| Id Trinity | FTRINITY_DN54902_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_101564 |
| Sequence | AGCATGGGCTTGTTGTCAATTTTTATGGTTTTGGTTTTAGTTTTTGACTCTTAGATTCATAATTATGTCTTTGTGATGAATTTGAGCATGGGCTTGTTGT CAATTTTTATGGTTTTGGTTTTAGTTTTTGACTCTTAAATTCATAGTTATGTCTTTGTGATGAAATTGAGCATGGGCTTGTTGTCAATTTTCAGTTTTTA TGGTTCAAAGGCAATTAATTGGATGCTATGTGAAGAATATGACAACCACATAATGTAGGAATTGATGAATTTGTGCATTTACATGTTGCCAAAATTCCAT GCTCTTATTTTTAGTTTTTAATTTTGATGCATAGTTATACCCGTTTGAAGAATTTGAGCATGCCCATTTTGTCAACTGCCATTCTTTTTCTTCCGAGACA AATTAATTTGATGTCACATGAAGAATATGAGAACCCTATTATGTGGAATCGGTTAAACTTGTCTCCTTCTATGTTCTGATCCATTGTAGGAGGTGGATCC AACTGTTGAACATGACGAGATGACTGAAGGGATGGATAGTTTGTTCTCTGAGCTGGCTGGTGCAATTCCTGGAATCGACGAGGCCATGAGTTTTGCGGAG ATGTTGAAATTGGTGCAGACAATGGATTATTCTGTTATAGTATTTGATACTGCTCCCACTGGTCATACACTCAGACTATTGCAATTCCCATCAGTTTTAG AAAAGGGTCTCGCAAAAATTATGTCATTGAAAAGTAAATTTGGTGGTTTATTTAATCAGATGACTCGCATGTTTGGCATGGGCGATGATTTTGGTGATGA TGCAATTGTTGGGAGGCTTGAAGGCATGAAGGAAGTGATTGAGCAAGTTAATAAGCAATTTAAGGATCCGGACATGACAACCTTTGTCTGTGTTTGCATT CCGGAATTCCTTTCACTTTATGAAACTGAGAGATTGGTTCAGGAACTTACAAAGTTTGAGATAGATACACACAATATCATCATTAATCAAGTACTCTTTG ATGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAACAGAAGTATCTGGACCAGTTTTACATGTTGTATGATGATTTTCACATTAC CAAGCTGCCATTGCTCCCAGAAGAGGTTAGTTGTTGTGTTCTTGAAAATGGTATACAGCAGAACCATACATATGTACTACATACATGCAACAACAATAAC AACTAGTAAAGCCTTCTCTCAGTAAGTGTGATCGGCTATATGAATGAAACGATGTCACTATACAACAACATCTAAACCTTAGTTCCAATAGGCAGAGTCG GCTATATAGATTGAACAATGCCATAATGCTCTATCAAATGATGCCACTATGTTCTATCAAAGACCAAAGCCTATAATAGGCTATTTAGGACTTTAGGGCA AGTTTGGATAAACACAGTTTAATTAAGCACTTATTCAAAAAATTTCTTGGAAATAAGCTAAAAAATAATCTTACAGGAATGTCTTAACCTATTTTTAGAA GTTTATTTCATAAGCTGATCTCGTAAGCTCAAATAAGTTCTCTATAAGCTCTTTCAAAAACACCCCAAAGTTTTCGCAAGGGTTTCACCTAGAATTTTAG CATTGCCCTCCCTCTAATTATGGGGCCATTCTCCCTCACAGGCTTCTGTTGATCTTATCATGTTCAAGCCATTTTAGGCACGAATCCACATAGCCGTACT GTTACTTTCCCTCCAATTCATTCATTTTCGCTCTTGCACTTTCTTGTATGCCCACTTATCCATGATCCAACTGCACACTTAATTGCAAAACTTCATGTTT GATGAACTGGAGATAGTAAAACAACTTTTTATGACTATTTTCGATAAAACATCGAAACCTTGTAAATGGTTGAATTTCTTTCATCAGTTATTATTCCTTG CTTGTTTGTATGAGCCTTTAATTAGCCAATATAAATTGATAGGTAACAGGAGTTGATGCACTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46803; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_101564
| Blastp | ATPase ASNA1 homolog from Culex with 61.93% of identity |
|---|---|
| Blastx | ATPase GET3 from Coprinopsis with 58.64% of identity |
| Eggnog | ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting (By similarity)(COG0003) |
| Kegg | Link to kegg annotations (CpipJ_CPIJ005690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460892.1) |
| Pfam | Anion-transporting ATPase (PF02374.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |