Ll_transcript_91698

• Id Trinity: FTRINITY_DN54861_c1_g2_i7
• Name Transcript: Ll_transcript_91698
• Sequence: CGTGCCCTTCCAAAAAACAATTAGAAGGTACTCGAAGTTTTTGGAACCTGCGTCATTACTCTATATTCTCACTCCTTCTTTTTCTTCTTCTCTTAATTCC TCACACAAATTCACATTTCTTCATTTCCCATTCTCGTCTTAGTTTCCACTCTCTGATCTCACTCTTTCATTTTCATCATCTTCATGGCTTCTACGACGTC GTTTTCATCTCTTTTCTTTTCTCACTCACTTCCTATTTCTAGTAACCGAAACCATCATCACAATCATATTTCCCTCGCTTTTTCCGCTAAACCCAGTTTT CCAAATACTCTCAAATCGTTACCGTTGAAGAAAAGATGCGTTTTTTCTAATGGGCTTCAGAGAAATTTAAGAAATTCTACTCGTTTCTCTGTTCGTTGTG AAGCATCCTCTAGTGGAAGGATTACACAGCAAGAGTTCACAGAAATGGCATGGCAGGCAATAGTTTCGTCACCAGAAGTGGCGAAGGAGAATAAGCATCA GATTGTGGAGACAGAGCACTTGATGAAGGCTTTGTTGGAGCAGAAGAACGGACTTGCTCGCAGGATATTTTCCAAGGTCGGGGTTGATAACACTCGGCTT CTAGAAGCTACGGATAAGTACATTCAGAGACAACCCAAGGTGCTAGGAGAATCAGCTGGTTCAATGTTGGGGCGTGATTTGGAGGCATTGATTCAGAGAG CCAGGGACTACAAGAAGGAATATGAGGATTCATTTGTTTCAGTTGAGCACTTGGTTCTTGGATTTGCCCAAGATCAACGATTTGGGAAGCAGTTCTTTAA AGATTTTCAAATATCTCAGCAGGCTCTTAAATCTGCAATAGAGTCTGTTAGAGGACGCCAGTCAGTTATTGACCAGGATCCCGAAGGGAAGTATGAAGCC TTGGAAAAATATGGGAAAGATTTGACAGCAATGGCTAAAGCAGGAAAACTTGACCCAGTCATAGGAAGAGATGATGAAATACGTAGGTGCATCCAGATTC TGTCCAGAAGGACAAAGAACAATCCTGTCCTAATCGGTGAGCCTGGTGTTGGAAAGACTGCAATTTCTGAAGGGTAAATATTACTACTTAGGCCTTTCTT CTAGCTTGTGACCTATGATTGGATTGTTGGAACACTTTCACTGTTAAAATCGTTATGTATTAATTTTAACGAGCTTCTACGGGTATTGGTGGAACTTTAA CCTCAATGTGTAACCTACTTCATAAACACTAAAACTGGCACCTGTGACTCTGGTTTATAAATAATACATCTTTTATTTAAATATATAATGGTTACATTTA TTGGAAAAAAGGGAAAGGAAAGTTGAATTTTTTATATGAAATTAGTCTTTTTAATACCAACTTCTTGAAAATAGGAATGGGGTTTAAGTGGTTTGTCTGA GTGAATAATATAAAACGATAAATTTATATCTTTTCTGATTATCCTGACATTACATCTTATCCCCATCTTTTCAATTATACTAAATAAAACTATGGGCTGT TAGGAAAACAGTTAGATACCTTATGAGGTAAATCCCTTTCTATAGTCGTAAATATTTGAATGGCAGAAGTATTATGATCAGTTGTATGTTCAATACTGTT GGATATTCGAAGTGCGAATGAAGAAGTCATGCAAAAGTGGATAAGTTAAATAGCAATTAAGTCAAACCCACTTATATGCTTCTTTCATTTAGCTCATGGA GGAATGTTATAGCCCATGGATGAAGATCTCCCAACAAATATGAAATTTGTGTCTTGCTAAAGGTTCAATTTTTTCTCATAATTTCCTCCTAAATTGAGGG GAAAACTAATTTATTCTCGCTTTCACTTTATATGAATGATATTGTTATTAGTCTTTAATTTTATCTCTGTTCTGTGCATTTACCCAACTTTTCCTTTGAA ATAGACTTGCTCAGAGAATTGTGCAAGGAGATGTTCCTCAAGCTTTGATGAACCGCAGGCTTATATCGCTTGATATGGGTTCACTTATTGCTGGAGCAAA GTACCGGGGAGAATTTGAGGATAGGCTGAAAGCTGTTCTCAAAGAAGTAACTGAATCTGATGGTCAGACCATCCTTTTTATTGATGAGATTCATACAGTT GTTGGTGCAGGTGCTACAAATGGTGCTATGGATGCTGGTAATCTCTTAAAGCCTATGCTTGGTCGGGGGGAGCTGCGATGCATTGGCGCAACAACACTAG ATGAGTATCGCAAGTATATCGAAAAGGACCCTGCACTAGAGCGTCGTTTCCAACAAGTTTATGTTGACCAACCTACAGTTGAAGATACCATTTCAATACT AAGGGGACTACGGGAAAGGTATGAGCTGCATCATGGTGTCCGAATTTCAGACAGTGCACTTGTGGAAGCTGCAATTCTCTCAGATCGATATATCAGTGGG AGATTTCTGCCTGACAAAGCTATTGATCTGGTTGATGAAGCAGCTGCTAAACTGAAAATGGAAATTACTTCCAAACCTACTGTACTTGATGAGATAAATC GGTCGGTCTTGAAACTAGAGATGGAGAGACTCTCTCTCACGAATGATACAGATAAGGCTTCTAAAGATAGGTTAAGTCGTCTTGACGCAGAGCTATCTCT TTTAAAAGAAAAACAGGTTGAGCTGACTGAGCAATGGGAGCATGAAAAGTCTGTCATGACTCATATTCAATCAATTAAAGAAGAGATAGACAGGGTGAAT CTTGAGATCCAACAGGCTGAGAGGGAGTATGATCTTAACCGTGCTGCGGAATTGAAGTATGGCAGTCTAAACTCGTTGCAGCGACAACTTGAAAGTGCAG AGAAGGAATTAGATGAATACATGAACTCTGGAAAGTCTATGCTGAGAGAAGAAGTTACCGAGAATGATATTGCTGAAATTGTAAGCAAATGGACGGGTAT TCCAGTTTCGAAACTTCAACAGTCCGAGAGGGAGAAACTATTGTATTTAGAGCAAGTGCTCCATAAGCGTGTTGTAGGTCAAGACCCGGCTGTTAAGGCT GTAGCTGAAGCTATCCAACGTTCAAGAGCAGGTCTTTCAGATCCTCATCGTCCCATTGCTAGCTTCATGTTTATGGGACCTACAGGTGTAGGAAAGACTG AGCTTGCTAAGGCCCTTGCTTCCTACTTGTTCAATACCGAAGAAGCACTTGTACGAATTGATATGAGCGAGTACATGGAAAAACACGCTGTTTCAAGATT GATTGGGGCACCGCCTGGATATGTTGGGTATGAAGAGGGAGGGCAACTTACCGAGACAGTTCGTCGAAGACCATATGCTGTTATTTTGTTTGATGAGATT GAGAAGGCACACTCAGATGTATTCAATGTATTTCTTCAAATTTTGGATGATGGAAGAGTAACTGACTCACAAGGTCGCACAGTGAGTTTTACTAACACTG TTATCATTATGACCTCAAATGTTGGATCACAGTATATTCTCAACACTGATGATGACACTGTGCCGAGAGAGCTGGCTTACGAAACCATAAAACAACGGGT GATGGATGCCGCAAGATCCATCTTTCGCCCTGAATTCATGAATAGAGTTGATGAGTATATTGTCTTCCAACCTCTAGACCGTGACCAAATAAGTAACATT GTCAGATTACAGTTGGAGCGGGTACAAAAACGAATCGCGGATCTCAAGATGAGAATCCAAGTGACAGATGCTGCTATCCAACTTCTTGGAAGTTTGGGGT ATGACCCTAACTATGGTGCTAGGCCAGTCAAGAGAGTGATTCAGCAAAATGTGGAGAATGAACTTGCCAAGGGTATTTTAAGAGGTGAATTTAAGGATGA AGATGCAATATTAATAGATACAGAACTCACACCATTTGGCAATGGTCAACTTCCACAACAAAAGCTTGTTTTTAAGAAACTTGAAGCTGATTCAAAATCT ACAACTCAAGATAGCTTGGAAAGAGCACAGGCTCCTTGAATGCATTTTTCAGCATCTTATTTCTCCACGTAGAGCTAAGTTTCACACAGATACTAGTGTA CATGATTTTCTTATATAGATTGAACAATGATCCTAGCATATTTAGAATCCAATATATAATATATTTATTGATCAATACAGTCTTAAGACTTGACAAAGGG TTGAAATTTTTTGCATGGTCACTTTTAGTCTAACTAGCAATAGAAAAATATAAGTCTGAAATTTTCAAATGTTCAACAAGTTTTCATAATTTCAAAAATC CAAGTTTTCTTTGTTGATAGCATGCATCTGAATTATGTGCTTTTTTACC
• Tissue: flowers
• Gene name: LI_gene_46370;
• Additional information: details;

Expression of Ll_transcript_91698

FPKM

• FPAB: 0.5
• FPNAB: 0.5
• LF1: 0
• LF2: 0.3
• LF3: 0.2
• LF4: 0.4
• UF1: 0.2
• UF2: 0.2
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_91698

• Blastp: Chaperone protein ClpB3, chloroplastic from Arabidopsis with 88.26% of identity
• Blastx: Chaperone protein ClpB3, chloroplastic from Arabidopsis with 88.51% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G15450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461454.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;