Id Trinity | FTRINITY_DN54861_c1_g1_i14 |
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Name Transcript | Ll_transcript_91704 |
Sequence | TTCTAGTAGCTTCTTTTGCCCCTTCCACACGCACTTTTTTATCTCTCTCGAAACCTCCATTCCATTACACTCTTCTATCAAACAACACAACACCGTTTCC CTCTCGCCCGTTCCCTTCGTGAATGGCAACAAGAAGATTATCAAATCTAACTAAATCCATTTTAGCTTCCTCGCACGCTTCTAGAACATTCCACAAACCT CTCTCTCGTTCACGCGCCGCCGCGCGTGTCTTCTCTTCATTCCCTCACCATGTCTCTGCTTCGAAGATTATCGACACCGATGTTGCCTCCGCTAAGTTCT TATCGCACTCTTTCACGCGCGGATTCCACGCTTCTAATCCCTCTTATCGATCAGCTAGTAGCGGTGCTCAGATTGCACAGACAGAGTTCACAGATATGGC ATGGGAGGGCATTCTTGGTGCTGTGGATTCTGCGCGAGTTAGTAAGCAACAAATCGTGGAATCTGAGCATTTAATGAAAGCCCTCCTAGAGCAAAAGGAT GGTTTGGCTAGAAGAATACTTACTAAGGCGGGATTGGACAACACGTCCGTGCTACAGGCTACGGACAACTTTATAGCTCAGCAACCAAAGGTGACAGGTG ACACCAGTGGTCCTGTGATTGGTTCACATTTTAGCTCCATCTTGGACAATTCTCGGAAGCACAAGAAAGAAATGGGCGATGATTATGTGTCTGTAGAGCA TCTTTTGCTGGCATTTCCTTCAGATAAGAGGTTTGGTCAACAGTTATTTAAGAATCTTCAGCTTAGCGAGAAGGCTTTGAAAGATGCCATCCAAGCTGTC CGTGGAAGTCAAAGAGTGACTGACCAAAGTACAAATTTACACTCTATGATTCTTATTTCCATGAGGAAAACATGATTTGTTCTATCTTATTATAATATTG GTGAAAATTGTTAAACTGGTATATATGCAAGGTTCCTCTTGTTTCAATTGGCTTCATGATGTGACCCTAGAGCATGTTTGGCGTCCATTTACTTGATCCA TGACAATTTCTGGTTATGAAATAGAACCTGCATTCATGCTTGTATCATCAATTCCCGCTTCAAATATGTTTAAGCTGTTACACGAATATTTATATTCATA AAGTTAAACTGGGACTTGTTTTTATAATGTGAATGATACTTTCTATTTGCTGTTGTTAGTTTGTTGGCACTTCTCAGAAACATCTTTTTTCTCCTTTGAA AATAATTGTCTATAGATCCTGAGGGGAAATATGAGGCATTGGAGAAGTATGGAAATGATCTAACTGAACTTGCTAGGCGTGGCAAGCTTGATCCTGTCAT TGGTCGAGATGATGAAATTCGGCGCTGTATCCAGATATTGTCAAGGAGAACAAAAAACAATCCAGTTATTATTGGTGAACCTGGTGTGGGGAAAACGGCA ATTGCTGAAGGGTTAGCTCAACGTATAGTGCGCGGAGATGTTCCTGAACCATTGATGAACCGTAAGTTGATCTCCCTCGATATGGGTTCATTGCTAGCTG GTGCAAAGTTCCGTGGAGATTTCGAGGAAAGGTTGAAAGCTGTCCTAAAGGAAGTTACAGCATCAAATGGGCAAATAATTTTGTTTATTGATGAAATTCA CACTGTTGTAGGTGCAGGGGCTACAAGTGGTGCAATGGATGCTGGGAATTTGTTGAAGCCAATGCTTGGACGAGGTGAACTTCGATGTATAGGTGCAACT ACGCTGAATGAGTATAGAAAATATATTGAGAAGGATCCTGCACTTGAGCGTAGATTTCAACAAGTTTTTTGCTGTCAACCATCTGTTGAAGATACAATAT CCATTCTTCGTGGGTTGCGTGAGCGCTATGAGTTGCACCATGGAGTCAGAATATCAGATAGTGCACTTGTTTCAGCAGCAGTTCTTGCAGATCGATACAT CACGGAACGCTTCCTGCCTGACAAAGCCATTGATCTTGTCGATGAAGCTGCTGCAAAGCTGAAGATGGAGATTACCTCAAAGCCTACGGAATTGGATGAG ATAGACAGATCGATCTTGAAATTGGAGATGGAAAAACTGTCTCTGAAAAATGACACTGATAAGGCATCTAAAGAAAGATTAAGCAAGCTTGAAAGTGATT TGAATTTACTCAAGCAGAAGCAAAAGGAATTAGCAGGACAATGGGACAGCGAAAAGGCTTTAATGACTCGGATAAGATCAATCAAAGAAGAGATTGATAG AGTCAACCTAGAGATGGAAGCTGCTGAGCGTGATTATGACCTGAACCGTGCTGCTGAGCTTAAGTATGGAACTTTGATGTCCCTTCAGCGCCAATTGGAA GAAGCTGAAAAGAACCTAGCTGAATTCCGTAAATCCGGGCAATCTTTACTTCGAGAAGAGGTCACTGACCTTGATATTACTGAGATTGTAAGCAAATGGA CTGGTATACCATTATCAAATCTCCAACAAACAGAGAGAGAAAAGTTGGTCTTTCTGGAACAGGTTCTTCATAAGAGAGTGGTTGGTCAAGATATTGCTGT AAAATCAGTGGCTGATGCAATTCGCCGTTCAAGGGCTGGATTATCTGACCCAAATCGGCCAATTGCAAGCTTCATGTTCATGGGTCCAACTGGTGTTGGC AAAACCGAGCTAGCCAAGGCTTTGGCTAGTTACTTGTTTAACACAGAAAATGCTCTTGTTAGAATTGATATGAGCGAGTACATGGAGAAACATGCTGTTT CACGTTTAGTTGGGGCCCCTCCTGGTTATGTTGGTTATGAAGAAGGTGGTCAGCTAACTGAAGTTGTCCGGAGAAGACCTTACTCTGTCGTACTATTTGA TGAGATAGAGAAGGCACATCATGATGTCTTCAACATCTTGTTACAGTTGCTGGATGATGGAAGGATTACTGATTCTCAAGGAAGGACTGTTAGCTTCACA AATTGTGTTGTGATTATGACTTCAAACATTGGCTCCCATCACATACTTGAAACCCTTCGTAGCACACAAGACGACAAAGTTGCAGTTTATGATCAGATGA AAAGACAAGTTGTCGAGTTGGCTCGGCAAACATTCCGCCCTGAGTTCATGAATCGTATTGATGAATATATTGTTTTCCAGCCTCTGGATTCCACACAGAT CAGCAAAATAGTGGAGCTCCAGATGGAACGAGTGAAGAACAGGCTGAAGCAGAAGAAAATTGATCTTCAGTACACCCAAGAAGCTGTTGAACTTCTTGGT GTATTGGGTTTTGATCCAAATTTTGGGGCAAGACCAGTTAAAAGAGTGATACAACAATTGGTCGAAAATGAAATTGCAATGGGAGTTCTAAGGGGAGATT TCAAAGAAGAGGATTCAATCATAGTTGATGCTGATGTGACTCCATCAGCCAAGGACCCTTCTCCCCTAAACAGACTGCATATTAAGAAGCTGGACAACCC TGTTGCTGATGCCATGGTTGCCAATGACTAATTTTCCCCATTGGGTTTCTCATGAAAGCTTCACAATGGTGAGTTAAGATAACATAGTTCATACTTTTTT TGTATAGTGAATAGTTATGATAATTCCTTAGGGTATGAACTCAGTCCTTGTGTTTTATTTTAGGCCATGTTTTCCCACTTTGGGTAATAAGATTATTCTT TTAAAGGCTCTGTGAATTTGGAGTTCTCTGTTTTTTTTATATTCGGCTCTTACTCCCCTACTTTATCTTCATGATGGCATGCCCCAAAAATTCAGTGCTG ATACAAAAAAATGTGAC BLAST |
Tissue | flowers |
Gene name | LI_gene_46369; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91704
Blastp | Chaperone protein ClpB4, mitochondrial from Arabidopsis with 85.39% of identity |
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Blastx | Chaperone protein ClpB4, mitochondrial from Arabidopsis with 86.3% of identity |
Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
Kegg | Link to kegg annotations (AT2G25140) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437789.1) |
Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |