Ll_transcript_92654

• Id Trinity: FTRINITY_DN54845_c1_g4_i3
• Name Transcript: Ll_transcript_92654
• Sequence: CTCCAATTTATTTCTTTCTATATTCATTTCATGATTTCAACAAAGTTTAGTTTTATATGAATCAAAATCTTCAAATTGAATAAGCTGATTTTTGACCCGG ATCGTGACGGGTGAGTTTAAACGGGTCGAAGCTTACCCATAGAGTGAGTTTACTCATCAAGTTTTTCTCTTCTCCCATTTCTGCAGCCATAACAAAGAAA CATAACAATGAGTGATATTCGAAAGTGGTTCATGAAGTCTCATGCCAAGGTCAATGACAGTGCTTCTAAGCCTTCTTCCGATGATAAAGTCCAGCCTCAG AAAACGGCGCCTGGAGCCGAAGAAAGTTCAGGTTCCGGGAGGAGGAAGACTAGTAAATATTTTGATAAAGACAAAGAAAAGGTGAAAGAAGAGAAAGAAA CACCGAAGCTCCCTGCTAAAAGAAAGAATGTGAAAGACAGCGAGGAATTACAGATACCCCGCCCTTCAAAGAAAATTCATGAAGCGGATGAAGACAAGTC TGCCATGCCCACATCTTATAACAAGCTTGCTGACTCCACTCCTGCAAAAAAATTAAAGAGTGGATCAGGTAGGGGGACCCCCCAGAAATCTGCAGAGTTG GAAGAAAATGATGAAGACGACGACAAAGATAATGTTACTCCAGCTAAATCTGGTGGTAGGGGTCGGGGTGGACGAGGGGCATCAACACCATCAACTGGTG GTCGGGGTAGAGGGGGTGGTAGGGGTGGATTTATGAATTTTGGTGAAAGAAAAGATCCTCCACATAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTAC CTGTTTAGCTGGCTTAACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCCGAAGACTTGATTAAACGCCATGGTGGCCGTGTTACA GGATCAGTCAGCAAGAAAACAGTTATGCAATGCTTTTTCTTCAACTCTAATTCAATTTACATAATCAGCACGTGACTGACATCCTTTGTTTTCAGAGTTA TCTGTTATGTGATGAAGACATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTTGGGACTTCCTTCCTCACAGAGGATGGATTGTTTGATATAATTCGT GCATCAAAACCTGTTAAAGCTCCTTTGAAAGAAGAACCCAAGAAACCTCTGGCTAAGGCTGTTGCATTAGCATCCCAATCAAAAGGTCCTCCAAGAGTAG AAGCTAAGGTCTCTCTATCTTTGTCCTCGCCTTCTACCCAAGCCAAGCCAAAGACAGCAACTATTACTCAATCTTCTTCGACGTGGACAGATAAACATCG ACCTAAAAGTCCTAAGGACATCATAGGGAATCAGTCACTTGTTTCACAGCTTCGAAATTGGTTGAAAGCATGGAATGAACAATTCCTCGACACTGGTAGT AAAAAAGTAGGTAAAAAGCAAACTGGATCTGGTTCCCAAAAAGCTGTCTTGTTAAGTGGAACGCCTGGCATAGGAAAAACAACTTCAGCAAAGTTGGTCT GTCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGATAGCCGTGGAAAAGCTGATAGCAAAATTGGAAAAGGAATTAGTGGAAGCACTAAGAA TTCTGTCAAGGAACTTGTAACCAATGAGTCCCTTGGTGCTAATATGGATCGGTCAAAGCTTTCTAAAACTGTGCTCATTATGGACGAGGTTGATGGGATG TCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAAAAAC TAAAAAGTCTTGTGAACTACTGTTTGCTTCTTAGTTATCGAAAACCTACAAAGCAACAGATGGCAAAGAGGCTGATGGATGTTGCAAAGGCTGAGGGGCT TCAAGTTAATGAGATTGCTCTTGAGGAACTCGCAGAAAGAGTTAATGGAGATATGCGCATGGCAATAAATCAGTTGCAATATATGAGCCTCTCCATGTCA GTTATTAACTTTGATGATATCAGGCAGCGCTTTCTTAAAAATTCAAAGGATGAAGATATTTCGCCATTTACAGCTGTTGATAAGCTTTTTGGTTTTAATG CTGGGAAATTGAAAATGGATGAGAGGAATAATCTTAGCATGAGCGATCCTGATCTTGTTCCTCTTCTTATCCAGGAAAATTATATTAATTATAGACCAAG CGGGGCTGGTAAGGATGACAGTGGTATAACACGCATGAATCTGATTGCCCATGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAAATTCGA AGATATCAACAATGGCAGCTTTCTCAAACTAGTTCTGTCGTATCGTGTATAATTCCTGCTTCATTACTGCATGGGCAAAGGGAAATACTCGAACAGGGAG AACGGAATTTTAATCGGTTTGGTGGGTGGCTTGGGAAGAACTCGACAAGGGGTAAAAACATGAGACTTTTGGATGATCTTCATGGCCACATTCTTGCTTC TCGTGAAACTAGTCCGGGAAGGGATACTATACGCTTGGAATACCTGACTCTGCTTCTTCAACACCTGACAGAACCACTGAAAACCCTGCCCAAGGCTGAA GCTGTTGAGAAAGTTGTGGAATTTATGAATACATATTCTATCACTCAGGAAGATTTTGACACTATTGTGGAGTTATCAAAATTCAAGGGTCATCCTAATC TTCTAGACGGCATACCACCCGCCGTCAAGTCAGCCTTGACAAAAGCATATAAGGAGCAAAGCAAATATCGGATGGTGCGAGCTGCAGATCAAGTCACTCT TCGGATGGTGCGAGGTTCAGATCGAGTCACTCTTCCTGAAATAAAGAAGGCCCCTAAGAAGCGGATTGCTGCTATTCTAGAACCAGCTGATGAAGGAATG GAACAAGGTGAAGGTGAAACCTTGGACGAGAGTGAAGATGAGAACACCTCTGACACTGAGGAGTTGGGCCCTACCGCTGGGGAGAAACTGCAGTCGGAAC TTCAAAGCTTGAATTCAAAAGCCGTTCAAGTACAATTGGAGTTGAAGGGAACAGGCAATTCGAGTTCGAAGAAGCCATCTGCTGGTAAAGGAAAAGGTGC TTCTGCATCTGCACAAAAGGCTGGCCAAACATCAAAAAGAAAAAGGTGAAGGAATATGCACACTAATGGGAAGATTTGTATATGGACCTTGTTCTTCATG TAATTGATGTTAGGCATTTGTAATAATTTTTGGTTGACTTTTACTGAATTTTCCAAGGAGAGTACCGAGAAACATGGATTGGTTGTGTTTTTTTTAATGG AACATGGGTTGTACATGACGATGATCCCTGCTAATTTGGGCAACATATCTCATCGCTGATTGAGCTGCAAACTTCCCTGTGGGACATATTGCGAGCAAAT TCCAAATTATCACTATCTCCACTCTTCATAACAAAGGTGTGTGTCCGTGTGAAACTATTCTAAGGTATATAAAACTATTCAAAGTTCTCAATACCTTAAA AGTTTGGGATGATTAACCCTGG
• Tissue: flowers
• Gene name: LI_gene_46216;
• Additional information: details;

Expression of Ll_transcript_92654

FPKM

• FPAB: 0.3
• FPNAB: 0.5
• LF1: 0.7
• LF2: 0.1
• LF3: 0.4
• LF4: 0
• UF1: 0
• UF2: 0.1
• UF3: 0.2
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_92654

• Blastp: Replication factor C subunit 1 from Arabidopsis with 69.61% of identity
• Blastx: Replication factor C subunit 1 from Arabidopsis with 66.43% of identity
• Eggnog: replication factor c(COG5275)
• Kegg: Link to kegg annotations (AT5G22010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413096.1)
• Pfam: Replication factor RFC1 C terminal domain (PF08519.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;