Ll_transcript_93233

Id TrinityFTRINITY_DN54824_c1_g2_i6
Name TranscriptLl_transcript_93233
SequenceTAAACGTGACGAGGCTGAAGTTAACCCACATAGCGCACAGTTTATCCTTCGCACCCAAAAAACACGTATTTTAGCGTAAAACTTTTTTCAAATTGTTTTC TCCATTGTTACTGAATCTTCTTTGACTCTGAGGTTTCTCTCTCTCTCTCTCCTCAACTGCAAGGAATAAATTTCACCAACGCTTCTTTTTTTCTGTCGGG TTATGAGCTTATAACCGTTTCAAGATGCACATTAAGCAGATTGTGATTGAAGGCTTTAAGAGTTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTA AAGTTAACTGTGTCGTTGGTGCTAATGGATCTGGGAAAACAAACTTCTTCCATGCCATTCGTTTTGTTTTAAGTGATCTATTTCAGAACCTACGCAGTGA GGATAGACATGCACTACTCCATGAAGGAGCTGGACACCAGGTTGTATCTGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTAATG ATTTGATAATTTCTTTTTCCAGTAAGTTGCAGAAGGAGGATAATTTTCAATTTTTTAATTGTTTCTTAAACTTTGTTTAAACATCACTTAATGCATATTT TCTTTTAGGTCTAGATAAAATAATGATGCTATTTTTTTTGTAGTAAACAGTTTATAGCAAAATCATGATTGCTATGGTGAGGAAAGTATAGCCTTATTTG ACAGTTATTCTATTTCAATCACAGGATAAATTGTCTAGTGGCTGTTATGGAGCATATTCTCATGGGTTTTGCTAATTAGTCACCTTTCTTTTTGCTATTT TTAATCTCTATCTTTCATGTTGTGATGATTGGTCGTATATTTATTTTCTTGTGTTGCGCTAATGAGTGCATATTAGTGGCTATACTGCTCAACGTATATG GAGAAATGCTGTAGGCATAAGGGAAAGATTTTTAGTTTTGGGTTAATGAAGATTTTTGTGATGACTGGATGAGTATTATGTTTTTTGCCCTTTAATTTTT TTGCCATATTTATCTAATTTTCTATATTGATTAATGTTCTTCTCAATTCCATTTTTGAAAGTCCTGGCGCCGATCTTATGGGTTTTGATGTTAAATACTT TCTGCTAGCCTTGACGTAATTTTATCAGTGATGAGATGTTCTTGTTTGGTCAGATATTTGAATATTTTTATTTTGATGACAGATTCTTTTAGTACAGTCA CATTTTCATATACTTGTTTTAGGTCAACTATCCTTTTTTAAGGTTGCAAGTGAAAACTCAGTGTCAGTCCTTGCTGATGTGATGTATACATTGCTTCAAT TTCCCTTTCTCTGTTCAGATGAGTGGTTTATGTTCCATAACCACTTATTTGCAACATTTTGTTTCTTTGCATTATCTTAGTATCTGTCTGTGCCCCTGAT TAGGTTGACAAGGAGGAAGTGCGCTTGCGAAGGACTATTGGTGCGAAAAAGGATGAGTATTTTCTAGATGGAAAACACATAACAAAAACTGAAGTGATGA ATTTATTGGAGAGTGCTGGGTTCTCTCGCTCAAATCCTTACTATGTTGTACAACAAGGAAAGATTGCTTCACTTACCTTAATGAAAGACTCTGAGCGATT GGATTTGCTGAAAGAAATTGGTGGTACCAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGCAGGAAACAGGTAACAAAAGAAAGCAAATA ATTCAAGTTGTACAGTATTTGGATGAGAGGTTGAAGGAGCTAGATGAGGAAAAAGAGGAACTAAGAAAATATCAACAGCTTGACAAACAAAGAAAATCCT TGGAATATGCTATTTATAACAAGGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGCTCGAGCCAAGATTTCTGAAACGTCGGCAAAGAT GTATAATGACGTGCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACAAAAGAACTTAATAACTTTAACAAAGAGAAAGAA GTTATAGAAAAACGACGAACGGAGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGATCTAAAGGACAAGATCTCTGGAAATAAAAAAGCCA AAGAAGATGCTGTAAAACAACTTGGGACACTTGAGAAAGAAATTCAAGACTCGATGAATGAACTGGACAAGATCAGTCCTTCATATGAGGATCAAATTAG AAAAGAAAATGCAATTGCCAAGCGAATAATGGAGCGTGAGAAGCAACTTAGTATACTTTACCAAAAGCAGGGGCGAGCAACCCAGTTTCCAAGCAAAGCT GCTCGTGATAAGTGGCTTCAAAAGGAGATTGACGATCTTAAAGGAGTGCTTTCTTCTAACACAGGGCAGGAGCAAAAGCTTATGGAAGAAATTGACCGGC TTAATGGTCAGCTTCATGAGTGTGATGAGTGCATTAAGAGTCGTAGGTCAGAGATTACTACATTGGAATCTCTCATTACAAAATCACGTGAAGGGTTTAA TCATCATAAAGAACAAAGAGACATTTTGCATGACGAGAGGAAATCCCTATGGGCCAAAGAGAATCAACTTACTGCTGAAATTGATAAGCTGAGAGCAGAA AAGGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTCAGAAGAGGGTTGAATTCAGTTCGGAAGATATGCAGGGAGTATAAGATTTCTG GAGTTCATGGTCCTATTATGGAGTTGCTGAACTGCGATGAGAAGTTTTTCACCGCAGTTGAAGTTACTGCTGGAAACAGCTTATTTCACGTGGTTGTTGA TAATGATGAGACATCTACCCAGATAATTAGACATCTTAATTCACAGAAAGGCGGACGAGTTACATTTATTCCCCTTAACAGAGTGAAGGCTCCACGCATT ACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAACTTTAAACATGAATATACACCCGCATTTAGCCAGGTATTTGCTAGAACAGTGA TCTGCAAGAATCTGGATGTGGCTTCAAGGGTTGCTCGTAATGATGGTCTGGACTGCATAACATTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGAC TGGAGGATTTTACGATCACAGACGATCAAAGTTGAAGTTTATGAATATCATCAAGCAGAATGAAGACAATATTTACGAGAGAGAGGTCCAGTTGAATGAA GTTAGATCCAATCTAAAAGATATCCTTTTACACTTGTTTTTATTAACATTCTTGTATTGTTTTTCCTTCTTTTAAATTATAATTTATTGAAGGCATAGAA AAAACAGAGGAACTAAAAGAAAATAAATCCAGAGTATGACCTGAATCAGCTGATCAAATATTTGAAAAAAAACTGACTGTGGAGAGAGGAAACAGTTTGG TAATGTGTCCCCAATCGCAATATCTCTTGTTTTGTTTTTTATTTACTCACATTATGTTAAATGCATATTTTTGCCCAAGGAGGTCATATATAGGAAGGAG ATAGTTCATAGCGTCAGACATGTGGAGGAAGGCTTATTCGGTGAATGACTGAGCAAGCGAGCTTTTGTGTACAACAGTGGTGCCATGGACAATAGTGGCT TGGCACTATAAATTTGGTTGGCGGTGTCGGGCTTAGTGAACACTTGGGTGGAAGTAGAGAATAATGGCTATGACTTACTAAGCATCGGGATTTGAATTGA ATAGATATGATTGTGAGAAGCAGAGATGGCCATGGCTAGTTGGGTATAGTTGCCCACACGATAGATGAAGAGTTCAGAGTTTGATTTTTAATTACTTTAA AATTATTTCTTGGATAAATTATATCATGGAAACTGCCTCTTACCTTGCAATGGTAAGGCTGCATATATATATACCTTCTATAGACTCCATTAGGTGAGAG CCTCATGCACTGAGCTGCCTTTTTTTAGAGAGTTTTAATTTTAAAATTGTTTTTAAAACAACATTATCAAACAATTTTTTATCCTTTGTTCTGGAAATAC TTGTTCCTACTACAATGTGGCCTGTGGGAACCATTCTAGAATTACATTCACAAATATGGCAAATGTCGCCGCTCGGATAATAATTTTTTTTCACCTAGTG GGATAAAGGCTTGGATGTTGTTTTTGTTCTGAAAATACTTGTGAACGGCTTCTCCACTTGCCCAATGTGTATATCTACCCTTCCCATACCCCACAAGGTG AGAGCCTCGTGCATTGAGCCCTCCCTAGACCCCATTAGGTGGGAGTATCGTGCATTGGGCCACCCCATTTTATTTTGAAAATGGTTTTCAATTTTCTTTA CAAAATTGTTTTGAAAACAAAAACACAAATCAATCAGAAACACAAAACAGTCAGGGCCTTAGAGAGGCTCTACCTGGGTTTTAATGTTTTATGCTGAGGG CAGTTGGATATAACTTGTATGTTACTGTAATTTGTTGGTTCCATAAGCCTTCATCGAAGTTCAGTGACTCTTTTGACTCTGTCGTCCGGGATACCTTTTG TTTATTTATCACATTCTTCATTTTGTTCATTTGTTGATGGTTTGGTTTTGCTTTAGGTGATTTATTCATCTTAACCTAAAAATGTTATAGTACATATATA GCATGTAGTGCCATAGGATTCATTAGTTTTGTGAATGACTTATCTAAAGCCTGTTTTATTCCTTGGCCTGAAACCATTTCCTCCAATAGTTTTGTTTTCA CTGAACTAGTCTCACAGATAGATGATAAAATCACAAAAATTGTTACCGAGCAGCAGAAGATTGATGCCAAACGTGCTCATGACAAATCAGAAGTGGAACA GCTTAAGCAGGACATTGCTAATGCTAACAAGCAGAAGCAATTGGTTTCTAAAGCAATTGCAAATAAGGAGAAGTCACTTGTAGATGTCCAGAATCAGATT GACCAGCTCAAGGCTAGTATGGCAGTGAAACAAGCTGAGATGGGCACAGAGCTCATTGACCATTTAACACTAGAGGAAAAAAAGCTTTTGTCAGATTTGA ATCCTGAAATCAAAGATCTTAAAGAGAAACTTGTTGCTTCAAAGGCCGAGCGTGTTGAGACTGAAACTCGGAAATCAGAGCTGGAAACTAATCTAACGAC TAACCTTAGGAGAAGAAAGCAAGAGTTGGAGGTTGTAATATCATCTGTGGATGCTGATTTTTTGGATGATGATGCTGAATTGAAGGGTAAAGAAGAACTT AGTTCTGCTAAAAAATCGGTTGATGATGCAACAACGCAGCTTCGAGGAGTTTCTGAAAGTATAAAGGATAGGACAAGCCAAATTAAAAAGATCAAAGATG AAATGAATAAATTGAAGTCTTTGGAGGATGATTATGAAAGAAGACTTCAGGAAGAAGCAAAAGAATTAGAGCAATTGCTGAGTAAAAAAAATATCTATTC TTCTAAAGAAGACGAGTATACCAAGAAAATAAGGGAATTGGGTCCATTGACATCAGATGCTTTTGAGGCGTACAAGCGGAGGAACATCAAAGATTTGCAT AAAATGCTGCACAGGTGCAATGAGCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCACTTGACCAATACATAAATTTTACAGAACAACGAGAAGAAC TTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCAGTACTAGATCAACGGAAGGATGAATCAATTGAACGGACTTT CAAAGGTGTTGCTAGGCATTTTCGAGAAGTATTTTCGGAACTTGTCCAGGGGGGCCATGGCCATCTGGTTATGATGAAGAAGAAGGATAATGATAATGAT GATGATCAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAGAAGTACATTGGAGTGAAAGTAAAGGTCTCTTTCACTGGACAAGGAG AGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTCGTTGCCCTTACACTTATCTTTGCCATACAGCGATGTGATCCAGCTCCCTTTTATCT ATTTGATGAGATTGATGCAGCACTGGATCCACAGTACCGAACTGCTGTTGGAAATATGATCCGACGCCTGGCAGACATAGCAAACACACAATTTATCACA ACAACGTTCCGCCCAGAGCTTGTCAAAGTTGCTGATAAGATATATGGAGTGACTCATAAAAACAGGGTCAGCCGTGTTAATGTCGTG BLAST
Tissueflowers
Gene nameLI_gene_46022; 
Additional informationdetails; 

Expression of Ll_transcript_93233

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_93233

BlastpStructural maintenance of chromosomes protein 3 from Arabidopsis with 68.75% of identity
BlastxStructural maintenance of chromosomes protein 3 from Arabidopsis with 69.88% of identity
EggnogRequired for chromosome condensation and partitioning (By similarity)(COG1196)
KeggLink to kegg annotations (AT2G27170)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434196.1)
PfamSMC proteins Flexible Hinge Domain (PF06470.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;