Id Trinity | FTRINITY_DN54841_c2_g1_i2 |
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Name Transcript | Ll_transcript_94133 |
Sequence | ATAAATTATTAGACTAACTTTTGAAATCAAATCCCAACATAAATAAATATTCATAGAATTCAGTTGTTGAACTCATCCTATTTGACACTTGAAATAACAA TTCTATAAGTAGCTCAACATCTTCAAATCAAAACATTGTCTCCACTCAGCTTTTGTCATTGAGACTGATTATTCTCACCATGTTTTTCTTTTCACATTTA AGGCTCACTCACTCCCAAGTCTCCAACTTTTTTGTGCTTGGTTTTTTGGCCTTTACTGCCACTGTTACACTTGGCTATGAAGTTGCACAAGATCAAACAA GTTCTCTATTGGTGTGGAAAGCTAGCTTTGATAACCAAAGCCAAGCTTTTTTGTCTTCTTGGATCACTGATACAAACCCATGCATGTGGGTAGGAATAGT TTGTGATAATTCCAAGTCTATCTCCACCATAAATATTACAAATCTTGGACTAAAAGGTACTCTTCACAGTCTCAACTTCTCATCCTTTACTAACTTGTTG AGTCTTGATATAAGTAACAACTCTTTCAATGGATCTATTCCTAACCAAATTGGTAACTTGACCAACTTGGCAATTCTAAATTTTACATTGAACCAACTTT CTGGCTATATTCCTCAGGAGATAGGAGAGTTGAGAAAGTTGAGGTATCTATTGTTTGGATCAAATCACCTTTCCGGTTCAATTCCTCCAACAATTGGAAT GTTGATAAATCTTATTGAACTTGATATGTCAGATAACTCTTTGTCTGGCACAATCCCTTCAATAAGAAACTTGAGAAATTTAGAACAACTTAGGCTATTT AACAACAGTCTCTCTGGCTATATTCCTAATGAACTAGGAAAACTCGATGCTCTCGTATCAATCATGTTGTCGAACAATATTTTGTATGGGCCAATCCCAC CCTCCATAGGAGATTTGGTCAATTTAACTAACTTTGAATTAGAGAATAACACAATTTCTGGATCAATTCCTTCTACTCTTGGAAACTTGACCAAGCTCAC CGGATTTAATATGGGCACGAACAATCTTTCTGGATCGATTCCTAATGAACTAGGAAACTTGGTCAATCTAATTGCGATCAACCTTGCAATAAACAATCTT TCTGGACCTGTTCCTTCAACCTTTTGTAATTTGACAAAGCTCCAATTCCTATTATTGTATGAGAACAAACTTGAGGGTAGACTACCATCTGCATTCAATA ATTTTACCAACTTCCAAAGCTTACAACTATCTTCTAATAGTTTCACTGGCCCCTTACCACAACAGATTTGCCTTGGTGGGTTACTTAGAAAATTTTCTGC TAACCATAACTTTTTCACCGGTCCCATTCCGATAAGCTTAAATAATTGTTCCAGCCTTGGTAGACTCAACCTTGCAGGAAACTTGTTGAGTGGAAATATA ATCAATGATTTTGGTGTAAGTCCAAGACTCTACTTCGTTGAACTGAGTAACAATAACTTTTATGGTCACCTTTCACCAAATTGGGCAAAGTGTCCTAATC TCACAAGCCTTAGAATTTCAAACAACAACTTATCCGGGCTTATACCACCAGAACTCGGCCAAGCACCTAAGTTACAAGTACTTGATCTCTCTTCAAACCA TCTAACAGGGAAAATTCCTACAGAACTTTGTAACTTGAGCTCATTGTTTGAACTCTCCATAAGTAACAATGATCTTTCAGGCAGCATCCCCGTAGCGATA GGATCTTTGATGGAACTGAAAATTTTGAAGTTGGCAGCAAATAAGTTAAGTGGCTCAATCCCAACACAGGTTGGAACGGTTCAGAATTTAGTTCACCTGA ATTTGAGTAAAAATAAGTTCATGAAAGGCATTCCCTTTGAACTTAACCAATTGCAATATCTTGAAAGTCTTGATCTTAGTTGGAACTTGTTAAATGGACA AATACCAGAAACCCTTGCAAGGTTGGAAAAGCTGGACATGTTGAACCTCTCGCACAATAACCTCTCTGGAAGCATTCCATCTGATTTTAAGGATATGCTC AGCTTGAGATATGTTGACATATCTAACAACCAGTTAGAGGGTCCAATTCCTAACAACCCAGCCTTTCTTCGGGCTCCGGTTGATGCATTGAAAAATAATA AAGGCTTGTGTGGTAATGTATCTGGCTTGATGGTTTGCCACGAGACGAGTCACAACCGCCATGGTCAAAAGAAAAAAACTATGATACTGGCATTATCTTT TACTTTAGGTGCTCTAATGCTAGTGGTAATAGTGGCTGGAGTTTTGTTATGTATTCATTGGCAAAGTCCTAGGAAATCTGAGAAGCAGGCTACAGAAGAA CACAGTCAAGAACATTTTTCGATTTGGAGTTATGATGGGAAAATAATGTTCGAAAATATCATTCGAGCTACAGAGCAGTTTGATGACAAATATATCATTG GAGAAGGAGGGACTGGAGCTGTTTACAAAGCTAAATTGCCCAAAGGCCAGATTGTTGCTGTGAAGAAATTTCAAGCCGAAGTGGATATGGAAATGCTTGA TTTAAAATCTTTTACAAGTGAGGTTCGAGCCTTGACAGAACTCAAACATCGTCACATTGTGAAGTTACACGGATTTTGCTCGCATTCACGCTTCACTTTT CTGGTTTATGAGTTCCTAGAAGGGGGGAGCTTGGATAAAGTACTAAACAATGACACACATGCAATGATGTTTGATTGGAATAGAAGGGTGAATGTTGTTA AAGGTGTGGCAGATGCTCTATACTATATGCATCATGGTTGCTCTCCTACTATAATTCATCGTGACATATCAAGCAAGAATGTCCTACTAGATTTGGAATT TGAAGCCCGCGTCTCCGATTTCGGAACGGCTAAGTTTCTGAATCCTGATTCACACAACTTTACCTCATTTGCAGGCACATGTGGTTATTCTGCACCAGAG CTAGCTTATACTATGGAAGTGAATGAGAAATGTGATGTCTTTAGCTTTGGAGTGGTTTGCTTGGAAATAATCATGGGAAAGCATCCTGGAGATCTTATTT CTTCAATGTATTCATCATCTGGGAAGCCAAAAGTATCTAACTTGTTATTGATGGATGTGTTGGACCAACGGCTTCCTCATCCATTGATGCCAATTGATGA AGATGTGATCTTGGTTGCAAAAATAGGATTTGCATGTTTGAATGAAACTCCACGTTTTCGCCCAACTATGGAACAAGTTTACAACCAGTTTGTGATGCCA AAATCAGCTATGGTTGACCCATTCCCTATGATCACACTTGGACAACTACTTAAGTGAAACTATTAGTCTGCGAGAAGAGAATAAAGTATCTCCTTATACA AACAGATAATTTATTTCCTTACATCATTTTGTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_46174; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_94133
Blastp | MDIS1-interacting receptor like kinase 2 from Arabidopsis with 44.17% of identity |
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Blastx | MDIS1-interacting receptor like kinase 2 from Arabidopsis with 44.17% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT4G08850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460984.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |