Id Trinity | FTRINITY_DN54877_c5_g1_i6 |
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Name Transcript | Ll_transcript_92354 |
Sequence | ATCTTCAAATGAACTTTCTATGTCCCTATCCAGTGGTGTCGGCCAAAAATTGGTAGAATGAAACATAAGGTAAATGTAAGTCTAATATTCATACTCAAAC TATTGGAGGTAGAGGTATTATCCGAGATCATAATGGACATTAACTGGTAGGTTTCTCTACAATTTTTGTAATTGGGTCTCCACCTGGCAGAACTACTAAC TACAAAACATGATCTACAATGATATTAATTTGCAGAATATATCTCAAGTTATTCAGCTTTGATTAAAATAAGTTAGGATATTGAAATCCAACATATCTTG TATGAGAGAAATGGATAAATGGTATCCATTATTATTAGTATGAGGAAGCAGAGGCAAGTGCAAGTGGATGAGCGTGACGGTGTCCTTGACAGCGTTTAGA CAGAACATCGTCGCGAGAAAGAAAGCGACCACAAACGGAAACACTTTATGTCGTACACGTGTCCCTCCTCAGCGGACTCCAAACGTACGATTTCTAATCC TACAAACCCCGTGTGCCCAAAATATAAAAACCATTTGGATTCCGTCCAATACTAATAAAAACAACGCAACTTCCACTCTCTTCCGTTTCGTGTCACCTTT GGCGGTTTTTAACCTTTTTCGGTTTTCATCATTCATTCCTTGAATTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAATTCAACAATACTTTGAGGTTAGAT CTTCGAACTAGTTTATGTTCTTAATTCTATTGTTTCTGATGTTAGATTAGATCAATTATACTTTGAGATTGGTTTTGCTTGATGAATGAATGAGGTTGAG GTTTGTCGTAATTTCATTTCTTCATTTTTTGTCACTCCGCACACGCTTTCTCAATCAACTCGTTTTTACTGTGAAAAATTACGGAGAAAATGGGAGCTTA ACTGAATTGGATTATGCTGTTTTCACTTGGTTTACTTCAAATCCGAATTGTGCTTGTAATTCTTAGCTATGTATGTTGTTTTGCTTTACGAATTGTTCTT GACCTATATATTTTTTAAAATATTTTAATTATCAATTATTGATATCAGTGACAGAAGTAGTTGTGTTAATGTAGGTCACTGTGACTGATTTTGTTGTTTT AAGATTAAGAAAAGTATTCGATGGAATTCGGAATGGACTAATTGATGATGGTGTGTAGTTTTTGCAGTGGCATGAGTGGTAGTTGTAGATTAGCTAGCAT AGTATGGTTTTTCCAATGAGATTTTTTCTTGGTGGAATTCTCCGCAATAGGACAGTTAATGTGGCTTCTCTGTGCTATTTGGCCTTTTGGTTTCTCCTAA GGATTTACGAAAGGGCTTACTTTTTCGTGTTGTGTTTATGGTTTTCTAGTCCGAGAGGTGTTTGGGAATTATTTGAGAAGTAAAATTGACAAGCTTTTGG ACTGGTTCTAACATATGGTCGTTCTGGTGATATGCAGTCTTAATCCGAAGAAATATGTTTGTGTTATCACTTTCACACTAGATTTTCTGCAAGAGTACAT ATAATTTGGAATTAATAAGAAAGAATTATTTTGTTCAAGATAACTACCGAGTCTGAACCTGTGTAATTACTGTGTTCGAGATTCAGACTAGATTTCTTGG TACATTGAACTTAGTTTTCATGTAATTTAACTTTACAGAAACAGTTGTACTGTTGTCGTACCACATGTTCTTTCGAAGAAGATCTTGCATTTACAATAAT GTACACATATGAATGCTGTACACATGCTCCTGTTCTTATGTTCACGAACATGCATTTATCATCTCTGTGTGGATATAAACAATGAAAAAAGTAAGCTGAT GCACATTGAAGTTGTAGGATAATAATCAAGAGAACTTGATTTGGATCGGAAAGAATATTTGCAGAGGCATTCCAATATGAAATGCAAACGGGTTCAGGTG GGTGAATCATTTGTACCTGTTCTTAAAGATGAAGAAATGGAAGTTGAGCATTCACTTGAAGAACATAGAAATGGTCATATTTCAATGGATGGCAGTTTGG ATTCTCATACAACTTTGAATGGCATGGATGATTTGGGACTGGAGGTTCTTGATGGAATCCTGGATGATGTTGAAATCAATGATCTTGATGGAATCGATGC TTTCTCTGGTGCATGTGACGAGTATTTTTTGGATTGTGACTTTGTCAACAATCCTGAGGTACTAGGCTATGGTCTTTCTAAAGGTTCACTTTTGCAAAAT TCAAGTTCGGAAACTCATTCTTCAGGATTTAGTGGAAGTAGCATTGTTGGTGGGGGATCAGAATCAACAAAAGTACCCTCTGCACAACCTGAATGCAAAA GTGACTCTCCAGATGGTACAACAACCTCTGAATCCTGTGATGCCTTAAGAAACAATCCAAGTCAACCATCAAATGGAGATTGCATGTACGCCATTTCACT TGACATGAAGCATCTGCATGAATTGAATAATGATCACCCTCTAGCTGGTGGTCTATTATCTTTTGAGAATGAAAAGGATGCTGTTGAAGAATGGCAGCCT TCTGCGCTTAGAGAGAAGAGATTCCGCAAGCCTACAAAGAGGTATATTGAAGAGTCTTCAAATTTAAGGTCAAAGGAAAAGATACCGATTGCTGCTACAA AAAGTAAAAATTTGACTTTGTCATCATTTGATGAACTTAATGTGAGACCTAAAGCATTGGGAAAGATTCCAGGCGAGAAGTATAGGAATGAAAACAGTGA TGTGACACTTCCTGCGTTAAAAGTTTGCAGGGGACGTCCAAAGAAAAAGAAACTTGAAAATGACAAGGAGCCGCTTACCTCAGAGTCTGAGGATGAACCG AAAAGGAAAGATCGGAGAAAGAATCAGAGAATGTGGACTCTCCCTGAAGTGAAGAAGTTAGTTGATGGCATATCTGAATATGGAATTGGTCGGTGGACTA ATATAAAGAGGTTTTTCTTTTCTTCTTCAAGCTACCGAACACCCACAGATATCAGGGACAAGTGGCGTAATCTTTTAAGAGCCAGTTCTGCACAAAAATC TTCCGACAAAGAGGCTGAGCAAAATGACGAGCTTGCCTTACGCCCCTTACCAGTTGAATTGGTACAACGTGTGCGCGAATTGGCTAAAATTCACCCATAC CCGAGGGCACGTGGCTCAAAGAAATCATGTGTTAGTAGTAGTCTTGGCAAAAGAAATTTAAAGAGGAAGAGGTGTTCTTAAAAGTATACCTCCATGCCAT GTGTAACAGTCTCCAGTGAATCCATAGTCAGAAGAAACTTGTTGAAATTTCGGTATAGATTGCCTTTGCCTAAATTTTATACTTCCAGTTTCAAGTAATT TATGCTTGTGTATCATCTACAAAGGCATAGAAATTTTGTGTAAACTTGAGGAGTAATTGTTTAGCGTACATTAATTTGTTATGCTTAATGCGTAACCTCT GCAATAATGACTTTGTTTAGAAGACTGCAACAAGACATGAAGCTTGACCATGTGTGACAACTCTGCCCATAGCTCACTATTTCACATAGATGGCTGAGTG AAGAGAATTGGTAACCTAAGGTGAAACCATTGACACATTTAATTATCTATTTGCATTGATACATTGACCACCTTGCCCAGTTAGCTCGATGCTCTTCCGT GCCGTGCAAAATCTGGTTAAACTGGGATAAATCGGAATTACCTCATCACTAGACTGGACTATTCAAATGTCTTCAAAAGGAGGTCAATAAAGAGGTTAAT CTCACCCAGAACGAAATATAGTAAGATAGATCTCACCCATATGAAATCGTACAGTAGAAATGAAACAAAAGTGAAAAACAGAAGTAACTGTCAATCCTCT GTTACCTGCTGTCCATTGCTCGTTCGTCGTCCACTATCAATAGCTAGAAGAATATCAAAAAAATCCTTATATTGGTAATGTAAAGCCTTAACCATTATTG TGTTTAGATTTTTGTTTTCATCTTAGTGTGAGAGATGATATAACAAATATTACTCAGACATTAGGGATGACAATGAAACCGAATTCGTGAATATCCGTTC ATATCTAACCCAAATTTAAAGGGTTAAACCCACTGTCAATGGGTTCAGATTCGGGTTTTATACTATGTTAATTTTCGGGTTCGGGTTTGGTACATGTGAT ACCTGATCCCGAACCCGACAAGAACCCGAAAATATAGTAGAAAGTGGAGTTGAGACTAGTATATTATTAATATGTTGAGAGTTTTACCTTGATCTTCTGT CTGTAATGATAATGAATATTGATATGTAATGATATAATGGTCTAGATATTATTTTTCTAAACTACTCTTAACCTATTTTAGATAGGAAAGTCATGAAGGT TTTCTTAGAAAAAGTTGTGAATCTTAGATATTTAATGTGATTGTGATATAGAAAGGACAAAGAGCTTTGTATGGTTCAAGATTCCAGTGAATAATATTTC TTCTGTGTTGTCTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_46598; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_92354
Blastp | Telomere repeat-binding protein 4 from Arabidopsis with 29.79% of identity |
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Blastx | Telomere repeat-binding protein 4 from Arabidopsis with 29.79% of identity |
Eggnog | Telomere repeat-binding protein(ENOG4111C5T) |
Kegg | Link to kegg annotations (AT5G13820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460804.1) |
Pfam | Myb-like DNA-binding domain (PF13921.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |