| Id Trinity | FTRINITY_DN54916_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_103861 |
| Sequence | CAAAAAAATCGCTACCGCCATATATATCAACAAAACCCTAATCCATGATTGTGCTCTGCGGCACCATTTTTTCAGTTACATCTTCAACTTTTTCTCTCAA CATCACAACAAAGCAAAAACACAACAATGGCGAAGAAGAGAGAGAGAAGCGTGAACGTATCTGGAAAGCCGAAGCACTCGTTGGACGTTAATCGGAGCAA TGACTCGAGCAAGAAGGAGTCTCGCTCCGCCTCCACCGTCCGCCGCCTTAAGATGTACAAAACTCGACCGGTTCGTGACCGCAAGGGAAAGGTGCTCAGC CATGACCTTCAGTCTAAGGAGCTTCCTTCAACGAGGATTCAACCTGATCGGAGATGGTTCGGGAACACAAGGGTTGTAAACCAGAAGGAACTTGAGTTTT TCCGGGAAGAGTTGCAGACCCGAATGTCTAGTAATTATAATGTTATTTTGAAGCAGAAGAAACTGCCTTTGTCACTCCTCAATGATCGTCAAAAGCAATC AAGGGTTCACCTTCTTGATAGAGAGCCTTTCACAGATGCATTTGGGCCTAAAACTAAAAGAAAACGCCCAACCCTCTTGGCAGCTGATTATGAGTCCTTA GTTCAGAAAGCTGGTGGTTCTCAAGAGGCATTTGAACAGAAGTATGATGCTAGTGCATCTTCAGAAGCTAATGAAGCAGATGGTTTTAGAGATTTAGTGC GTCATACGATGTTTGAAAAAGGTCAAAGTAAACGCATATGGGGTGAGCTCTACAAAGTGATAGATTCTTCAGATGTTGTTGTCCAGGTTCTAGATGCAAG GGACCCACAAGGAACAAGGTGTTATCATTTAGAAAAACATTTGAAGGAAAATTGCACGCACAAGCACATGGTGCTTTTACTGAACAAGTGTGATCTAATT CCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACTCTGGCATTCCATGCAAGCATAAACAAGTCTTTTGGAAAGGGTTCAC TTCTATCAATTTTGAGACAATTTGCTCGATTGAAAAGTGATAAACAAGCAATATCTGTTGGATTTGTTGGATATCCAAACGTTGGGAAGTCATCAGTGAT CAATACATTGCGTACTAAGAATGTATGCAAGGTTGCTCCAATTCCTGGGGAAACGAAAGTCTGGCAGTATATTACTCTTACGAAGAGGATCTTTTTGATT GATTGTCCTGGTGTTGTCTACCACAACAAAGACACTGAAACAGATGTTGTGCTAAAGGGTGTGGTACGTGTGACAAACTTGCAAGATGCTGCAGACCATA TAGGCGAGGTTTTGAAACGTGTGAAGAAGCAGCACTTGCAAAGAGCGTATAAAATAAAAGAGTGGGAAGATGATAATGACTTCCTAGTCCAACTTTGCAA ATCAAGTGGCAAACTTCTTAGGGGTGGTGAGCCCGACCTGATGACCGCGGCAAAGATGATACTTCACGACTGGCAGAGGGGTCGTATTCCCTTTTTTGTT CCACCTCCACGTCTGGATGACCCCTCTGAGGAACCTGTAGTTAATGGTTTGGACATTGATGAAACAGTTGATAGCAAGCAGGCATCAGCAGCTATTAAAG CTATCGCAAATGTTCTTTCATTCCAACAGCAAGGAAGCTTGCCTGTTCAAAAGGACTTGTATAGCGAGAACGAGTTGAAGGGTGAAACTGCTGACCAACT TCCAAACACGGTCGATAATACATATGAAGAGATTCAGGCATCCGATAGTGACACATCTGAGCAGGACCTAGCCACCGAGAATCCATCTGATAGCAACACA TCTGAGCAGGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_46956; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_103861
| Blastp | Nuclear/nucleolar GTPase 2 from Oryza sativa with 75.56% of identity |
|---|---|
| Blastx | Nuclear/nucleolar GTPase 2 from Arabidopsis with 71.78% of identity |
| Eggnog | Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161) |
| Kegg | Link to kegg annotations (4332852) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456163.1) |
| Pfam | NGP1NT (NUC091) domain (PF08153.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |