Ll_transcript_93012

Id TrinityFTRINITY_DN54856_c2_g1_i6
Name TranscriptLl_transcript_93012
SequenceATGATATTAAGCTAATGTTGAAGATATGAATTAATGAACCACACTCCCTCAACTTGTTATTCTCACCATTCTCATCCATGACCCTCTGAACTCAACTTCA CTTCACTTCCTCATTCATGGCTATTCGTGCCTTCAACCCTCGCTACTCCCTCTTCTCTTCTCCCACTCCCACTCTCTCCTCCTTCCTCCACCGCCGCCAC ACCGTTCCCCGCTGCTTCCGCTCCCTTCCGTTCCCTCCTCAACCGCCGTTCCTCTCCGTTTACCGCCGTCAAATTCGCTCCGTTCATGGCCTCTTCGATA GCGTCATGGAGGAGCTCCAGGCCATGCGCAAACGCAGGAAAATAGTTTCCAATGCTTCCAAGTCCATCATGGGATTGTTGAATGAAGAACTTGTGGAAGA TAGGATTGTCAACCGTTCATTGCAAAAAGGGTTGCTTTTGGAGTTCAAGGGGGATTCTAATAGAATATTGTTAGTGGTTTCTCAAAGACCCGATGGCAAG AAGAAGTGGATGGTTTCTGATCAGGTTCTAGTAGAAACAACATAATGCGGCATGTTTAATAGAATGGTGTCACTTCTTCCATTAAGCCACGTCAAGTAAC CTACATTGTTCCTGGTATTCACAATTTTGACCCAGCAGATATTGCAGATTTTGCTCAGAAAGCTCAGGACAACATGGATTTGTCACTACTTGAATTTGCT TGGGCTGAGCTCCTTGAAAAGAATAAATCTGTGACAGTTGAAGAGTTAGCTGAGATGATTTTTGGCAGTGCTGAGCCTCTTGAGAGCTATTCTGCTCACA TGTTGCTGTCAAAAGATGAAGTATACTTCACTGTGCTTGAGAATAAAGGACCTTGTTCCATCTATGGACCTCGACCTAGTAAGGAGGTTGAGGAGCTTAT TCGTAGGAAACTTGCAAAAGAAGCTTATGAGAAAGAATTTCAGGAGTTTATTGAATTGCTGGCATCCGCAAAATCGATGCCTTCACAAGATAAACCTCCT AAATCTTCCTGGATGGATGAGGAGAAAATTCGGAGTAGAATTGAGTCACTTGAAGCATATGCTATTGATGCATGTAAAAATGACGAACAAAGAAAAACAG CTGAGATGACACTTACGGAAATAGATCTGGCAAAAACAGCTTCTTCAGCTGTGAATCTCCTAGTAGATATTGGGTATTTTCCTGTACACGTCAATCTTGA TTTGTTGAAGTTGAGTATTCCCACTGATCATTCAGCTGAAAACATATCAGTTGCTCAAAGTCTTCTATCAAACTCATATGATCAAGATGAGATCAATAGG AAGAATCTTACTGATTTAAAGGTTTATGCCATTGATGTTGATGAGGCTGATGAGCTTGATGATGCTCTGAGTGCAAAGAAGTTGCAAGATGGTCGAATTA AAGTTTGGATACATGTTGCAGACCCAACTAGATATGTTGAAACTGGGAGCATTATGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCAC TGCCACATATCCTATGTTTCCAGAAAAGCTTGCGATGGGGGGTATGAGTTTGCGACAAGGAGAGCTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCAT AATGATGGCAGCATTGCAGAATGTTCAGTGGTTAACTCAGTGATTAAACCAACATATATGCTGACATATGAGAGTGCATCTGAGCTACTGCATTTGAACC TGGAGGAGGAGGGCGAACTCAGAATTTTGTCCGAGGCTGCAAACCTTCGTTTAAATTGGCGCCGTCAACAGGGTGCTGTTGACACAGCAACATTAGATAC TCGCATTAAAGTGTCTAATGCAGAGAGTGAAGAGCCATTAATAAATATTTATGTCGAAAACCAGGCAGACCCAGCAATGCGACTGGTCTCTGAAATGATG ATACTCTGTGGTGAAGCCATGGCCACATTTGGGTCCCATAATGATATTCCTTTACCCTACAGGGGACAGCCCCAGTCACATATTAATGTTTCTGAATTTG CACACCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTGGTCAAAGTAATGCGTGCTGCACAACTTGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGG AATTCCTGGTTATGTTCAATTTACATCTCCCATCCGTAGATATTTGGATCTTCTGGCTCACTATCAGGTAAAGGCATTCCTTAGGGGTGAGCCTCCACCA TTTTCACCCGGCAAGCTTGAAGGAATAGCAGCAGTAGTAAATATGAAATTTAGAGCAGCGAGGAAGCTCTGCAGCAGTAGTCTTCGATACTGGATATTGG AATATTTACGAAGACAACCAAAAGAGAAAATATATCGAGCATTGGTACTTAGATTTATTAAAGATCGAATTGCAGCTCTATTGTTGGTTGAGGTAAGCAG CTAATGAACCTATTAGATAATCTGTTTTGAAGTGCATATCAATTGTTGATTGTCTCACTGGTTAATCACAGCATTGTATTAAACATGTAGATGGGATAGC TGCCTTAAAAGAGCAGCATTTCTGATTAGTTGGGAATGACTTAATTTTTTTTAGATGAATAGTGAAACATGCCGAAGTGGACCCTAAGTGCTATGACTAA AGTTGTTGCCGCGTGAATAAGAGGTTCATAGGTTTGAATCTGAAATCTGTCTCTTGTGAATGCGAGGTAAGGCTGTCAACTGTAGACCCACATAGTTGGT CCAATCCTTTCCTTTGGATCCTACATGTTGGGGAGTTTTTTTAGCCCTACATTTAGGGGCGGAAATGAGATGAGTCGAACTTGGCTCAGCTCAGCTCGAC TCATTAAGGATCGGCGTGAGTCGAGTTTCTATCCGAGATTCCGAGTTCAATGTCGAGCTATTTTTTCAGCTCAAGTTCGGCTCACAAAGAAGCTTAAAAA ACTAGCATTTCGTTCCAACCAAATGCTCTACTGAACCACAAAGCGTGTAAATTGCCAAAATTTTAGCTTCCTGCCAGAGATAACCCCCCTAAACTTGATC CTCAGGAACATTTTAAATCTCTGAGGCAAACCTACTCTACACCAAAAAACACCAACCTTATTCTGAAGAGAGGAAGCCACTAAGCAATGAAAAAACAAAT GAGAACCAGTTTCTGAACTAGATCTCCACATTACCCACTGGTTAGGAGATAAAGTAGTAGGAGGTCTTCGTACAAATCATTTTCTGTTAAGCAGAACTGT CCAAAGGATTTGCCCTAGGGGGAGAAATCTAGGAAGCCTTCTAGTTATTGAAGTGTCCCATTGTTGGACACATTTCCAAAACTGAAACTCCTCCGAATTG TGTAAGATACTCCTCTGAAGGTCTCCAATTAAAAAAATGTTTTTTGTTGGGTCAGACTCCTGACAGGCATGGCTTGGACTCTTAGTTGACACCCCAAAAT AGCTAGACACCTTCAAGGACACTTATGCAACTGAATCTCACATATAGAGCCCGAGTCTCAGTAGAGGCCATCCCGATACATCGTTTTTGGTGTCAGCTGC TCCACAGGATTGACTACATATCTATTGTCTTGGCATCCTATATTTTTTACATTGTCTATATCCGAGTGTGTGTCGTACCTGGTGTTGAAGATGGAGTTCA TACTTGATTTCTATACAGACTTATCCAAAAGAAAAGAGACATTAACCATCCGACCTATTGGAGTGCAAATCTTACATATTATGCATACTTCCTTGCTTGA CCATTTTACTTGGTTTTTTTCCTGTGAAAAGCTTATTAGAATCATTGTTTACGCCAATGGCCCCATGCCCAGTTTTTACAAGATTGTTTCGTTTTGTTTG GGAGGAAATTGAATTTTGTATAGCTTGATCAAAGTGTTTTCCCCGATACCAAGGTGCATATTTGATAACTGAGCACCTGGTAAAATTATAAATATGTTTC TTATATGTAATTGAAAAGATTGACATTGTCAAACCAGTACAGAAATTAAAATGATGTTATAATGTTCTAGTATTGTTTTACATAAATGTGTTTTATATAT GCCCTCCCCTCAGAGGTATTGCTTTTACTAGTGTTTTCAGTCCATGTTTAATTTCGTTAAAAAGGCGCAACTTTGGCACCTGGTTGATTCTCATTTTGCA GGTTGGATTTCAAGCTTCTACCTTGGTCTCTGTTGGAACTCACATAGGGGATGAAATATTAGTTAAGGTCGAAGAAGCACATCCTCGTGATGATATTATT TTTCTGAAGGAGGTCATAAAAGGTTGACTTAAGAGTTAAGAAATGTTTATGAGAAAGGCTTCCAATGTAAAAATTATTCAAAAAGGTAATCAACTTTCTA TGCATTCCTCCCAATTCTATATTTTTGTCAACGACAGCGAACCAAACCGTCCTCACTCAGCTGGGCGGCTAGGATGCTCCCTCATCTTTTGGCATCGAAG AAATATCACGCTTCACCGGAAAAATCTCAACCTTTTAAACTTTGTCAAGCTGTTCAAATTTTGTAGTACCATTCTGGCAGAGAAATTCAGGATAGTTCTA GCCAGCATATCCAACCTTCATCACTCCGGCAGTGTACAGTCCTTCTCATTGTATCTGATCATACGGCGGCATAAAGTTAGCAGGTTTTCTCCCTCATAAG CGAGCAAGATTTGTCGGTTCCGTTGATTTGGTAAGTATTTCCTTGGCATGAGCTAGTTATAGTAATTTTTCACCTTTTCTACCTGAGAATTCATGGTTAA GATTTTATTTCATTAATTTACTTTCTTGTATATGCCAGGCTTTGCAACTTTACATAAATATGTAATTGAGTTTCATTATTGTAATCTTACACACTTTGTG CCAAAAGATATAAGGATCTGAATTGCAAGTTGCAATACAGGGTCATATGAAGAGACATTTATAACTATAATTTATTATGAAGAGGATATGAGGGAGTCGA CAAGTGTTGGAATCCGT BLAST
Tissueflowers
Gene nameLI_gene_46314; 
Additional informationdetails; 

Expression of Ll_transcript_93012

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_93012
BlastpRibonuclease II, chloroplastic/mitochondrial from Arabidopsis with 71.53% of identity
BlastxRibonuclease II, chloroplastic/mitochondrial from Arabidopsis with 70.96% of identity
Eggnog3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
KeggLink to kegg annotations (AT5G02250)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019464581.1)
PfamRNB domain (PF00773.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;