| Id Trinity | FTRINITY_DN54828_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_92586 |
| Sequence | CTCATCCCCTGCAACAATAGAACTATCACACTCTTCTCTCTCCAAACTTTGCAATACTTTTTGAAACTTTCACAAACTCACTCTCTTTTTTCACGACCAA TCCTTCATATAAGTAAAAAGAATAATTTTGCTTTCTACTTCACTTAAAGCTACAATATCCTTCTCCATTTCCCTTCTAAGTTTGTGTTTCGGTGACCCTT TTGGCTATTTTCTATGTTTGTGTACCAAAGTTTCAATCTTGATCTTCTCCTTACAACTTCCCAAATTCATCTCCCATTTGGTTTTTAGGGTTTCAACTAT TACTGGGTAACATTCAAGTTCATTACTTTCATGGGTTTCCTCCATTTTTCAGTGCGGTGTTTTAAACTGGTTAAAGGGTAAGGGGTAATAGTGTTGGAAA TTTCAGTGGGGTTGTGAAAAAAAAGAGGAATATCAACATTGTCAAAAAGGTTGAAGTCATATGAGTGAAAGTTTCACCAAGTTTCACCAAGTTTCAAAGG AATCTTAAGAGGCGTTGGTGATGGAGGATATTGGGTTGTTTAAGCAAGGTTGGAACTGGCTTTGGTTGCAGAAGGACACCTGCTGCCATGCTCGAACCGC ACTGACTTGTTGCAGAGACAAAACTGCTATGTTCATTGAGCGGCATTGGCCTCTCGTCTGCATTGCTTGCTCCAGGTTGGGGAGCTTACTGAAGTTATCA TTGATTTTCTGGAAAGACTCTGCTCTGAGGGGGTTTCAGTCGTTCATTAGTTTCGGATCGGTGATGCTTCTGCTTATAATGTGGAGCTGCTTTCTTAGTT TAACGTCGATGTATTGCCTGGTTTACGTGCTTGTTAGTATGGGTGTTGCTGGAGTTGCTGTTCAATACTTGGGTTATACTCCTGGTATTTTTATTGTCGG GCTCTTTGCCATCCTTATTTTGTGGATGTATGCTAATTTCTGGATAGCAGGAACAATATTCTTAGTTGGAGGTTATTTATTCTCCCTAAACCGCGCTCGT TTGGTGGTGTTAATTGGTACTACATATGCTTTATATAGTGTTCAAGTTCAAGCGGGATGGCTGGGTGTTTTTCTTTCTACGAACCTTGCATTCATATCTA ACGACGTTTTGAATTTTCTGCTCCAATGGTTTGATAATGTGAGTGAAAGTTCACATTCTGAACAGCAGCAGCAGCAGTCAGAACCTATTGTAGAAGATGA CTTCTCCCAAGAGTGTGAATACTCTACCCCTTCCGATGAATCTGAGAATCTGCATTCATGTAAATCTTCTAGTAAACCTGCTGTTACTGCAACCACAACG GCACCAGTTGTTGATAAGCAGAAAGAGCTTTCTGCTAACAAAGTTGTTATAGAGGAGGCTAGTTCAATTGATGAAATGAGAAGAATATTGAAGAGTCTGG ATCATTATGAAGCCCTTGGATTTGCCCGCTACAAGAAGATTGATGCGGGAGTTTTGAAAAAGGAATACCGGAAAAAGGCTATGCTTGTGCACCCTGATAA AAATATGGGAAGTTCTTTGGCAAGTGAGTCATTTAAGAAGCTTCAATCTGCATATGAGGTTCTTTCTGACTCTGTGAAGAAGAGTGACTATGATGAGAAA TTAAGAAAAGAAGAATCCATGGCTAAAACTATGTGCCAAAAATCTCGTGGTAGTTCACATCAGGATAATCCTGATTATCGATCCGAAGATTCCAGACGTA TACAGTGCACAAAGTGTGGGAATTCACATATTTGGGTGTGCACTAACCGGAGTCAGGCCAAAGCAAGATGGTGTCAGGTTTGATTTCTTTTCATTTCATC CTGATTATTAAGCGCCTTCCTTTTTCTCTCTGTTCCATGCTCACTTTATCTTAGTTCCGAATTTTACTACTTATCCGAAAGCAGGACTGCTGTCAGTTTC ATCAAGCCAGGGATGGAGATGGATGGGTTGAATATAAAGGGTCTCTGGTTTTTGACAGGCCTCAGAAGGTGGAGATCCCACGCGCTTTCGTTTGTGCGGA GAGCAAAATTTTTGATGTGTCGGAATGGGCTATATGTCAGGGAATGGCTTGTAGGCCTAACACCCATCGGCCGAGCTTCCATGTAAACATGGTTGGTTTG GACAAAAGCCAGCATTGCAACTCAAGTAGATTCCCATGGGATTTGGATGCTGAAATGATGATGGATGAAGATGAAGAGGCATTTGACTTGTGGCTTCAGC AGGCTCTGGCATCCGGTCTATTTTGCGACACCTCCAAACGCCGGAAGAGCTGGAGTCCATTCAAACTGAGTCAAATGAAAGGGAAGAAGCAATGGCGAAG AACTTCATGCTAGTAGGACGAAAACACGCACGCCATTCATTGCCTTTCCGGAAGGGATTTTGATGGAGCAAACATTTTGTAGAAGAAAAGTGATGGATAC TGCTGATATCAAAACAAGCATAAAAAGCTTGCAACACTTACACTAAGGTGCCTTGTTTCATCAAAGATAGAGAAAAGTGCAAAAACCTCATTGCTCAAAT GGTCATTCATGTTTACAGAACATAGCTTGAGCTGGTTTACATTTTATGTGGCTTAGTGTTGCCTTGTTCTTATATCAGAAAGTGCTATTGTTTAGGATTA ACAGGAACTACTTTGGTACATTGTACATACTTCTTAATAAAAATTTCAGTATTCCTTTATGTTAACATGCATCTAAAATAAAGTGATGATGAGTTTGTTT CCCTTTCATTTAATTGTATATGATCATGGTTTCTTATGGATTCAAATTCATATAAAATGTAAGATGCTTTGGGTTGAATACAGAAGCTTGTAGCAGCAGC AGACGATATATTATTATGAGATTGTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46069; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_92586
| Blastp | Chaperone protein DnaJ from Nitrosomonas with 53.03% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily C member 14 from Homo with 31.78% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (Neut_0413) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425625.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |