| Id Trinity | FTRINITY_DN54913_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_101472 |
| Sequence | GTGTCGTTCAAGCATGGGCAAGTTCCTCCTGTAATTTCGCTTGACAGATCAAGTTCCTTGTATCTTCCCTCTCTTATTCACTATTTTAACAAACCCTCGC TATTTATCTATCGCTACCGTGGTAGCAAACCCTAATTTCGTAATTAGATTTTTCCCCCGAATTTTTTTTCTGCCGCAGAATTATTGATATGGCTAAGAAC TCATTCAAGTTTGAAATACCCCTCGGTGAACTTTATTTTTCTTCTTTTCTTTGTATTTATTTTCTCCAGTTTTTATTATTTAGGTGTTGAGTTTGATAGT GTATTTTCATCTGGGAATTAATCTCTGTGCTTAGGATTTTCGTGTACGAACCTAAAGCATTTGAATTTTCATATACGGGTTTTGTAATTTTTTATCTGGG TTGTGAAATTTTGTATTTTTTAGCCCAATTATGTGTCATTCCTTGAAAAAAATAACTTTTTTAATAGAAATCTTTACTCAATCAAGTGCAGTTGTTTTGT GTTAATTTTATGTTTTTTCTCTTGTCATTTAGTTGAGTATAAACAATGACACATGTTATAAAATTAAATGCACTTTATTTGCTTCTTTTTTATTCCATAT GATGCGCTATGTGTTACTTTAATCCCAATGAATTGGTTTTTTGTTTTAACTTTTAAGTTAGATACCCTCTCTTCATCCCCCTCCTAGGGTGGTCTGAAGT TTCTGTTGCCATTGTAAAAGAAATCTCGTTGTATTTACTTCATACATGATTGTGTAAAAAAATGTTTTTGTTATTAATCTACTAGGTCTAAGTCTAACAT ATGTTTTCTATTCATACAAATATTACATTGCCAGAAAGGAGGCAGGCTGAAGCAGTTCGCATAAGAGAGAACTATCCGGATAGAATTCCAGTAATTGTTG AAAGGGCAGAGAAGACTGATGTTCCTGAAATTGATAAGAAGAAGTAAGTTTCCTTTTCTTTTTAAGTATTATTATTTGTTTCTTGATTACATTGTTAATT TTTTTACCGTGGTTTAAAAATAGACACTTAACTGTACCTTACTTTTACTTGGAGTTGAGACATTTTGGTTATATTTTCATTGTGGTTTGGCTGGATTCTA GAACCTTTCAGAGGTTGAGTGTTTTCCTTCTGTGAATGTGGCATCAAATTAAAATGTTCCCGAAGTAGCAAACCTTATGAATTAGTTTTTGACATGGTCC AGAGACCAGATGCACCATGTTTTGTTCTATACACTTAATAATGGTATGGTAGCATAAGATGGGAAAGCAGTAAAGAATGTAAAAAACAGTATTATGATCT TGCATCAAAGAAAATAAGGATCAATGATTCACTGCTACAGTGCTATGCTGAATTATGATTATATCAGTAGATGCTTTGGTTAAACAGCAACAAGAGAGTT TTGGTTAAGGTTTCAGTTCGGTGTTAACAATTGAAGGTTCAGATTGTTGAAATCTCATGACACAAAAATGACAGTTTAGGAGGTTGGATGTCTTTTACTT ACCCTCATATCACCCTCCAAAACAAAAGAAAAAATTGTTGGGCGAAAATCCCTTAAAACATTGGGGGAATAAGTGAATTGGATTGAACACTGATCTTTAG TATAGAGAAGAGCATGTTTGCTATCTTCTATGTTTTCATTTCCCTAATGTCACTGTTCTTTAACAACCATCTGAATGTTCTATTTTATTTTGTGGATACT GATCCTCTGCTTTCACCTTCTTATGTCCCCTTTATTTTTGGTATCATTGTTCCCTTTTTGGTTGAATGTAGGTTCCTGGTTCCTGCTGATCTGACTGTTG GCCAGTTTGTGTATGTGGTGCGGAAGAGAATCAAACTGAGTTCTGAAAAGGCCATCTTCATTTTCGTCAAGAACATTTTACCGCCCACTGCGGCTATGAT GTCGGCAATTTATGAGGAAAATAAGGATGAAGATGGATTCCTGTACATGACCTACAGTGGGGAGAACACATTTGGGATGATGATCTGAAAGAGTTAATGA GAGCCTTGAGAAGCAATCATGTGAATAGAACTTCCTGAAGTCAATGTGCAGACATTGGCTTAATTGTAAATTCGCTGGTTTGAAATTTGAACTGTTTCTG GCAATCATTCTAGAATGCATAAGGGTCTTTTTGCTATCCGAAATTTTCTAGCTTCATTTTTATTTCCAAAAAAATAATTATAATCATTTTATTATTAGAT TTACAAAAACGTTTTGTTTTATAAAGTTGAGAAGTGTTTTCACAAAATCAAAACGTTGAAGATATGTTTGGCACTATACTTTGAATATCTTGTCAAACAT GTTTGGTTTATACATATTTTTAATCTGGTTTATTACAACAACCAATGGTTGTCTCGAAAATGAAGATGTCGTGGGTCCTTGATCTCATCATCTTCAAAAT AGAGGTTGAGAATGAGAGATTGGTCCTGATTCACACGAAATTCTACATACCCATGTCACTTTGGTCAAAGCTTAAGCTAGTGATGATTTAGGCTACTGAA TTTTCATCAACTAGGCCTTTCGATGCAGCACTTCACTGCATCTCACTAAAGCTATGTTCCAATACTTGTTTGTCCTTTAACCCCAAAATTTGCATGAAGT CATGAGTCGAATGGCAATTATTCCAACAACTTTATATTAATTAGGAAACCTAAGGATTCTGATTATATGGCTAAAGTTTGGTCCTTATTTATGGAGAGTA TTAATCGTTGGAGATATATTGTGACTCCATAAAAGATTTCATAAAGTCTCAATTTTTTAGATGGTAATCGTGTTAATTACTTAACATGAGTAATGATCCT CCTAACAAAGCAATATGCATTGGCAGGGAAAATAATAATATTGATATCTTCAATAATAAAATTGACTTATAGTTCAGATTTCATGTTAGCAATGAACAGA TATTTATAACTCCTTTAAGTTTCACTCATTCAAAATCCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46930; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_101472
| Blastp | Autophagy-related protein 8C from Oryza sativa with 82.28% of identity |
|---|---|
| Blastx | Autophagy-related protein 8C from Oryza sativa with 82.28% of identity |
| Eggnog | Microtubule-associated protein 1 light chain 3(ENOG4111JAT) |
| Kegg | Link to kegg annotations (4344857) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451216.1) |
| Pfam | Autophagy protein Atg8 ubiquitin like (PF02991.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |