Id Trinity | FTRINITY_DN54889_c3_g2_i12 |
---|---|
Name Transcript | Ll_transcript_91964 |
Sequence | ATCAAAACAGAGAGAAGTTAATAATAATTAATAAATAAATAATAATAATAAATTAGAGAATGTGGTGAAGAAGGAAAAGCGAATCGAATCGAATCAAATC GGAGGTGGAGGCGAATGCGGTGGCGACGACGGTGTTATCAGAAAACTGAACCCTAAAACAACCGCGATGTGGGTTTTTTACTTGATCTCGCTTCCTCTAA CTACGGCCATGGTGCTCTTAACTCTTAGATACTTCGCCGCCCCACACGTCCCTCGCTACGTGCTCTTCACCGTTGGTTACACTTGGTTCTCTTCCGTCTC CATCATTATTCTCGTCCCTGCTGATATTTGGGCCACGATATCTTCAATCCATGACAGTGGAGGCATTTCTTTCTTTTGGAGTTGGTCTTATTGGAGTACG TTTTTGCTTACTTGGGCTGTGGTGCCCCTTATTCAGGGTTTTGAAGATGCTGGGGATTTCACTGTGTCAGAACGATTGAAGACTAGTGTACATGTTAACT TGGTCTTCTATCTAATTGTGGGATCCATTGGTCTTTTTGGACTTATTCTTCTCATTCTGATGCACAAAACCTGGAGTGGAAGTCTTTTGGGATTTGCCAT GGCTTGCTCCAACACCTTTGGACTTGTTACTGGTGCATTTCTTCTTGGCTTTGGTTTAAGTGAAATTCCTAAAAGCATTTGGCAAAATGCTGACTGGACC ACCCGCCAGAAAGTTCTTTCCCACAAAATTTCTCAAATGGCTGTCAAACTTGATGATGCTCACAAAGAACTTTCAAATGCTATTGTTGTTGCTCAAGCAA CATCCAAGCAGATGTCCAAGCGTGATCCTTTGAGACCTTACATGAATGTCATTGATGACATGCTAAGTCAACTGTTTAGGGAAGACCCATCCTTCAAACC ACAAGGTGGTCGATTAGGGGAAAATGATATGGATTATGATACAGATGAGAAGTCAATGGCAACACTAAGGCGTCATCTTCGGGGAGCTAGTGAAGAGTAT TACAGATATAAAAGTGAATATATGACTTATGTACTGGAAGCCCTTGAATTGGAAGATACAATAAAGAATTATGAACGCCGCAACTCAACTGGATGGGAAT TTAATTCGAGCATTAGACCACCTCGGGGAGGCAAGTTGGGATCCCTACTTGATACTTTAGAATTTTTCTGGCGATGTATTTTAAGGAAACAAGTAGAGAA AGTCTTGGCTGTTGTACTTGGTATCATATCTGTTGCCATTCTTTTAGCAGAGGCTACTCTTCTGCCTAGTGTTGATCTATCACTTTTCTCCATTCTTATT AAATCTGTTGGAACTCAGGAGGTGTTTGTGCAGGTGTTTGCTTTTATTCCTCTCGTGTATATGTGCATCTGCACATACTATTCCTTGTTCAAAATTGGAA TGTTGATGTTTTACTCACTGACACCCAGACAGACCAGCTCAGTTAACTTGCTTATGATATGCTCTATGGTTGCTCGTTATGCTCCCCCTATCTCATACAA CTTTCTCAATCTCATTCGCCTTGGCCCTCATAAAACAACTATATTTGAACAGGTATTTCTATGCAGTTCTGATAAATCCTTGATTCTCAAGTCTCTTGAA GATGCTATTTTTCTATAGCCTAATCCAACAAAATGGTGGGCACTGGGTTGTTGCTGTCTACTGTGATGCTTTTCCACTTGTTTGTCTTTTTTGGCATATA ATTTTTTTGTTGCTTGACTAAGCTAGAACACTGCTAAGTTATCTGAATTTCTGCATCAAAACATCTTTGCTTCCTTTCCTTCTTTGTAATTCCTTTTTTT ATTTTATAATTTGTCTCGTGATTTTGCTATGATTGCAGCGAATGGGGAACATCGACAATGCTGTCCCTTTCTTTGGGGATAAGTTTAACAGAATCTATCC ACTTATTATGGTTATATACACTGCCTTGGTTGCAAGCAACTTCTTTGACAGAGTCTTTAATTTTATGGGGAGCTGGAAGAGATATATTTTCAAAACTGAA GCTGAAGATATGGATGGTTTCGATCCATCTGGATTAATTATTTTACAAAGAGAGCGATCTTGGCTTGAACAAGGACACAAAATAGGCGAGCAAGTTGTTC CACTTGCAAGGACTTTCAATGGTGTTGATATTGAACCGGGCAACAATTTTACGGAGACGAATGGTGTTGAAATGAAAACAACTTCCAATTTAATTACCGA AGAACCATATGGAAGTATGTCTAAACATTTGAAGGAAGAGACAAGCAGACATGGTTCAAGCAGGGAAGCCATCAGCAACAAGTATGCTGCCATTAGAGAG CAGAGTAGTAGACCAGCCGAGAAAAATGTGCCCTATGCTAATTCCATGCTTGATGAAGGCAATACCAATTCTAATAACACAGACGTAATGCCATCTTCAG GCTTGGCGTCGACGTGGCTGAACGTGAAGAACGGCTTTCAGAATTTCAAGGCCAATGTTGGGGCCAAAAAGTTTTTACCCATTCGGCAAATACAGGAAGA TAAGATCTCATCTGCTTCGTCTTCTGAGTCCCTTGATGCAATATTTCAAAGACTAAAAAAGCCTTCCTCGGAACAAGTTATTTACAATTTGGAGGACTGA GGTGTATCTCAATACTTCTTCTGGTCCTTTGTCAAATGATATGTACAGAAACGGGAATATCTTAAATGATGTGATTAGAAAAAATGTGTACTTATCTTCC AATACAGCCTGAGATGGAAGATAATCTGCTACACAGAAACTCATACCTTACAAATTAATCTCATACTAAAGCTAGTTTATTCTTAGGGGGGTAGTAAAAA TTGTACCAGTACAAAGAGTTACCAATGTTTTGCATGGCTTTAACTGATAATTGATTTCTCAGATTGAATTGCTATTTTTTTATAGGAGGTCTTTCATGTT TTGCTCCTGAATATTTCTTTGTTAATTTTTCAGATAAAAGAAATCCTTGCTCATTTTGTTTTTTGCTCTGGAT BLAST |
Tissue | flowers |
Gene name | LI_gene_46702; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91964
Blastp | LMBR1 domain-containing protein 2 homolog A from Dictyostelium with 29.5% of identity |
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Blastx | LMBR1 domain-containing protein 2 homolog A from Dictyostelium with 31.81% of identity |
Eggnog | LMBR1 domain containing 2(ENOG410XR8P) |
Kegg | Link to kegg annotations (DDB_G0284019) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415517.1) |
Pfam | LMBR1-like membrane protein (PF04791.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |