| Id Trinity | FTRINITY_DN54824_c1_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_93236 |
| Sequence | TAAACGTGACGAGGCTGAAGTTAACCCACATAGCGCACAGTTTATCCTTCGCACCCAAAAAACACGTATTTTAGCGTAAAACTTTTTTCAAATTGTTTTC TCCATTGTTACTGAATCTTCTTTGACTCTGAGGTCGGGTTATGAGCTTATAACCGTTTCAAGATGCACATTAAGCAGATTGTGATTGAAGGCTTTAAGAG TTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTAAAGTTAACTGTGTCGTTGGTGCTAATGGATCTGGGAAAACAAACTTCTTCCATGCCATTCGT TTTGTTTTAAGTGATCTATTTCAGAACCTACGCAGTGAGGATAGACATGCACTACTCCATGAAGGAGCTGGACACCAGGTTGTATCTGCATTTGTGGAGA TTGTGTTTGATAATTCAGACAACCGTATCCCGGTTGACAAGGAGGAAGTGCGCTTGCGAAGGACTATTGGTGCGAAAAAGGATGAGTATTTTCTAGATGG AAAACACATAACAAAAACTGAAGTGATGAATTTATTGGAGAGTGCTGGGTTCTCTCGCTCAAATCCTTACTATGTTGTACAACAAGGAAAGATTGCTTCA CTTACCTTAATGAAAGACTCTGAGCGATTGGATTTGCTGAAAGAAATTGGTGGTACCAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGC AGGAAACAGGTAACAAAAGAAAGCAAATAATTCAAGTTGTACAGTATTTGGATGAGAGGTTGAAGGAGCTAGATGAGGAAAAAGAGGAACTAAGAAAATA TCAACAGCTTGACAAACAAAGAAAATCCTTGGAATATGCTATTTATAACAAGGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGCTCGA GCCAAGATTTCTGAAACGTCGGCAAAGATGTATAATGACGTGCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACAAAAG AACTTAATAACTTTAACAAAGAGAAAGAAGTTATAGAAAAACGACGAACGGAGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGATCTAAA GGACAAGATCTCTGGAAATAAAAAAGCCAAAGAAGATGCTGTAAAACAACTTGGGACACTTGAGAAAGAAATTCAAGACTCGATGAATGAACTGGACAAG ATCAGTCCTTCATATGAGGATCAAATTAGAAAAGAAAATGCAATTGCCAAGCGAATAATGGAGCGTGAGAAGCAACTTAGTATACTTTACCAAAAGCAGG GGCGAGCAACCCAGTTTCCAAGCAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGACGATCTTAAAGGAGTGCTTTCTTCTAACACAGGGCAGGA GCAAAAGCTTATGGAAGAAATTGACCGGCTTAATGGTCAGCTTCATGAGTGTGATGAGTGCATTAAGAGTCGTAGGTCAGAGATTACTACATTGGAATCT CTCATTACAAAATCACGTGAAGGGTTTAATCATCATAAAGAACAAAGAGACATTTTGCATGACGAGAGGAAATCCCTATGGGCCAAAGAGAATCAACTTA CTGCTGAAATTGATAAGCTGAGAGCAGAAAAGGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTCAGAAGAGGGTTGAATTCAGTTCG GAAGATATGCAGGGAGTATAAGATTTCTGGAGTTCATGGTCCTATTATGGAGTTGCTGAACTGCGATGAGAAGTTTTTCACCGCAGTTGAAGTTACTGCT GGAAACAGCTTATTTCACGTGGTTGTTGATAATGATGAGACATCTACCCAGATAATTAGACATCTTAATTCACAGAAAGGCGGACGAGTTACATTTATTC CCCTTAACAGAGTGAAGGCTCCACGCATTACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAACTTTAAACATGAATATACACCCGC ATTTAGCCAGGTATTTGCTAGAACAGTGATCTGCAAGAATCTGGATGTGGCTTCAAGGGTTGCTCGTAATGATGGTCTGGACTGCATAACATTGGAAGGT GATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTACGATCACAGACGATCAAAGTTGAAGTTTATGAATATCATCAAGCAGAATGAAGACAATA TTTACGAGAGAGAGGTCCAGTTGAATGAAGTTAGATCCAATCTAAAAGATATCCTTTTACACTTGTTTTTATTAACATTCTTGTATTGTTTTTCCTTCTT TTAAATTATAATTTATTGAAGGCATAGAAAAAACAGAGGAACTAAAAGAAAATAAATCCAGAGTATGACCTGAATCAGCTGATCAAATATTTGAAAAAAA ACTGACTGTGGAGAGAGGAAACAGTTTGGTAATGTGTCCCCAATCGCAATATCTCTTGTTTTGTTTTTTATTTACTCACATTATGTTAAATGCATATTTT TGCCCAAGGAGGTCATATATAGGAAGGAGATAGTTCATAGCGTCAGACATGTGGAGGAAGGCTTATTCGGTGAATGACTGAGCAAGCGAGCTTTTGTGTA CAACAGTGGTGCCATGGACAATAGTGGCTTGGCACTATAAATTTGGTTGGCGGTGTCGGGCTTAGTGAACACTTGGGTGGAAGTAGAGAATAATGGCTAT GACTTACTAAGCATCGGGATTTGAATTGAATAGATATGATTGTGAGAAGCAGAGATGGCCATGGCTAGTTGGGTATAGTTGCCCACACGATAGATGAAGA GTTCAGAGTTTGATTTTTAATTACTTTAAAATTATTTCTTGGATAAATTATATCATGGAAACTGCCTCTTACCTTGCAATGGTAAGGCTGCATATATATA TACCTTCTATAGACTCCATTAGGTGAGAGCCTCATGCACTGAGCTGCCTTTTTTTAGAGAGTTTTAATTTTAAAATTGTTTTTAAAACAACATTATCAAA CAATTTTTTATCCTTTGTTCTGGAAATACTTGTTCCTACTACAATGTGGCCTGTGGGAACCATTCTAGAATTACATTCACAAATATGGCAAATGTCGCCG CTCGGATAATAATTTTTTTTCACCTAGTGGGATAAAGGCTTGGATGTTGTTTTTGTTCTGAAAATACTTGTGAACGGCTTCTCCACTTGCCCAATGTGTA TATCTACCCTTCCCATACCCCACAAGGTGAGAGCCTCGTGCATTGAGCCCTCCCTAGACCCCATTAGGTGGGAGTATCGTGCATTGGGCCACCCCATTTT ATTTTGAAAATGGTTTTCAATTTTCTTTACAAAATTGTTTTGAAAACAAAAACACAAATCAATCAGAAACACAAAACAGTCAGGGCCTTAGAGAGGCTCT ACCTGGGTTTTAATGTTTTATGCTGAGGGCAGTTGGATATAACTTGTATGTTACTGTAATTTGTTGGTTCCATAAGCCTTCATCGAAGTTCAGTGACTCT TTTGACTCTGTCGTCCGGGATACCTTTTGTTTATTTATCACATTCTTCATTTTGTTCATTTGTTGATGGTTTGGTTTTGCTTTAGGTGATTTATTCATCT TAACCTAAAAATGTTATAGTACATATATAGCATGTAGTGCCATAGGATTCATTAGTTTTGTGAATGACTTATCTAAAGCCTGTTTTATTCCTTGGCCTGA AACCATTTCCTCCAATAGTTTTGTTTTCACTGAACTAGTCTCACAGATAGATGATAAAATCACAAAAATTGTTACCGAGCAGCAGAAGATTGATGCCAAA CGTGCTCATGACAAATCAGAAGTGGAACAGCTTAAGCAGGACATTGCTAATGCTAACAAGCAGAAGCAATTGGTTTCTAAAGCAATTGCAAATAAGGAGA AGTCACTTGTAGATGTCCAGAATCAGATTGACCAGCTCAAGGCTAGTATGGCAGTGAAACAAGCTGAGATGGGCACAGAGCTCATTGACCATTTAACACT AGAGGAAAAAAAGCTTTTGTCAGATTTGAATCCTGAAATCAAAGATCTTAAAGAGAAACTTGTTGCTTCAAAGGCCGAGCGTGTTGAGACTGAAACTCGG AAATCAGAGCTGGAAACTAATCTAACGACTAACCTTAGGAGAAGAAAGCAAGAGTTGGAGGTTGTAATATCATCTGTGGATGCTGATTTTTTGGATGATG ATGCTGAATTGAAGGGTAAAGAAGAACTTAGTTCTGCTAAAAAATCGGTTGATGATGCAACAACGCAGCTTCGAGGAGTTTCTGAAAGTATAAAGGATAG GACAAGCCAAATTAAAAAGATCAAAGATGAAATGAATAAATTGAAGTCTTTGGAGGATGATTATGAAAGAAGACTTCAGGAAGAAGCAAAAGAATTAGAG CAATTGCTGAGTAAAAAAAATATCTATTCTTCTAAAGAAGACGAGTATACCAAGAAAATAAGGGAATTGGGTCCATTGACATCAGATGCTTTTGAGGCGT ACAAGCGGAGGAACATCAAAGATTTGCATAAAATGCTGCACAGGTGCAATGAGCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCACTTGACCAATA CATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCAGTACTAGATCAA CGGAAGGATGAATCAATTGAACGGACTTTCAAAGGTGTTGCTAGGCATTTTCGAGAAGTATTTTCGGAACTTGTCCAGGGGGGCCATGGCCATCTGGTTA TGATGAAGAAGAAGGATAATGATAATGATGATGATCAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAGAAGTACATTGGAGTGAA AGTAAAGGTCTCTTTCACTGGACAAGGAGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTCGTTGCCCTTACACTTATCTTTGCCATA CAGCGATGTGATCCAGCTCCCTTTTATCTATTTGATGAGATTGATGCAGCACTGGATCCACAGTACCGAACTGCTGTTGGAAGTATCCATTTTATTATGT TATCTTCTTGTCATGCCAATTAACTCTTTTGTAATTCTTTAATTGATGTTTACTGCATACTGCATCTTACGTTGCTTATTCCATAAAATTATACTAGTGC ATATTGAAGGTGGGGTTTTTTGATGCATGTGATGAGTCTTCAACCGTTGGAGATTTAAAAGTAGCTATCATACCAAGTGATCCAGACACCAAATCTCACT TTTCCCCCATTTATTTTTAAATCTTAGTTTTTAGTGCCTGTCATTTAATAACTTGAAGCTTTAAATTTTAGTGGTTATTTGTCATCCACAGTTTTGCAAG GATTATTTTTTTTTAATACCAACAGGCTTAAGCATAAGGGGATGAGCCTCGGCGCAATAGTAGTGTTGCTTACTTTGTGACCTGGATGCCATGGGTTCAA ATCCTATAAACAACATTGTCACTTACGAGGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_46022; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93236
| Blastp | Structural maintenance of chromosomes protein 3 from Arabidopsis with 72.17% of identity |
|---|---|
| Blastx | Structural maintenance of chromosomes protein 3 from Arabidopsis with 72.5% of identity |
| Eggnog | Required for chromosome condensation and partitioning (By similarity)(COG1196) |
| Kegg | Link to kegg annotations (AT2G27170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434196.1) |
| Pfam | AAA ATPase domain (PF13175.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |