Id Trinity | FTRINITY_DN54906_c6_g1_i7 |
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Name Transcript | Ll_transcript_103455 |
Sequence | CTAAAACCCTTGTTCCTGTGCCTCTTTCTCGTCTCAAGCGGAAAAACAACCATGGCTACCGTTTCCGCTAAGAACAAAACCAAGACGAAGACGAAGAAGA AAGACCGATACGGCGTCGCTGAACTCAAAACCCTAGGCAACGACCTTCTCTCTTCCGCTTCAAGCATCAACAACCTCCCTCTCCTTCTCACCTTCGTTTC CCCTTCTTCTCCACCTCACCACGTTCTCGAATCACTCCTATCTCTCCACTCCTTCTTCCTCCCTCTCCTTCCCACGCTCCCTTCCTCCGCCACACGCGCC GATGACACCACTGCCGATGACTCCACCGCCGATGACCAATCGCAGTTCATCTACCTCACCTGGCTCCGTTCCAAGTTCGATGAGCTCGTTAAGTCCCTCG TTGAAATCCTCGTCGCGCCGCAATGCGATGAGACTCTGCAGGAAGTCGTGTTGGATACTTTTATGGAGTTCATTAAGGTCGCTAATGCTGGTCAATTTCA CTCTGCTATTTATCACAAGCTACTCCGTAGTATTGTTCATTCTACTGATCCGGTTGCATTTTTGGTGGATTTACTAGCATCGAAGTATTTCAAGTATATT GATATCCGTTATTATACATTCATAAGTCTAATAAAGCTCGCTACAACTTTGGAGGGAAAAGATTCCACAGATGGTAGAGTTGCGAGTGCAGACGGCACCG ATGAAAGTCAATTGAGCTCAAATATGGAGCATGTTATCCACAATATCTATTACACCATATCAAATGTACCTCCCCTTGAAAACTCAGATGATACATCAAA TATTGAAATGTGGAGCAGATCAGAAAGTGATGTGGATGCAGCTGAAGAGCAGCCAAAGCCTGAGAAGCATAACAAAAATGTATTGTCTGCAGCTAAAATT GCCAAGAAGATAAAATTAAAGTTTACTAAAGCATGGATTGGGTTTCTTAGATTGCCACTTCCACTTGATTTGTACAAGGAGGTTCTTGTTAACCTTCATC AAGCAGTTATTCCTCATCTGTCTAATCCTATTGTGTTATGTGATTTCTTAACAAGATCATATGACATTGGTGGTGTAGTCAGTGTGATAGCTCTTAGCAG CCTTTATGTCCTAATGACCCAATATGGACTTGAATACCCAAATTTCTATGAAAAACTTTATGCCCTCTTAGTTCCATCTATCTTCTTGGCAAAACATCGA GCAAGGTTTTTCCAGCTCCTTGATTCTTGCCTAAAGTCACCACTTCTTCCAGCTTACCTGGCTGCTTCCTTTGCTAAGAAATTGAGTAGGTTATTGCTTT CAGTTCCTCCTTCAGGAGCGTTGGTTATTACGGCTCTGATTCACAACATTTTGCGCAGACATCCATCAATCAACTGTTTGGTGCACCGGGAAGACAGTGT TGATGAAGAGAAAGATGATCTCAGAAAAGATGAAACAATAGCTGCTAACTTGGATAATGCCAAGACTGGAGCAGTGCCCTGCCAGAAATTAGGCATTGAC CATTTTAACAATGAGGAAAATAATCCTAAGAAGTCGTGCGCAATGAAAAGTTCTCTTTGGGAAATTGACACTATTCTTCAGCACTACTGTCCTCCGGCCT CACGGTTTGCTCTGTCTCTTGGGAATGATCTGACAGTGAGGGCCAAAACGAGTGAAGTTGATGTTGGTGATTTTAGTTCCGGTTCATATGCAACAATACT TGGAGCAGAGATATCACGGAGGGTAAAGCAGGTTCCTCTAGCATTCTACAAAACAACTCCTTCCTCTTTGTTTTCAGAGACTGATTTTGCTGGTTGGACA TTCAACCTTGAAGAAACTCCTGAATTGATCAGTGGCAATGATGAGAGTGCAACTAAGGATTTATCGGAACATGATCATGGTGGTGCCGTGAAACGACAAC GGATTGAGTGCCCATAATATATGTTTGTCTCCCTCAAAAACTTGTCTGATTGTTGTCCTTTCTTTTTGCTGGCAAAGGGTAGGTAGGATTAGGACTAAGC TTAAATGTTCCATTATTTATTAAATTTGTATGATCCTCTCATATATGCTCTTCAATAACAATTACTTTGTTAAATCACTTGACTATATGGATGAATTGAT GTGGTTGTCTCATTTTCCATTTCTTCTTACACTGCTCCCTTATTTTCATTATATGTATAATCATCAC BLAST |
Tissue | flowers |
Gene name | LI_gene_46849; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_103455
Blastp | Nucleolar complex protein 4 homolog B from Xenopus with 30.78% of identity |
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Blastx | Nucleolar complex protein 4 homolog from Mus with 30.21% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (414653) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432831.1) |
Pfam | CBF/Mak21 family (PF03914.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |