| Id Trinity | FTRINITY_DN54858_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_93816 |
| Sequence | ATTAGTCTTATAATCTTATCGACGCAAACATTGATTCTTCTTTCTTCTTCTTTTTCTTCTTCATTTCTCTGTTACTCTGCAACAATGGTGGATTCATTCT TCACTTTTCATTTCAATCGTTTCAGAATTTCCACCAATTCCTTCCTCTCACAATATGAACCTCTCGTTCTTATCACAGCTCCTCTTTTCTCTCTATTCAT CGCTCATTCAATTCGCTCCTTTTTCAATGTCTTTCATGATAAGGGATTCAAATCAACAATCATCACTTTTATCATGAACTTCATCAAATTGATCCCTGGC GTTAAAGGCTACATCCAAGCTGAGAAACAAAAGGTTGTTGATCAGATGCAGTCAGGTGATAAATCTAAAAGAGAAGGTTGGCTAACAGAGTTACCAAGCA CAGGACTAGGAAAAACCGTCCTTGAAAAAATGAACGAAGAGAAAAAAAATGATCCGGTTTGGCAAGGCAAATGTTCTGGTACAGTCTACATTGGAGGAAG TGAAGCTGATGCACATTTTTTTGTGATAAACGAGGCATGCTCAATGTTTTCACATACCAATCCCTTGCATTTGGATGTATTCCGGAGTGTAGCACACTTT GAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAACATAGTTCTGGAGGACAAATATGTGGCAATATGACATCAGGAGGGACTGAAA GTATATTATTAGCTGTCAAAACATCTCGTGATTATATGAAATCTAAGAAAGGGATTACAAGGCCTGAAATGATAATTCCTGAGTCTGCACACTCAGCGTA TGACAAGGCCGCCCAGTATTTTAATATCAAATTATGGCGTGTTCCAGTTAGCAAAAATTTTCAAGCAGAAGTGAAAGCAATTAGACGTCGTATTAACAAA AATACCATTATGGTATGAAGTTACTCAATCATGCCCAGTTATTTTTCTGATGCTTTTGGTGCCAATTTGATTTAAAAAATATATTTTCTGGTTCAGTCTT TTATATGGTATGTGAACTCCTAATAACTCGAATCCTTGTTGTCAAGTGAAACTGACTCATGATAATGCAGATTGTTGGATCTGCTCCAGGGTTTCCTCAT GGAATTATTGACCCCATTGAAGAACTTGGTCATCTCGCATCAAGCTATGGTATTTGTCTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTG CTCGTGAGCTTGGGTACCCCATTCCACCTTTTGATTTTTCTGTTAAAGGAGTTACTTCTATATCAGTGGATGTGCATAAATATGGATTAGCCCCCAAAGG AACAAGTATTGTTCTATATAGGAACCATGAAATCAGAAAGGTAAGTCATTGATTTGTTCAGAAAGTATCTGGCAATGACAGAAAAATTACTTTTTTAATT CTAAAATTTGAACCTGGCTTCCTCTGTTATTGGAAAACTTGTTGTTGGCTTATTTGCAGCTGATTACTAATGTGTTTTCTTTTTGGCTTCTGGACTCCAC AGCATCAATTTGTTGCCGGTAAGTTTGCAATTTGTTTCTACTAAATATTTTGTCTTGGGGTTATTTTTACGAGTTTATTTTCGATGCATCTCTAGTGTAT GGTTTTCTACATTATTAACCAGTCACATGTTATCCATAAATGACTTTCACTGTAGCTATTATAAAAGTCAGATATTTTATAATGTGTTGATACATGATTA ATTGATTGTTTAAGAAATGTTTACACCACCAGTGCATTCTATTTAAATTCTATTTTTGTGCATAGAAATGTATATGTGTCTGTGTGTGTGAGAGAGAGAG AGGGGAGGAAATGCTGTATGTTATCGGGATTAATTGCATTGCGGTTTCTGCCCCGTGACTGATAATTTGTGCAAATGTCACAGTTACTGAGTGGAGTGGT GGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGAGCATGGGCAGCAATGATTTCTCTGGGAAAAGAAGGTCAAGTGT CCATATCCACTCTGTGCAGTGCCTTTGAAATAATAATTTACTTTCCCTTTCGTCTAACTTTTATATGCCTAATATATGGTGTATGGACAATCAATGGTGC ATTTTGTTCTACAGGTTACTTGAAAAATACAAAAGAAATTATGGAAGCCTCAAAACAAATAGAGAAAGGTGTAGAGGAGATTTCCGAGTTGTTTGTCGTT GGAAGGCCCGACATGACAATTGTGGCTTTTGGATCTGATGTTCTGGACATATTTGAGGTCAATGACATCATGTCATCCAAAGGATGGCATTTGAATGCAT TGCAGAGACCCAACAGCATCCATATCTGTGTGACACTGCAGCATGTTCCAGTTGTTGAAAACTTCCTCGGCGACTTGAAGGAATCGGTGAAAACTGTGAA AGAAAATCCTGGTCCAATAAAAGGAGGCCTAGCACCTATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCACAGTCCAGGAATTGCTGGTAGAGTAT ATGGATGGTACTTGCTAGTTGCCTATTGTCACATCTATCGCTTGTCGCTCCTTTTTTATCCGTCGAAAAATATTATCTCTCATTATTTAGTTAATGTTTA TTTAGATCAATTGACCAATCATAAAGTACGACACATATATTTGTCATATCCGTGTCATGTTTCGTGTGTGAGAACATAAATTATCTCCTTTTGTGTGATC CCATTATTAAATTATATTTGATTTTACTGTGCCTTGTTTCATATTGATTAAACAACTCAAATGAATGGAAAAGTTATTCTCATATCTCCGTGTGCTATTG TATTAGCCGACTTTATCTAGTGGAATTAAGACTTGTTTGTTGTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46333; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93816
| Blastp | Sphingosine-1-phosphate lyase from Arabidopsis with 71.21% of identity |
|---|---|
| Blastx | Sphingosine-1-phosphate lyase from Arabidopsis with 71.21% of identity |
| Eggnog | decarboxylase(COG0076) |
| Kegg | Link to kegg annotations (AT1G27980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453056.1) |
| Pfam | Pyridoxal-dependent decarboxylase conserved domain (PF00282.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |