| Id Trinity | FTRINITY_DN54886_c1_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_93420 |
| Sequence | ATTCCTAAGGAAAGGCTTATCAGGGACAAAAGATACGGTGGCTGTCGGTAAATCCAAGGTGGAAGAGGTAATTTTGTTAAGTAAATGATTTGAGATTGTG GTAGATAAATTTTTAGACAAGCATAAATGCATAATTACTAGGTTTCATTGTTTTCACCATTTCCCTCATAAAATTTTGTAAATAGTTATCAGATGATGGT ATTTTAATAAATATTATTGAAAACATATCAACTAAAAATCAAAACACAACAAAAACACTGTTATTGTGGGGATTTTATTTGATTATTACTTATGATTCTT TCCTTTGGGTTAATGGACTCGATTGGTTTTGGATTACATAATTCTGCCTGTTGGATATGAATGATTTTTAGTTTGTTATAGATAGAAAATTTTCATCGTG TCATTTTTCACTTGGTACTAATTGAATGGATTTTTTAAATTTCCCCTGCCTTGTCTTTCTCTATTCTCACATTCCCTTCTTTCTATATCTTTATATGCTA GTCATAGACGAAGTTATCATCACAATGTTTTTCTTAGCACAAATTTGATTCTCTGATTCTTTACTTTTATTCTCTCTTTGGTTTGGCACCATGGTGATTT ATTTCAGGTGGCAAAAAAAACCGCACAAAAGAGTAAAACAATCTTGACAGACATTGAAAGATGGCAGAAGGGAGTCGCAAGCACTGATGTATTTGGAGTT CCTGTTGAGGTTACTGTGCAGAGGCAAGATTGCAGCAAGCCTATTCCTCAGATATTGGTCAATTGTGCAGATTATCTTGTAGTTTCAGGATTGAACGCAC TGTATCTCTTTAAATATGACGGGGATAAAAAGGTTATTCACCAGTTGATTTCCCTATACAACCAAGATTCAAATGCTTCAGTGCCAGAAGGCACAAATCC AGTTGATGTAGCAGCTCTTGCAAAGTGTTATCTTGCTTGCCTTCCTGAGCCACTAACCACATTTGAACTTTATAATGAGATCAAAGGTGCTCGAACCAGT ATATATTCCATGAGAAACATACTGAAGAAGCTTCCCAGTGTAAACTACATGACTCTGGAGTTTGTGACAGCTCTTTTGCTCCGTGTTAGCCAGAAATCAC TTCTCAATAAGATGGATGCTCGGAACCTTGCAATGGAAATAGCACCTATTATTATGTGGCAAAAGGACCAGAGACCTGAATTCTATAGTCAATATTTGAA TCATATGTCCAAAAGTCCTTCCAAAAGGAGCTTGGATCCACCACCTGGTTCAGACAGTAACTTTGACATGCTTGCTGATGATGGTGAAGCCATAGTTGCA TCCTCTCCCATTCCTTTGGATGATGACACACCCGTTGACTTTGGTGCAATTGAGGTTGTTCAGTTGCTGATAGAACATCATAATGCCATTTTTACTGATG CAAATGAGACAGTCTGGAGATGAATGGTTTTATCCTTCCTCCTCATCTTTAAACATGAAATGTTAGTCTCATGAGGATCATTATATAACAGCTATGTTTG AAGTTAAAAAAAATTATGCTGATAAAAGAAGTTGATACTGCTGTGCAGCGTTAGGGCATGTTCGCGAGTTGAGTTTTGGAAAGTAATGAATGGAAATGAA AGGGTTTCAGAGCCATCTCACATGTGTATTTCATGATTCTGAGCTCTTTCTCTTACTTCCCTTCTAAAACCCAACTCATAAACATAAACAGAACATTAGT GAATAAAGTATCTGATTTTTATACACTTTTGTATTGAGAGGTGTGATTGTTGATAATTGGAAAAAATAATATATCAAATTTGTATTGTACAGATATTGCT TGTTGAAACTCATCACAGATATGTGATCTTTGTTTATAACACAAATTAGACCCATTTTTGCACACAAATTTGAAGGTCAATTTAGTGCACCTATGCAAGG GGTTGCATAAAAGCTTGTGTTAATTCAAGAGCTACACAATTGTGCAGCCATGAAATCTTTTGAAAGTGGAGAACAATTGATGCTTAAGACCTATTAATTC AAAGTGAATTTATAATGCAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46685; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93420
| Blastp | Uncharacterized Rho GTPase-activating protein At5g61530 from Arabidopsis with 64.96% of identity |
|---|---|
| Blastx | Uncharacterized Rho GTPase-activating protein At5g61530 from Arabidopsis with 69.12% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XRR2) |
| Kegg | Link to kegg annotations (AT5G61530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413910.1) |
| Pfam | RhoGAP domain (PF00620.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |