| Id Trinity | FTRINITY_DN54925_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_101138 |
| Sequence | TGAATATATAAACACATGACATTTCCATTCTCTTCTTATTTCTATTCCCAATCTACCCCTCTAGGTCTCACACACTATTCACACCTATTATATCCTCTTC ATTCTAAACCCTAGTTCTCTTCGATTCGCTCATAGATTTCTCCATTTTCACGTTTCATGCTTTAATCCATGAGTTTTCCAGTTACTTCCGGTGCCTCCGC CGCGATGCCGGCTTCCGGCCACCGCGGAATCACCTTGTCCAACACAATCCACTCTGAGGTCGCCTCGTGCTTGCCGTTGCCGTCGCTGCCTTTGTTCTGT GGCGCCTCCGATCAGGACCTCCGCCTCGGAGATTATAGGTCGATGATGCTGAACCGCGCCGAGGTGCTTGCTCAGTCGAGCAAGATCGCTGAGCTTCTCG AACATACCGATGTGTCGTACTTGAAATTAAGAGATGATGCCAATGGTGTTCCATATACCTACGTTGAGCCTTCAGAACTTCATGGTGAAGTTCTTAGGTG CAATCCTGAAGCATTTGAGTACAGCATCACAGGTCCTATAAAGGAGCAGATCTCTGGTAGTGTGTTACCTGAAAAGACGCTCTCTGAATCTAGTTTTCCT CTCACAAGTCAAACTCAAAATGACTACAATGCAACCTCCAGTTGCCAGCTCGATAACTTTTCTACCAATGATATTGTTACACTGTCTTCTAAAAAATCAA AACTCAAGAAGAAAGGTGGCAATGGAGTATCTATAGCTCCTGATGCTGCTGAACTTCAAGATGCCCACATTGGAAGGTTTCTCGAGATTTTGGAGGACTT ATGCAGCAAAGCTGAATGTAACAATGATGATCGAGATGAAGAAGAGTGGTTGTCAGTGCCTCTTTCAGATCTTAGAATGCTTGTTAATGAAATAATGTCT ATACGTGAAAAAAAGCTTCTGCATTTTGTTCCGGTAGAACTCCTTGTTAGATTATTAAAAGTTCTTGATCATCAAATACATAGAGCAGAAGGCCTGTCAA TCGAGGATCTTGACAATTCAGATTCAGACGTAGTTTCATCTATTTTAGTTGCATTGGAGTCCATTCATGCTGCACTGGCAGTGATGGCTTATACCGAAAT GCCAAAGCAACTTTATAATGAAGAGATCATTGAGCGAATTCTGGAGTTTTCCAAGCGCCAGATAATGGACGTGATGTGTGCATGTGATCCATCATTTCGA GCATTACATAGGCCGAGCGAAAACACTGCATTTGAAGGTGATGATTATGAAGAAGTTGATGCTGAATTTGGTTCAGCAACCAAGAAACGGCGTACTAGCA AGACATTGAAGTTGAGGAAATCAACATCTAGCAGGGCCTTTACTGCTGAGAATACCATTCTTCAGAAGTTGTGCACTGTTGTTGGACTACTGAAAGATTT GTTGTTAATAGAGAGGTTATCTGATAGCTGCATCCTACAACTTGTAAAAACAAGCTTTACCACATTCTTGGTTGAGAATATCCAGCTTTTGCAATTGAAG TCAATTGGTTTGCTCTGCGCGATATTCTATTTATACACACAGCATCGTACTTATGTGATAGATGAAATGCTTCAGCTTCTTTTGAAATTACCCAATTCAA AGCGAACTTTAAGAGCTTATCATCTGCGTGAGGAAGAGCAAAGACAGATCCAGATGGTTACTGCTTTGCTGATTCAGTTAATTCACTGTAGTGCCAACCT TCCTGATGCTTTAAGACAAGCATCGAGCGGTAATGCTGTATTAGAAGTCTCAGTTGATGGTAGTTATCCAACTAAATGCCATGAGGCATTAACAGATGCT TGCTGTCTGTTTTGGAGCCGTGTACTCCAGCGGTTTGCAAGTGTGAAGACTCATGATGCCTCTGAGCTGAAATCCATAATGGAGAATCTTGTCACGGATT TACTGGCGACTCTGAATTTACCTGAATATCCTGCTTCAGTTCCTATTTTAGAGGTTCTATGTGTCTTACTACTTCAGAATGCTGGGCCTAAATCTAAGGA TGTCTCTGCACGTTGCATGGCGATTGATATACTTGGTACAATTGCTGCAAGGCTGAAGCGCGATTCTTTGATTTGTAGCCAGGAAAAGTTCTGGATACTT CAGGATTTACTTAGTCAGGATACTGCTACACAGAATTATCCAAAAGATACATGCTGTGTCTGTTTGGGTGGAAGGGTAGAAAATTTGTTCATGTGCCATG GCTGCCAGAGACTTTTTCATGCCAATTGCCTGGGCATTAAAGAGCATGAAGTTTCCAGCCGGAACTGGTACTGCCAGATATGCATCTGTAGTAAGCAACT GCTTGTATTACGATCATATTGCAATTCCCAATGCAAGGATGAAGTGACAAAGAATTGTGAAGTGGCAAAAGTTGATTCTGAAGTTTCTAAGCATGAAATT GTTCAGCAGTTACTTTTGAATTTTCTTCAAGATATCACCTCTCCTGATGACTTGCATGTTTTCATTTGCTGGTTTTATCTCTGCCTTTGGTGCAAAGATG ATTCAAATTGTCAGCAGAAGTCCAAGCACTACCTTGCTAGAATGAAATCAAGAATCATAGTTCGGAATTCTGCTACTGTCTCTTCTATGCTGACAAGGGA TTCAATCAAGAAGATTACTTTAGCTTTGGGTCAAAACAGTTCATTTTGCCGAGGGTTCGATAAGATTCTTCACGTGCTTCTGGCAAGTTTGAGGGAGAAC TCTCCGATTATTAGGGCTAAAGCTTTACGAGCAGTCAGTATTATTGTAGAGGCTGATCCCGAGGTATTAGGTGATAAACGTGTGCAATCAGCAGTAGAAG GAAGGTTTTGTGACTCTGCAATATCTGTAAGAGAAGCAGCATTGGAACTTGTTGGTAGGCATATTGCTTCGCATCCTGATGTGGGTTTTAAGTATTTTGA GAAGATTGCAGAGAGAATCAAAGATACTGGACTAAGTGTTCGAAAGCGAGCTATAAAAATTATTCGAGATATGTGCAGTTCAAACGCGAATTTCTCTGGG TTTACCAGAGCTTGCACAGAGATAATTGCACGTGTTAGTGATGATGAATCAAGTATCCAGGACCTTGTTTGCAAAACATTTTACGAATTTTGGTTTGAGG AACCTTCTGCTTCACAAGCTCGGGTTTTTGGAGATGGTAGTACCGTTCCACTCGAGGTAGCTAAGAAGACAGAGCAAATTGTTGAAATGCTGAGGAGAAT GCCCAACAATCAACTTCTTGTAACTGTAATCAAGCGCAACTTATCACTTGATTTTTTGCCACAGTCTGCAAAAGCTGCTGGGCTCAACCCTGTGTCCCTT GCAACAGTACGTAAGCGATGTGAGTTGATGTGCAAATGCTTGCTGGAGAAGATATTGCAGGTTGAGGAAATGAGCAGTGGTGAAGTGGAAGTGCATGCCC TTCCATATGTTCTGGTCCTGCATGCATTTTGTCTTGTAGATCCAACTCTCTGTGCACCGGCTTCTAACCCTTCTCAATTTGTTGTTACCTTGCAGCCATA TCTTAAGACTCAGGTTGACAATCGCATGGTGGCACAACTACTTGAGAGTATAATATTTATAATTGATGCTGTGGTTCCCTTGCTCCGGAAGTTGCCACCA AGTACTGTTGATGAGCTTGAACAAGATTTGAAACAGATGATTGTCCGGCGTTCTTTTTTGACAGTTGTCCATGCTTGTATCAAGTACTCTCGATTTCCCA CCATTATTTTCCCATGTTAGCCGTCTCTATTATTTATTTTCTGCTTCAACCTGAAATTAACTGGCTGATAAATTCATGTGATGTGCATTTCTCTTTTTCC TGGAAACAACCTCTCTGCTTGCGGGAGTAAGGCTACATACATCTACTCTCCCCAGATCTCACTAAGTGGGAGCCTCATGCACTAAACCACCTTTTTTTTG CAGTTGTCTAGACTGCTGTATGTTCAACGGAGCTTATAAATGCAAATATTATTTAAATTTTTTTATACATCAAATGGGAATATCTGAATAATTTTATTAT GCAATATGTAAATGTCTGTGCAAGAATATGTATTCTTTGAAGTTTGAACAGTAATTAGCAGACCACAATATTTCGTGAAGCCCTTAACTAACTAGGTTTA GCTTTTTAGTTTGCAGCTATTAGGCTGTCACTTCGGTGGACTAGGATTAGTGGAAAACTGTCCCCTCCCCTCATAAAATAGAACAGTTTACCTGCCCGTT GGTCTTCTTACTTTTCTCCTTACAGGTGCCTCTGCTCTGTGAGTAAGATGGTAGGAAAAGGGGCTGCTGTTGTTGAGCATCTTATTCATGTCTTCTCCAA ATGCTTGGATACTGAGGCAGTTGATAACAAGCAGCAAGTTGGGCGATCTCTCTTCTGTCTCGGGCTGCTGATTCGTTATGGCAACTGTTTATTAGCCAAC TCCAGCAATAAACTTATTGATGTTAAAAGGAGTCTCAGCTTGTTTATAAAGTATCTTTCTGTGGAGGATCTTGTTGTTAAGGTTAGATCGTTGCAGGCAC TAGGGTTTGTTCTAATTGCTAGGCCTGAGTTTATGTTGGAGCACGATATTGGAAAGATACTGGAGGGGGCATTAACTTCTACTGCTGACTATCGCCTTAA GATTCAAGCATTGCAAAACATGTTCGAGTATCTTCTTGATGCTGAAAGCAAAATGGAAGTAGATAAAGTTGATGATAATGTAGTTGATTACTCAGTTGGA GCTGGGCAGAGTGTACCTGTGGCTGCTGGTGCTGGGGATACAAACATTTGTGGGGGCATAGTTCAGCTGTATTGGAATAATATTTTAGGCACATGTTTGG ATTTCTATGAACAAGTTCGCCAATCAGCTCTGAAGGTCAGAGAACCTAGCTTCTATTTTGGATCAGTTTCAAAACTTTTATGCAAAATGATAAACAAGAA GTAAAACCTTATCTCTTAACTAAAAGCAGTTTGTTAACGGGAATACTCTTCTTTTCATTTGCTTAGATGATTGTTATTTTTGTGCTTCCAAATCTTCTGG ATTGATGGGGTGATGGAAAGATGATAAATTTGGTTGATGCTTTGCAAAAGATTTTAAAAGTGAATCTTACAGCCGTTATTTATTAGTCTCGTGAAAGTAG ATTGAATTATCTGCCTTTCTGACTACCTTATTCTTGTAAACTTAATCATTCCAATAAAAATAGCCAATTTTTCTTTTGCTCTTATTAGAATAGAAGTTAT GCTAATAATGCAGATTGTTGAAGTTGTGCTGCGCCAAGGTCTTGTTCATCCCATCACCTGTGTTCCATACCTCATAGCGCTTGAAACAGATCCTCTGGAG TCAAATGCGAAGTTGGCTCATCATCTTCTGATGAATATGAATGAGAAGTACCCAACATTTTTCGAAAGCCGCTTGGGTGATGGACTTCAAATGTCATTTA TGTTCATGCAAACCATCTGTCGTGCTACTGAAAATGTTAACAAGAAAATCCAATCCAAGAACCTTGTTTCTGGAAAAGGGAAATCTGAGACCAGCTCTCT CACTCAAGCAAGACTTGGGGTTTCCCGAATTTACAAGCTAATCCGAGGGAACAGGATATCAAGGAACAAGTTTATGTCCTCAATTGTGCGAAAATTTGAT AATCCAAACTGGAACAGATCATTAATAGCTTTCTTGATGTACTGCACAGAGGTCCTTGCATTGTTGCCGTTCACTTTACCCGATGAGCCACTTTATTTAA TCTATGCCATCAATCGAATAGTTCAAGTGCGGGCAGGGCCACTGGAAGCGAACTTTAAAGCCTGGAGTTCTAGCTTGTTACGGAGTGAGGGTCAGAGTAT GCATAATGAGAATGGAATACCTGACAAAGGCCCAGATGAGACAAGTCTTACAACTGGTCTAGCGATGTCAATGGACTTGAATGGAACATTTCAGTTGAAT CTAAATGCTCAGTCCAACTTCAATGACATGAGATCAGTTGATTTAAATGGAACAATTTACCAGCAGCCACATGATTCTTTATCTAATAACTGTAGCTCAG AAGCAAAGCTGCATGCTGGTTTGACAGATTCTTTTTCCATCTCAAAGGATGATCTGGAGAAAGTTCAGGCTGACTGTTTATCAGCATTTGCACTGCAGCT TCTTTTAAAGCTAAAGAGACACCTAAAAGTCGTGTATAGTCTCGATGATGCCCGATGTCAGGCTTTTTCTCCAACTGAACTGCCAAAACCTGGAGAGGTT GTCTCCAAACAGAATATCGCCTTCAATGTCGGTGAATTTCAATTCAGTTTGCCTACAACTCCACAAGAATTACTACAAAGATACCAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47008; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_101138
| Blastp | Sister chromatid cohesion protein SCC2 from Arabidopsis with 61.53% of identity |
|---|---|
| Blastx | Sister chromatid cohesion protein SCC2 from Arabidopsis with 61.7% of identity |
| Eggnog | Nipped-B homolog (Drosophila)(ENOG410XP32) |
| Kegg | Link to kegg annotations (AT5G15540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442738.1) |
| Pfam | HEAT repeat associated with sister chromatid cohesion (PF12765.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |