Id Trinity | FTRINITY_DN54849_c1_g1_i2 |
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Name Transcript | Ll_transcript_92876 |
Sequence | CACTCCATAGATATATTGAGAGAGAATCAGAAAACCTTCATTATCGATCATCCCTTAGCTTCTTCTTCTTCTTCTTCTTCGACGATCATGTTACGGGTAC GAGGATGATTGAGTATATTTTTGGTTATTGAATGGATTACACTGCTAGTGTTATGCTGCAATTATTGTGACATTTATTGATTGCGAGATATTATGGGGGG AGCCTGTTCTAGGAATCAAGACAGGGGTAATGAAGATAATTCTCGTAGGGTACTTTTGCGAAGATTTTCCAAAAGTGGGAGTTTGAGATGGTGGGCATCC TCATTTTCTTGTCCATCTGTAGACATCCAGTTACGAAAGGGAGAATGTCCGTCACTGCTGGAATTGTGCATCTTGAAAATAAATCAGGATATTGACAAGT ATGGCACATTCTCTATGTTGCCACGGGATATAAGTCAGCAAATTTTTAATAAATTGGTATTCTCCCAGCGTCTGACTGATGTTTCCCTTGAGGCATTTCG AGATTGTGCTCTCCAGGATTTTTACTTAGGAGAATATCTCGGTGTCAATGATGCTTGGATGGATGTCATCTCATCACAGGGTTCATCTTTGCTTTCTTTA GACCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACTTATCTGAAAGATTGTGAAAATCTCATGTCTTTAAATCTAAATTACTGTGACCATATTTCAG ATCATGGACTGGAGGGCATCAGTGGTCTGTCAAGCTTGACAACTTTGAGTTTTAAAAGAAACGATTCAATATCTGCTCAAGGAATGAGTACCTTTTCTGG TCTTGTTAACTTGGCCAAATTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGTCTTGTTCATCTTCAAGGTTTGACCAAGTTGGAATCTCTCAATTTA AAGTGGTGTAATTGCGTAACAGATGGTGATATGAAGCCTCTATCAGAGCTTGCAAGCTTGAAAAGTCTAGAGATTTCTTGCAGTAAAGTGACTGACTTTG GCATCAGTTTTCTGAAAGGATTGCAAAAGCTTGCCCTGTTAAATCTGGAAGGTTGCCTGGTGACCGCTGCATGTTTGGATTATCTTACAGAGCTTTCTGC CCTATCAACCTTGAATCTTAATAGATGTAATCTTTCTGATGTTGGATGTGAAAAGTTTGCAAGACTGGAAAATTTGAAAGTACTAAACTTGGGATTTAAT GACATAACGGATGCATGTTTAGCACACTTGAAAGGATTAACAAAATTGGAGAGCTTGAATCTTGATTCATGTAGGATTCGTGACGAAGGATTGATCAACT TGGCAGGCCATAGGAAATTGAGCTGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_46251; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_92876
Blastp | F-box/LRR-repeat protein 14 from Homo with 34.74% of identity |
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Blastx | Internalin-A from Listeria with 35.59% of identity |
Eggnog | protein ubiquitination involved in ubiquitin-dependent protein catabolic process(ENOG410YK3H) |
Kegg | Link to kegg annotations (144699) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456694.1) |
Pfam | Leucine Rich repeat (PF13516.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |