| Id Trinity | FTRINITY_DN54858_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_93820 |
| Sequence | CCCACTCACATTTTTACTTCATACCAGATTGGTTGTTAAGGGGACACCAAACTTAGGTTCCATGAGTTTGTAGACTAGTTGGGTTTGCTGACTAAGATTA CTGCTTGTCAAATCCATACAGGCAAACACAGCGTCCAATATATGACAATAGTGCTTGATTAATACTCTGATTAGTATGTGGAAATGAGTATCAATAACAT CCGGAAGTGATTTTTGCAAACTGAGTTACAAGTTTTTTCCATTGTTAATAACCGGACATACAGTTTGTTTTAACAGTTTACTGCTTTCTTTAACCCATGG ATCGTGGATGGTGTCTAATTTTGTTGTTAATCTGGTCACTGGGTACACAGGTTGTTGATCAGATGCAGTCAGGTGATAAATCTAAAAGAGAAGGTTGGCT AACAGAGTTACCAAGCACAGGACTAGGAAAAACCGTCCTTGAAAAAATGAACGAAGAGAAAAAAAATGATCCGGTTTGGCAAGGCAAATGTTCTGGTACA GTCTACATTGGAGGAAGTGAAGCTGATGCACATTTTTTTGTGATAAACGAGGCATGCTCAATGTTTTCACATACCAATCCCTTGCATTTGGATGTATTCC GGAGTGTAGCACACTTTGAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAACATAGTTCTGGAGGACAAATATGTGGCAATATGAC ATCAGGAGGGACTGAAAGTATATTATTAGCTGTCAAAACATCTCGTGATTATATGAAATCTAAGAAAGGGATTACAAGGCCTGAAATGATAATTCCTGAG TCTGCACACTCAGCGTATGACAAGGCCGCCCAGTATTTTAATATCAAATTATGGCGTGTTCCAGTTAGCAAAAATTTTCAAGCAGAAGTGAAAGCAATTA GACGTCGTATTAACAAAAATACCATTATGATTGTTGGATCTGCTCCAGGGTTTCCTCATGGAATTATTGACCCCATTGAAGAACTTGGTCATCTCGCATC AAGCTATGGTATTTGTCTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCCCATTCCACCTTTTGATTTTTCT GTTAAAGGAGTTACTTCTATATCAGTGGATGTGCATAAATATGGATTAGCCCCCAAAGGAACAAGTATTGTTCTATATAGGAACCATGAAATCAGAAAGG TAAGTCATTGATTTGTTCAGAAAGTATCTGGCAATGACAGAAAAATTACTTTTTTAATTCTAAAATTTGAACCTGGCTTCCTCTGTTATTGGAAAACTTG TTGTTGGCTTATTTGCAGCTGATTACTAATGTGTTTTCTTTTTGGCTTCTGGACTCCACAGCATCAATTTGTTGCCGGTAAGTTTGCAATTTGTTTCTAC TAAATATTTTGTCTTGGGGTTATTTTTACGAGTTTATTTTCGATGCATCTCTAGTGTATGGTTTTCTACATTATTAACCAGTCACATGTTATCCATAAAT GACTTTCACTGTAGCTATTATAAAAGTCAGATATTTTATAATGTGTTGATACATGATTAATTGATTGTTTAAGAAATGTTTACACCACCAGTGCATTCTA TTTAAATTCTATTTTTGTGCATAGAAATGTATATGTGTCTGTGTGTGTGAGAGAGAGAGAGGGGAGGAAATGCTGTATGTTATCGGGATTAATTGCATTG CGGTTTCTGCCCCGTGACTGATAATTTGTGCAAATGTCACAGTTACTGAGTGGAGTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGG AGGTCTTATTGCTGGAGCATGGGCAGCAATGATTTCTCTGGGAAAAGAAGGTCAAGTGTCCATATCCACTCTGTGCAGTGCCTTTGAAATAATAATTTAC TTTCCCTTTCGTCTAACTTTTATATGCCTAATATATGGTGTATGGACAATCAATGGTGCATTTTGTTCTACAGGTTACTTGAAAAATACAAAAGAAATTA TGGAAGCCTCAAAACAAATAGAGAAAGGTGTAGAGGAGATTTCCGAGTTGTTTGTCGTTGGAAGGCCCGACATGACAATTGTGGCTTTTGGATCTGATGT TCTGGACATATTTGAGGTCAATGACATCATGTCATCCAAAGGATGGCATTTGAATGCATTGCAGAGACCCAACAGGTTGAGCTAAGTGATGTAGCACACT GGCTAATATTTGGATTGAGTTAACCTTCATTTCAGTCTTTGAAAGATAATGTTATACACTGGATAGGTTCTTTAAAAGTTGTGCTACCAAGTCTTAAAAG ATTTAAACTTGTTAAACTGTAACCTTTATTTTTGACACCGAAGTGAAGCCGTTTTAAATTTTCAAAAGGATTTAACTGGTGACAACTTTTAAGGATCCAT CTATCGATACCATAATCTTTCTAATACCGAATTCAGGATTATTACAACTAAAACTATTTCTGTATTAGAACACTTGATTGATTATAGCTCATTTTTAAGA AACTGAAAACATTTTCTTTGCTCTGCTTGTATCAGCATCCATATCTGTGTGACACTGCAGCATGTTCCAGTTGTTGAAAACTTCCTCGGCGACTTGAAGG AATCGGTGAAAACTGTAAGTTCTTTACTTGATATCACACATGATTATTGACATTGTGATACCTTTTCCTGGGTCACCAACATGGTGGATCCACTTGATGT CTCAGTTTGTTTGATACATTGTCTACTGTCTTAATCAGATTGGTGTATTATTTCTATCTTTCCTTTTTCAATTTCAGGTGAAAGAAAATCCTGGTCCAAT AAAAGGAGGCCTAGCACCTATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCACAGTCCAGGAATTGCTGGTAGAGTATATGGATGGTACTTGCTAG TTGCCTATTGTCACATCTATCGCTTGTCGCTCCTTTTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46333; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93820
| Blastp | Sphingosine-1-phosphate lyase from Arabidopsis with 80.99% of identity |
|---|---|
| Blastx | Sphingosine-1-phosphate lyase from Arabidopsis with 80.34% of identity |
| Eggnog | decarboxylase(COG0076) |
| Kegg | Link to kegg annotations (AT1G27980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453056.1) |
| Pfam | Pyridoxal-dependent decarboxylase conserved domain (PF00282.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |