACACTAGAGGAAAAAAAGCTTTTGTCAGATTTGAATCCT GAAATCAAAGATCTTAAAGAGAAACTTGTTGCTTCAAAGGCCGAGCGTGTTGAGGTTATTGATTGAATTGTATTGTATTGCTGTTCATAATCTTCACAGG GCTAATTTCCTTACTTCAACTTAAATTTGACAGACTGAAACTCGGAAATCAGAGCTGGAAACTAATCTAACGACTAACCTTAGGAGAAGAAAGCAAGAGT TGGAGGTTGTAATATCATCTGTGGATGCTGATTTTTTGGATGATGATGCTGAATTGAAGGGTAAAGAAGAACTTAGTTCTGCTAAAAAATCGGTTGATGA TGCAACAACGCAGCTTCGAGGAGTTTCTGAAAGTATAAAGGATAGGACAAGCCAAATTAAAAAGATCAAAGATGAAATGAATAAATTGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46022; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93240
| Blastp | Structural maintenance of chromosomes protein 3 from Arabidopsis with 70.49% of identity |
|---|---|
| Blastx | Structural maintenance of chromosomes protein 3 from Arabidopsis with 70.49% of identity |
| Eggnog | Required for chromosome condensation and partitioning (By similarity)(COG1196) |
| Kegg | Link to kegg annotations (AT2G27170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434196.1) |
| Pfam | AAA ATPase domain (PF13175.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |