Id Trinity | FTRINITY_DN54861_c1_g2_i10 |
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Name Transcript | Ll_transcript_91703 |
Sequence | ATTTAAACCTTTATTCATATCCCAAAAAACATTGAGTTCCTCACATTACTCCTATCTCAACTAAGTGTGTGACCCTGCTGAACCTAGCGCGCATTGCGCA CCCCGCGTATCCAACTCTTCTTCCTTCTTCACTCACTCTTCCATGGCCTCTACGACGTCGTTTTCAGGTCTCACTTTTCCACTTTCCTCTCACAGAAACG ATGCTCGATTCTCTCACTTTCAATCCTTTCTTCATTTTCCTCACAAACCCACTTCCCTAAAGACGCTAAATACGGTGCCGTTTAATAAAAGAGAACCTTT TTCAATTGGGTTTCACGGAATTCGAAGAATTCCCAAAAAATTCTCTCTTCTCTGCGCAACTGCTTCAAATGGAAAGATCACACAGCAGGAGTTCACGGAA ATGGCATGGCAAGCAATTGTCTCGTCGCCAGAAGTGGCAAAGGAGAACAAGCATCAGATTGTGGAGACAGAGCACTTGATGAAAGCTTTATTAGAGCAAA AAAATGGGCTTGCTCGCCGGACATTTTCTAAGGTTGGGGTAGATAACACTCGGCTTCTAGAGGCTACTGATAAGCACATTCAGCGGCAACCAAAGGTCCT AGGGGATTCAAGTGGTTCTATGTTGGGGCGTGATTTGGAGGCATTGATTCAGAGAGCCAGGGACTTCAAGAAAGAATATGGGGACTCATTTGTGTCAGTT GAACACTTGCTTCTTGGTTTTGCCGAAGATAAACGATTTGGAAAGATATTGTTTAGGGATTTTCAAATAACTCTGCAAGCTCTAAAATCTGCCATAGAGT CCATAAGGGGACGCCAGTCAGTTATTGACCAAGGTCAAATACTATTTCTCAGCTTTTTATATTGATAATATCATGTAATATGTAATATATAACCGTCTGT GTTGCCTTTTTTTATTTCCCCCTTTATTTCTGGGGTGGGGAAGCTAGGGTTGTTAGTTCTCCCCTATTGAAAACATAAGTATCTTTGGTGTTGGGATGGT ATTGCGAAGTAGTAGATTCAGGTTGTGATGACTTTTCTATGGGGTGTTAAGATCTTTGCATTATATTTTTCGTTCTAAACATCTAGCAATGCTTAAGCTT CAATTTAAATTTGTTATAGATCCCGAAGGGAAGTATGAAGCCTTGGAAAAATATGGGAAAGATTTGACAGCAATGGCTAAAGCAGGAAAACTTGACCCAG TCATAGGAAGAGATGATGAAATACGCAGGTGCATTCAGATTCTGTCAAGGAGAACTAAGAACAACCCTGTGCTAATCGGTGAGCCTGGTGTTGGAAAAAC GGCAATTTCTGAAGGACTTGCTCAGAGAATTGTTCAAGGAGATGTTCCTCAAGCTTTGATGAATCGGAAGCTTATATCCCTTGATATGGGTTCACTTATT GCTGGAGCGAAGTATCGGGGAGAATTTGAGGATCGGCTGAAAGCTGTTCTTAAAGAAGTAACAGAATCTGATGGTCAAACTATCCTTTTCATTGATGAGA TCCATACAGTTGTTGGGGCAGGTGCTACTAATGGTGCTATGGATGCCGGTAATCTCTTAAAGCCTATGCTTGGTCGAGGGGAGCTGCGATGTATTGGTGC AACCACACTAGATGAGTATCGGAAGTATATTGAGAAGGATCCAGCACTTGAACGTCGTTTCCAGCAAGTATATGTTGACCAGCCTACAGTTGAAGATACC ATTTCAATACTAAGGGGACTGAGGGAAAGATATGAGCTGCATCATGGAGTGCGCATTTCTGACAGTGCCCTTGTGGAAGCTTCAATTCTCTCTGATAGAT ACATAAGTGGAAGATTTTTGCCTGACAAAGCTATCGATCTGGTTGATGAAGCAGCTGCGAAACTGAAGATGGAAATTACTTCTAAACCTACTGCGCTTGA TGAAATCAACAGATCAGTTTTGAAACTTGAGATGGAGAGACTCTCTCTCATGAACGATACTGACAAGGCTTCTAAAGACAGGTTAAATCGTCTTGAAACA GAGCTCTCTCTTTTAAAAAAGAAACAGGATGAACTAACTCAGCAATGGGAGCATGAAAAGTCTGTAGTGACCCGTTTTCAATCGATCAAAGAAGAGATAG ACAGGGTCAATCTTGAGATTATACAGGCTGAGCGGGAGTATGATCTTAATCGTGCTGCTGAATTAAAATATGGCAGTCTAAACTCCTTGCAAAGAAAACT TGAAAGTGCAGAGAAAGAGTTACAAGAATATATGAACTCCGGTAAATCTATGCTGAGAGAGGAAGTTACTGGAAGTGATATTGCTGAGATTGTAAGCAAG TGGACAGGTATCCCCATCTCGAAACTTCAAGAATCGGAGAGAGAGAAGTTGTTGCATTTGGAGGAAGAGCTCCATAAGCGTGTAGTAGGTCAAGATCCTG CTGTTAAGGCAGTAGCTGAGGCTATCCAGCGTTCAAGAGCGGGTCTTTCAGATCCACATCGCCCAATTGCTAGCTTCATGTTTATGGGACCCACAGGAGT AGGAAAGACAGAGCTAGCTAAGGCCCTTGCTTCCTACTTGTTCAATACCGAAGAAGCTCTTGTGAGAATTGATATGAGTGAGTACATGGAAAAGCACACG GTTTCAAGATTGATTGGGGCTCCACCTGGATATGTTGGGTACGAAGAGGGAGGCCAACTAACCGAGACTGTTCGCCGCAGACCATATGCTGTTATTTTGT TTGATGAGATTGAGAAAGCACACTCGGATGTTTTCAATGTATTCCTTCAAGTTCTCGATGATGGAAGAGTGACTGATTCACAGGGACGCACAGTAAGTTT TACCAACACTGTTATCATCATGACCTCAAATGTTGGATCACAGTACATTCTTAACTCAGATGATGAGACTGTTCCCAAAGAGTTAGCTTATGAAAATATA AAGCAGCGGGTAATGGATGCTGCAAGATCCATCTTTCGGCCTGAGTTCATGAACAGAGTTGATGAGTACATTGTTTTCCAGCCTCTAGACCGTGACCAAA TAAGTAGCATTGTCAGGTTGCAGTTGGAGCGCGTACAGACTAGAATCGCGTATCGCAAGATGAAAATCGAAGTAACAGAAGCTGCAACCAAACTTCTTGC TAGTCTGGGGTATGATCCCAACTATGGGGCTAGGCCAGTGAAGAGAGTGATTCAGCAAAATGTAGAGAATGAACTTGCCAAGGGTATTCTTAGAGGAGAC TTTAAGGATGAAGACACGATTTTAATCGACACCGAAGTCACAGCATTCTCCAATGGTCAACTTCCACAGCAGAAGCTATCTTTTAGGAGACTTGATACTG ACTCAGAATCTGCCACCAGAGACAGTGAGAAAAGCTTCAAACAAATTTTGTGAATGCCTTTTACTGCTTTTTTCTTCTGTAGTCCTGTGCACAGCTTGCA TGTAATTTATTTATAGTTCTTTGATACTTTTTATAAGTTAATAAAAAGCTATGCAGTATGAGACTATGAGGTACATTAATCTTAATTTGATGGATACAGC ATATGATGTAAATCTTAAAGCCCTCTAAAGTCTAAACTTGATGTTTTGTTCAAACAGTCAAAGTTGATTTGACTAGCAAGGGTTCAATAAAAAGGAACAA GAAAGAAAAATATTTGTCAACTGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_46370; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91703
Blastp | Chaperone protein ClpB3, chloroplastic from Arabidopsis with 88.89% of identity |
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Blastx | Chaperone protein ClpB3, chloroplastic from Arabidopsis with 88.14% of identity |
Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
Kegg | Link to kegg annotations (AT5G15450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427992.1) |
Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |