| Id Trinity | FTRINITY_DN54902_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_101563 |
| Sequence | AGCATGGGCTTGTTGTCAATTTTTATGGTTTTGGTTTTAGTTTTTGACTCTTAGATTCATAATTATGTCTTTGTGATGAATTTGAGCATGGGCTTGTTGT CAATTTTTATGGTTTTGGTTTTAGTTTTTGACTCTTAAATTCATAGTTATGTCTTTGTGATGAAATTGAGCATGGGCTTGTTGTCAATTTTCAGTTTTTA TGGTTCAAAGGCAATTAATTGGATGCTATGTGAAGAATATGACAACCACATAATGTAGGAATTGATGAATTTGTGCATTTACATGTTGCCAAAATTCCAT GCTCTTATTTTTAGTTTTTAATTTTGATGCATAGTTATACCCGTTTGAAGAATTTGAGCATGCCCATTTTGTCAACTGCCATTCTTTTTCTTCCGAGACA AATTAATTTGATGTCACATGAAGAATATGAGAACCCTATTATGTGGAATCGGTTAAACTTGTCTCCTTCTATGTTCTGATCCATTGTAGGAGGTGGATCC AACTGTTGAACATGACGAGATGACTGAAGGGATGGATAGTTTGTTCTCTGAGCTGGCTGGTGCAATTCCTGGAATCGACGAGGCCATGAGTTTTGCGGAG ATGTTGAAATTGGTGCAGACAATGGATTATTCTGTTATAGTATTTGATACTGCTCCCACTGGTCATACACTCAGACTATTGCAATTCCCATCAGTTTTAG AAAAGGGTCTCGCAAAAATTATGTCATTGAAAAGTAAATTTGGTGGTTTATTTAATCAGGTATGAACTTAAGATTGCTTTTTCTTGCATCCCATGATATT TTCTTTACTAGTTTGAACTTTGAAGTTGACTAGGTTGAGTTTCAGTATGCACTATTTAGACCATATTTATTTTTTTTATTTTTATTTTAACATATTATAT TCCCTCATAGAGGATCTAAAATCATTACAGTGGTGCATTTTTTATAAAGATATTGAAGGTTACTTTAATATATCAAAGTCTTGATTTTCCATCTATTATT ATCATCTATATGTCTGACATGAAATATGTGCATGTCTGTGGTGCTTTTCAAGATGAAATATGTGCTTTTCAAAATGAAATATATTGTCAAAAACTACTAA GAAATCTTGGTATCATAGTGGCATTCTCCTTTCTCCTCATTTAATGAAATGAAGACCATTTGATGCCTGCTATACTAGTTTCTCTATTATTATCATCTCG GATCACAAGAACCCACCATGTTGGAGCCTCATGCTCTGGGCCACCACCATTACTAGCATCTGTGATCAAATTCAGTGTTGGAAAATGGAAATGGGCTATC TTCTTCTTGTAGCTATTGTTGCCTATTTTTTTGCATTTAATAGTCCAACTCCAAACACATTCTGTGTGAAAAATAAAAAGTTCGGACCCTTATGGATATA TACATCTACATTATTATCCTGTGAGTTGGGACAAGCATCTTTGATGATCAGTGAGATCATATTTGTTTGCTTCACCATCTATGGTGTAAATGGAAACTTT TTTGAACTTCTGTTGCAGATGACTCGCATGTTTGGCATGGGCGATGATTTTGGTGATGATGCAATTGTTGGGAGGCTTGAAGGCATGAAGGAAGTGATTG AGCAAGTTAATAAGCAATTTAAGGATCCGGACATGACAACCTTTGTCTGTGTTTGCATTCCGGAATTCCTTTCACTTTATGAAACTGAGAGATTGGTTCA GGAACTTACAAAGTTTGAGATAGATACACACAATATCATCATTAATCAAGTACTCTTTGATGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATG AAAATGCAACAGAAGTATCTGGACCAGTTTTACATGTTGTATGATGATTTTCACATTACCAAGCTGCCATTGCTCCCAGAAGAGGTTAGTTGTTGTGTTC TTGAAAATGGTATACAGCAGAACCATACATATGTACTACATACATGCAACAACAATAACAACTAGTAAAGCCTTCTCTCAGTAAGTGTGATCGGCTATAT GAATGAAACGATGTCACTATACAACAACATCTAAACCTTAGTTCCAATAGGCAGAGTCGGCTATATAGATTGAACAATGCCATAATGCTCTATCAAATGA TGCCACTATGTTCTATCAAAGACCAAAGCCTATAATAGGCTATTTAGGACTTTAGGGCAAGTTTGGATAAACACAGTTTAATTAAGCACTTATTCAAAAA ATTTCTTGGAAATAAGCTAAAAAATAATCTTACAGGAATGTCTTAACCTATTTTTAGAAGTTTATTTCATAAGCTGATCTCGTAAGCTCAAATAAGTTCT CTATAAGCTCTTTCAAAAACACCCCAAAGTTTTCGCAAGGGTTTCACCTAGAATTTTAGCATTGCCCTCCCTCTAATTATGGGGCCATTCTCCCTCACAG GCTTCTGTTGATCTTATCATGTTCAAGCCATTTTAGGCACGAATCCACATAGCCGTACTGTTACTTTCCCTCCAATTCATTCATTTTCGCTCTTGCACTT TCTTGTATGCCCACTTATCCATGATCCAACTGCACACTTAATTGCAAAACTTCATGTTTGATGAACTGGAGATAGTAAAACAACTTTTTATGACTATTTT CGATAAAACATCGAAACCTTGTAAATGGTTGAATTTCTTTCATCAGTTATTATTCCTTGCTTGTTTGTATGAGCCTTTAATTAGCCAATATAAATTGATA GGTAACAGGAGTTGATGCACTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46803; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_101563
| Blastp | ATPase get3 from Schizosaccharomyces with 55.47% of identity |
|---|---|
| Blastx | ATPase get3 from Schizosaccharomyces with 55.47% of identity |
| Eggnog | ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting (By similarity)(COG0003) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460892.1) |
| Pfam | Anion-transporting ATPase (PF02374.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |