Ll_transcript_93007

• Id Trinity: FTRINITY_DN54856_c2_g1_i1
• Name Transcript: Ll_transcript_93007
• Sequence: ATGATATTAAGCTAATGTTGAAGATATGAATTAATGAACCACACTCCCTCAACTTGTTATTCTCACCATTCTCATCCATGACCCTCTGAACTCAACTTCA CTTCACTTCCTCATTCATGGCTATTCGTGCCTTCAACCCTCGCTACTCCCTCTTCTCTTCTCCCACTCCCACTCTCTCCTCCTTCCTCCACCGCCGCCAC ACCGTTCCCCGCTGCTTCCGCTCCCTTCCGTTCCCTCCTCAACCGCCGTTCCTCTCCGTTTACCGCCGTCAAATTCGCTCCGTTCATGGCCTCTTCGATA GCGTCATGGAGGAGCTCCAGGCCATGCGCAAACGCAGGAAAATAGTTTCCAATGCTTCCAAGTCCATCATGGGATTGTTGAATGAAGAACTTGTGGAAGA TAGGATTGTCAACCGTTCATTGCAAAAAGGGTTGCTTTTGGAGTTCAAGGGGGATTCTAATAGAATATTGTTAGTGGTTTCTCAAAGACCCGATGGCAAG AAGAAGTGGATGGTTTCTGATCAGAATGGTGTCACTTCTTCCATTAAGCCACGTCAAGTAACCTACATTGTTCCTGGTATTCACAATTTTGACCCAGCAG ATATTGCAGATTTTGCTCAGAAAGCTCAGGACAACATGGATTTGTCACTACTTGAATTTGCTTGGGCTGAGCTCCTTGAAAAGAATAAATCTGTGACAGT TGAAGAGTTAGCTGAGATGATTTTTGGCAGTGCTGAGCCTCTTGAGAGCTATTCTGCTCACATGTTGCTGTCAAAAGATGAAGTATACTTCACTGTGCTT GAGAATAAAGGACCTTGTTCCATCTATGGACCTCGACCTAGTAAGGAGGTTGAGGAGCTTATTCGTAGGAAACTTGCAAAAGAAGCTTATGAGAAAGAAT TTCAGGAGTTTATTGAATTGCTGGCATCCGCAAAATCGATGCCTTCACAAGATAAACCTCCTAAATCTTCCTGGATGGATGAGGAGAAAATTCGGAGTAG AATTGAGTCACTTGAAGCATATGCTATTGATGCATGTAAAAATGACGAACAAAGAAAAACAGCTGAGATGACACTTACGGAAATAGATCTGGCAAAAACA GCTTCTTCAGCTGTGAATCTCCTAGTAGATATTGGGTATTTTCCTGTACACGTCAATCTTGATTTGTTGAAGTTGAGTATTCCCACTGATCATTCAGCTG AAAACATATCAGTTGCTCAAAGTCTTCTATCAAACTCATATGATCAAGATGAGATCAATAGGAAGAATCTTACTGATTTAAAGGTTTATGCCATTGATGT TGATGAGGCTGATGAGCTTGATGATGCTCTGAGTGCAAAGAAGTTGCAAGATGGTCGAATTAAAGTTTGGATACATGTTGCAGACCCAACTAGATATGTT GAAACTGGGAGCATTATGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCCACATATCCTATGTTTCCAGAAAAGCTTGCGATGG GGGGTATGAGTTTGCGACAAGGAGAGCTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATAATGATGGCAGCATTGCAGAATGTTCAGTGGTTAACTC AGTGATTAAACCAACATATATGCTGACATATGAGAGTGCATCTGAGCTACTGCATTTGAACCTGGAGGAGGAGGGCGAACTCAGAATTTTGTCCGAGGCT GCAAACCTTCGTTTAAATTGGCGCCGTCAACAGGGTGCTGTTGACACAGCAACATTAGATACTCGCATTAAAGTGTCTAATGCAGAGAGTGAAGAGCCAT TAATAAATATTTATGTCGAAAACCAGGCAGACCCAGCAATGCGACTGGTCTCTGAAATGATGATACTCTGTGGTGAAGCCATGGCCACATTTGGGTCCCA TAATGATATTCCTTTACCCTACAGGGGACAGCCCCAGTCACATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTG GTCAAAGTAATGCGTGCTGCACAACTTGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACATCTCCCATCCGTA GATATTTGGATCTTCTGGCTCACTATCAGGTAAAGGCATTCCTTAGGGGTGAGCCTCCACCATTTTCACCCGGCAAGCTTGAAGGAATAGCAGCAGTAGT AAATATGAAATTTAGAGCAGCGAGGAAGCTCTGCAGCAGTAGTCTTCGATACTGGATATTGGAATATTTACGAAGACAACCAAAAGAGAAAATATATCGA GCATTGGTACTTAGATTTATTAAAGATCGAATTGCAGCTCTATTGTTGGTTGAGGTTGGATTTCAAGCTTCTACCTTGGTCTCTGTTGGAACTCACATAG GGGATGAAATATTAGTTAAGGTCGAAGAAGCACATCCTCGTGATGATATTATTTTTCTGAAGGAGGTCATAAAAGGTTGACTTAAGAGTTAAGAAATGTT TATGAGAAAGGCTTCCAATGTAAAAATTATTCAAAAAGGTAATCAACTTTCTATGCATTCCTCCCAATTCTATATTTTTGTCAACGACAGCGAACCAAAC CGTCCTCACTCAGCTGGGCGGCTAGGATGCTCCCTCATCTTTTGGCATCGAAGAAATATCACGCTTCACCGGAAAAATCTCAACCTTTTAAACTTTGTCA AGCTGTTCAAATTTTGTAGTACCATTCTGGCAGAGAAATTCAGGATAGTTCTAGCCAGCATATCCAACCTTCATCACTCCGGCAGTGTACAGTCCTTCTC ATTGTATCTGATCATACGGCGGCATAAAGTTAGCAGGTTTTCTCCCTCATAAGCGAGCAAGATTTGTCGGTTCCGTTGATTTGGTAAGTATTTCCTTGGC ATGAGCTAGTTATAGTAATTTTTCACCTTTTCTACCTGAGAATTCATGGTTAAGATTTTATTTCATTAATTTACTTTCTTGTATATGCCAGGCTTTGCAA CTTTACATAAATATGTAATTGAGTTTCATTATTGTAATCTTACACACTTTGTGCCAAAAGATATAAGGATCTGAATTGCAAGTTGCAATACAGGGTCATA TGAAGAGACATTTATAACTATAATTTATTATGAAGAGGATATGAGGGAGTCGACAAGTGTTGGAATCCGT
• Tissue: flowers
• Gene name: LI_gene_46314;
• Additional information: details;

Expression of Ll_transcript_93007

FPKM

• FPAB: 0
• FPNAB: 0.7
• LF1: 0.7
• LF2: 0.6
• LF3: 0.7
• LF4: 0.8
• UF1: 0.6
• UF2: 0.4
• UF3: 0.6
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_93007

• Blastp: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 64.22% of identity
• Blastx: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 68.08% of identity
• Eggnog: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
• Kegg: Link to kegg annotations (AT5G02250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464581.1)
• Pfam: RNB domain (PF00773.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;