| Id Trinity | FTRINITY_DN54861_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_91702 |
| Sequence | TTCTAGTAGCTTCTTTTGCCCCTTCCACACGCACTTTTTTATCTCTCTCGAAACCTCCATTCCATTACACTCTTCTATCAAACAACACAACACCGTTTCC CTCTCGCCCGTTCCCTTCGTGAATGGCAACAAGAAGATTATCAAATCTAACTAAATCCATTTTAGCTTCCTCGCACGCTTCTAGAACATTCCACAAACCT CTCTCTCGTTCACGCGCCGCCGCGCGTGTCTTCTCTTCATTCCCTCACCATGTCTCTGCTTCGAAGATTATCGACACCGATGTTGCCTCCGCTAAGTTCT TATCGCACTCTTTCACGCGCGGATTCCACGCTTCTAATCCCTCTTATCGATCAGCTAGTAGCGGTGCTCAGATTGCACAGACAGAGTTCACAGATATGGC ATGGGAGGGCATTCTTGGTGCTGTGGATTCTGCGCGAGTTAGTAAGCAACAAATCGTGGAATCTGAGCATTTAATGAAAGCCCTCCTAGAGCAAAAGGAT GGTTTGGCTAGAAGAATACTTACTAAGGCGGGATTGGACAACACGTCCGTGCTACAGGCTACGGACAACTTTATAGCTCAGCAACCAAAGGTGACAGGTG ACACCAGTGGTCCTGTGATTGGTTCACATTTTAGCTCCATCTTGGACAATTCTCGGAAGCACAAGAAAGAAATGGGCGATGATTATGTGTCTGTAGAGCA TCTTTTGCTGGCATTTCCTTCAGATAAGAGGTTTGGTCAACAGTTATTTAAGAATCTTCAGCTTAGCGAGAAGGCTTTGAAAGATGCCATCCAAGCTGTC CGTGGAAGTCAAAGAGTGACTGACCAAAGTACAAATTTACACTCTATGATTCTTTATTTCCATGAGGAAAACATGATTTGTTCTATCTTATTATAATATT GGTGAAAATTGTTAAACTGGTATATATGCAAGGTTCCTCTTGTTTCAATTGGCTTCATGATGTGACCCTAGAGCATGTTTGGCGTCCATTTACTTGATCC ATGACAATTTCTGGTTATGAAATAGAACCTGCATTCATGCTTGTATCATCAATTCCCGCTTCAAATATGTTTAAGCTGTTACACGAATATTTATATTCAT AAAGTTAAACTGGGACTTGTTTTTATAATGTGAATGATACTTTCTATTTGCTGTTGTTAGTTTGTTGGCACTTCTCAGAAACATCTTTTTTCTCCTTTGA AAATAATTGTCTATAGATCCTGAGGGGAAATATGAGGCATTGGAGAAGTATGGAAATGATCTAACTGAACTTGCTAGGCGTGGCAAGCTTGATCCTGTCA TTGGTCGAGATGATGAAATTCGGCGCTGTATCCAGATATTGTCAAGGAGAACAAAAAACAATCCAGTTATTATTGGTGAACCTGGTGTGGGGAAAACGGC AATTGCTGAAGGGTTAGCTCAACGTATAGTGCGCGGAGATGTTCCTGAACCATTGATGAACCGTAAGTTGATCTCCCTCGATATGGGTTCATTGCTAGCT GGTGCAAAGTTCCGTGGAGATTTCGAGGAAAGGTTGAAAGCTGTCCTAAAGGAAGTTACAGCATCAAATGGGCAAATAATTTTGTTTATTGATGAAATTC ACACTGTTGTAGGTGCAGGGGCTACAAGTGGTGCAATGGATGCTGGGAATTTGTTGAAGCCAATGCTTGGACGAGGTGAACTTCGATGTATAGGTGCAAC TACGCTGAATGAGTATAGAAAATATATTGAGAAGGATCCTGCACTTGAGCGTAGATTTCAACAAGTTTTTTGCTGTCAACCATCTGTTGAAGATACAATA TCCATTCTTCGTGGGTTGCGTGAGCGCTATGAGTTGCACCATGGAGTCAGAATATCAGATAGTGCACTTGTTTCAGCAGCAGTTCTTGCAGATCGATACA TCACGGAACGCTTCCTGCCTGACAAAGCCATTGATCTTGTCGATGAAGCTGCTGCAAAGCTGAAGATGGAGATTACCTCAAAGCCTACGGAATTGGATGA GATAGACAGATCGATCTTGAAATTGGAGATGGAAAAACTGTCTCTGAAAAATGACACTGATAAGGCATCTAAAGAAAGATTAAGCAAGCTTGAAAGTGAT TTGAATTTACTCAAGCAGAAGCAAAAGGAATTAGCAGGACAATGGGACAGCGAAAAGGCTTTAATGACTCGGATAAGATCAATCAAAGAAGAGGTAGTGT TTAGTCTATTGGACACCATTATCAAATACTTTACACTGTTTTATATGCTGGTAGAAAGTAGCTATCTGGTTATTATTTGTTACTGGGGTTGTGTGGACCT ATTTTTCTTGTCCGGCACGATCTCTATTTCTCAGTGTATGCGTCTGTGTAACATATTAACCTAATTATTCCCATCATTAAATTTCTCTAACACCTTTTTT GAGCATATGTAGATTGATAGAGTCAACCTAGAGATGGAAGCTGCTGAGCGTGATTATGACCTGAACCGTGCTGCTGAGCTTAAGTATGGAACTTTGATGT CCCTTCAGCGCCAATTGGAAGAAGCTGAAAAGAACCTAGCTGAATTCCGTAAATCCGGGCAATCTTTACTTCGAGAAGAGGTCACTGACCTTGATATTAC TGAGATTGTAAGCAAATGGACTGGTATACCATTATCAAATCTCCAACAAACAGAGAGAGAAAAGTTGGTCTTTCTGGAACAGGTTCTTCATAAGAGAGTG GTTGGTCAAGATATTGCTGTAAAATCAGTGGCTGATGCAATTCGCCGTTCAAGGGCTGGATTATCTGACCCAAATCGGCCAATTGCAAGCTTCATGTTCA TGGGTCCAACTGGTGTTGGCAAAACCGAGCTAGCCAAGGCTTTGGCTAGTTACTTGTTTAACACAGAAAATGCTCTTGTTAGAATTGATATGAGCGAGTA CATGGAGAAACATGCTGTTTCACGTTTAGTTGGGGCCCCTCCTGGTTATGTTGGTTATGAAGAAGGTGGTCAGCTAACTGAAGTTGTCCGGAGAAGACCT TACTCTGTCGTACTATTTGATGAGATAGAGAAGGCACATCATGATGTCTTCAACATCTTGTTACAGTTGCTGGATGATGGAAGGATTACTGATTCTCAAG GAAGGACTGTTAGCTTCACAAATTGTGTTGTGATTATGACTTCAAACATTGGCTCCCATCACATACTTGAAACCCTTCGTAGCACACAAGACGACAAAGT TGCAGTTTATGATCAGATGAAAAGACAAGTTGTCGAGTTGGCTCGGCAAACATTCCGCCCTGAGTTCATGAATCGTATTGATGAATATATTGTTTTCCAG CCTCTGGATTCCACACAGATCAGCAAAATAGTGGAGCTCCAGGTAATTGATGTGCTCATATTACAATTTTCCTTTTCAACTTGTCTTATTTCTCAGTTCC CTGGTATCAATGGAAAATAAATAATGGATTACATATTTAACAAAATAAGATGTTAATAGCTATTCTCTGGTTATTGAAGTTTTTTGGATTATGTTCTTTG ACTCATTGTAATTTATGAAGATGTATATGTTAATACATGTTTTGTAACCTGCTACACAGATGGAACGAGTGAAGAACAGGCTGAAGCAGAAGAAAATTGA TCTTCAGTACACCCAAGAAGCTGTTGAACTTCTTGGTGTATTGGGTTTTGATCCAAATTTTGGGGCAAGACCAGTTAAAAGAGTGATACAACAATTGGTC GAAAATGAAATTGCAATGGGAGTTCTAAGGGGAGATTTCAAAGAAGAGGATTCAATCATAGTTGATGCTGATGTGACTCCATCAGCCAAGGACCCTTCTC CCCTAAACAGACTGCATATTAAGAAGCTGGACAACCCTGTTGCTGATGCCATGGTTGCCAATGACTAATTTTCCCCATTGGGTTTCTCATGAAAGCTTCA CAATGGTGAGTTAAGATAACATAGTTCATACTTTTTTTGTATAGTGAATAGTTATGATAATTCCTTAGGGTATGAACTCAGTCCTTGTGTTTTATTTTAG GCCATGTTTTCCCACTTTGGGTAATAAGATTATTCTTTTAAAGGCTCTGTGAATTTGGAGTTCTCTGTTTTTTTTATATTCGGCTCTTACTCCCCTACTT TATCTTCATGATGGCATGCCCCAAAAATTCAGTGCTGATACAAAAAAATGTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46369; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91702
| Blastp | Chaperone protein ClpB4, mitochondrial from Arabidopsis with 89.14% of identity |
|---|---|
| Blastx | Chaperone protein ClpB2, chloroplastic from Oryza sativa with 64.94% of identity |
| Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
| Kegg | Link to kegg annotations (AT2G25140) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003522428.1) |
| Pfam | AAA domain (Cdc48 subfamily) (PF07724.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |