| Id Trinity | FTRINITY_DN54861_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_91684 |
| Sequence | TTCTAGTAGCTTCTTTTGCCCCTTCCACACGCACTTTTTTATCTCTCTCGAAACCTCCATTCCATTACACTCTTCTATCAAACAACACAACACCGTTTCC CTCTCGCCCGTTCCCTTCGTGAATGGCAACAAGAAGATTATCAAATCTAACTAAATCCATTTTAGCTTCCTCGCACGCTTCTAGAACATTCCACAAACCT CTCTCTCGTTCACGCGCCGCCGCGCGTGTCTTCTCTTCATTCCCTCACCATGTCTCTGCTTCGAAGATTATCGACACCGATGTTGCCTCCGCTAAGTTCT TATCGCACTCTTTCACGCGCGGATTCCACGCTTCTAATCCCTCTTATCGATCAGCTAGTAGCGGTGCTCAGATTGCACAGACAGAGTTCACAGATATGGC ATGGGAGGGCATTCTTGGTGCTGTGGATTCTGCGCGAGTTAGTAAGCAACAAATCGTGGAATCTGAGCATTTAATGAAAGCCCTCCTAGAGCAAAAGGAT GGTTTGGCTAGAAGAATACTTACTAAGGCGGGATTGGACAACACGTCCGTGCTACAGGCTACGGACAACTTTATAGCTCAGCAACCAAAGGTGACAGGTG ACACCAGTGGTCCTGTGATTGGTTCACATTTTAGCTCCATCTTGGACAATTCTCGGAAGCACAAGAAAGAAATGGGCGATGATTATGTGTCTGTAGAGCA TCTTTTGCTGGCATTTCCTTCAGATAAGAGGTTTGGTCAACAGTTATTTAAGAATCTTCAGCTTAGCGAGAAGGCTTTGAAAGATGCCATCCAAGCTGTC CGTGGAAGTCAAAGAGTGACTGACCAAAATCCTGAGGGGAAATATGAGGCATTGGAGAAGTATGGAAATGATCTAACTGAACTTGCTAGGCGTGGCAAGC TTGATCCTGTCATTGGTCGAGATGATGAAATTCGGCGCTGTATCCAGATATTGTCAAGGAGAACAAAAAACAATCCAGTTATTATTGGTGAACCTGGTGT GGGGAAAACGGCAATTGCTGAAGGGTTAGCTCAACGTATAGTGCGCGGAGATGTTCCTGAACCATTGATGAACCGTAAGTTGATCTCCCTCGATATGGGT TCATTGCTAGCTGGTGCAAAGTTCCGTGGAGATTTCGAGGAAAGGTTGAAAGCTGTCCTAAAGGAAGTTACAGCATCAAATGGGCAAATAATTTTGTTTA TTGATGAAATTCACACTGTTGTAGGTGCAGGGGCTACAAGTGGTGCAATGGATGCTGGGAATTTGTTGAAGCCAATGCTTGGACGAGGTGAACTTCGATG TATAGGTGCAACTACGCTGAATGAGTATAGAAAATATATTGAGAAGGATCCTGCACTTGAGCGTAGATTTCAACAAGTTTTTTGCTGTCAACCATCTGTT GAAGATACAATATCCATTCTTCGTGGGTTGCGTGAGCGCTATGAGTTGCACCATGGAGTCAGAATATCAGATAGTGCACTTGTTTCAGCAGCAGTTCTTG CAGATCGATACATCACGGAACGCTTCCTGCCTGACAAAGCCATTGATCTTGTCGATGAAGCTGCTGCAAAGCTGAAGATGGAGATTACCTCAAAGCCTAC GGAATTGGATGAGATAGACAGATCGATCTTGAAATTGGAGATGGAAAAACTGTCTCTGAAAAATGACACTGATAAGGCATCTAAAGAAAGATTAAGCAAG CTTGAAAGTGATTTGAATTTACTCAAGCAGAAGCAAAAGGAATTAGCAGGACAATGGGACAGCGAAAAGGCTTTAATGACTCGGATAAGATCAATCAAAG AAGAGGTAGTGTTTAGTCTATTGGACACCATTATCAAATACTTTACACTGTTTTATATGCTGGTAGAAAGTAGCTATCTGGTTATTATTTGTTACTGGGG TTGTGTGGACCTATTTTTCTTGTCCGGCACGATCTCTATTTCTCAGTGTATGCGTCTGTGTAACATATTAACCTAATTATTCCCATCATTAAATTTCTCT AACACCTTTTTTGAGCATATGTAGATTGATAGAGTCAACCTAGAGATGGAAGCTGCTGAGCGTGATTATGACCTGAACCGTGCTGCTGAGCTTAAGTATG GAACTTTGATGTCCCTTCAGCGCCAATTGGAAGAAGCTGAAAAGAACCTAGCTGAATTCCGTAAATCCGGGCAATCTTTACTTCGAGAAGAGGTCACTGA CCTTGATATTACTGAGATTGTAAGCAAATGGACTGGTATACCATTATCAAATCTCCAACAAACAGAGAGAGAAAAGTTGGTCTTTCTGGAACAGGTTCTT CATAAGAGAGTGGTTGGTCAAGATATTGCTGTAAAATCAGTGGCTGATGCAATTCGCCGTTCAAGGGCTGGATTATCTGACCCAAATCGGCCAATTGCAA GCTTCATGTTCATGGGTCCAACTGGTGTTGGCAAAACCGAGCTAGCCAAGGCTTTGGCTAGTTACTTGTTTAACACAGAAAATGCTCTTGTTAGAATTGA TATGAGCGAGTACATGGAGAAACATGCTGTTTCACGTTTAGTTGGGGCCCCTCCTGGTTATGTTGGTTATGAAGAAGGTGGTCAGCTAACTGAAGTTGTC CGGAGAAGACCTTACTCTGTCGTACTATTTGATGAGATAGAGAAGGCACATCATGATGTCTTCAACATCTTGTTACAGTTGCTGGATGATGGAAGGATTA CTGATTCTCAAGGAAGGACTGTTAGCTTCACAAATTGTGTTGTGATTATGACTTCAAACATTGGCTCCCATCACATACTTGAAACCCTTCGTAGCACACA AGACGACAAAGTTGCAGTTTATGATCAGATGAAAAGACAAGTTGTCGAGTTGGCTCGGCAAACATTCCGCCCTGAGTTCATGAATCGTATTGATGAATAT ATTGTTTTCCAGCCTCTGGATTCCACACAGATCAGCAAAATAGTGGAGCTCCAGGTAATTGATGTGCTCATATTACAATTTTCCTTTTCAACTTGTCTTA TTTCTCAGTTCCCTGGTATCAATGGAAAATAAATAATGGATTACATATTTAACAAAATAAGATGTTAATAGCTATTCTCTGGTTATTGAAGTTTTTTGGA TTATGTTCTTTGACTCATTGTAATTTATGAAGATGTATATGTTAATACATGTTTTGTAACCTGCTACACAGATGGAACGAGTGAAGAACAGGCTGAAGCA GAAGAAAATTGATCTTCAGTACACCCAAGAAGCTGTTGAACTTCTTGGTGTATTGGGTTTTGATCCAAATTTTGGGGCAAGACCAGTTAAAAGAGTGATA CAACAATTGGTCGAAAATGAAATTGCAATGGGAGTTCTAAGGGGAGATTTCAAAGAAGAGGATTCAATCATAGTTGATGCTGATGTGACTCCATCAGCCA AGGACCCTTCTCCCCTAAACAGACTGCATATTAAGAAGCTGGACAACCCTGTTGCTGATGCCATGGTTGCCAATGACTAATTTTCCCCATTGGGTTTCTC ATGAAAGCTTCACAATGGTGAGTTAAGATAACATAGTTCATACTTTTTTTGTATAGTGAATAGTTATGATAATTCCTTAGGGTATGAACTCAGTCCTTGT GTTTTATTTTAGGCCATGTTTTCCCACTTTGGGTAATAAGATTATTCTTTTAAAGGCTCTGTGAATTTGGAGTTCTCTGTTTTTTTTATATTCGGCTCTT ACTCCCCTACTTTATCTTCATGATGGCATGCCCCAAAAATTCAGTGCTGATACAAAAAAATGTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46369; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91684
| Blastp | Chaperone protein ClpB3, mitochondrial from Oryza sativa with 82.39% of identity |
|---|---|
| Blastx | Chaperone protein ClpB2, chloroplastic from Oryza sativa with 62.86% of identity |
| Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
| Kegg | Link to kegg annotations (4328515) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003522428.1) |
| Pfam | Clp amino terminal domain, pathogenicity island component (PF02861.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |