| Id Trinity | FTRINITY_DN54938_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_103592 |
| Sequence | AAAAATCTAGAATAATAATTAGTATCATGTTTTGTGCATATATTTCATTTACCATATTTTCATAGGGAAAGATATTAGATTTTGGAATAAAGTCAAAATC CTGTTTCAGCTTATGAAGTAAGAACCCTCACAATCCATTCTCTCTCACCATTCTTCAACTTTCATTCATTTTCTTCTTCCAAGATCACATTTTTCTTTGA CCCTTTTCCTCTTTACACCCAATTCCACCTTCAATTCAATTGCATGCTCCCGATTTTGTGTCGAACATTCTAGATCTTTCTGCCGGTGGTTAATCGGAGC AGATGTCGCCGTCAAATGGGGTTCAGTGCAACGGCGGCGGCGGCGGCAATGGGTTGAGTTATATTGAGCATCAAGTTTCAAAATTTGATACTCTTGCTGG TGTGGCCATTAAGTATGGTGTTGAGGTAGCTGACATCAAAAGGATGAATGTATTAGCCTCTGATCTTCAAATGTTTGCCCTGAAGACATTGAGAATTCCA TTACCTGGACGACATCCACCATCTCCTATTCCCGTTCTGCCTAATGGACATGCCAAGCAAGGAGACGATAGCTTTGAAAGGAAATTGCCACCGAGATGTA AAGCTGGCATGAAGGAACCTCTTCAGTCCTTAAGACTGAAAGCACTCGAAGAGGAGGTTTCTCCGGCTATGACCATTTTACAGAAATACTATGGACTCAA ATCTTCAAAGTCTAGAGATACATTTGAAGGAACAGAAATGAATGCTTATACATCTGCAAGTTCAGATCATTCCAAGTCAACAAATCTAGTCTATGATTTA CTGACTGGGAATGATGCAGTGCCTGAGTATATGTCTCCTCTTTCAGAAATTGGTGATGCAAGAGGTGAAAAGTATGATGACAAATCTGTCCGCAGACGTC AGAAAGCTGATTCTGATAGTGGAGGTGGTACACCTGAAAGGATTTTGAAAGAGGGAAATAATAGTGGTGGTTTGAATGGATTTTCTTCAACCGGAAAACC ATTATCCGGGAGGACAAAATCAGCAAGTCGAGCAGTGCTGTTTCCTGAATCAGAATCGGGATGGTTAGATTCTCTTGCAATGGGGTTGGGAGAATCTATA TTGACAGACGGGTTTTCCGGAGTGCGCAAATCATCAAGCGCGTCGAGCCTGAGAGAGCAGGAGAGGAACAATTCAGCAGCATCAGTGTGGCCACCGAGAT GGAGTTTGAAACCAGATTTGCAAGCAGCCATTGGGAAACCTATCTTTGATGGCTTACCTATCCCGATAACTTGCCGCAGGGGCAAAACTGCCCTTGATTA GTGCATCCCTTGGAGCAAATTATTCTTTTACACCACACATATAAATTGGAACTAGAAGCAACTCTTTTGGGCAAGTAAGCCTCACCAAAGAGTTCAAGAA AGAGAACGAAAGTAAATGGTTAGGATATTTATTCCAGACATAGAAGAACAACATATTCTACAACTGGTTTTTGTCAAATGTACCAATAATAGTCTCATTT GTTTATTAGGATAGTCTCCTTTGTTAAATGTTTAGCCCAGCAAGTTAAATTCATTCTGTTCAGTGCTTAATTGTCTCATGCCATTATTATGTTAAACATT GTGTATGTATTTAATTATTTATGACCTATTTTCATTTTCTGAGACCTTTTATACTGGAATACCATTGAATTTGTGCAACCATGTTTCAAGTTCATTTTTT GTACTGGTATTAAGTTTTGTATTACCCAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47110; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_103592
| Blastp | LysM and putative peptidoglycan-binding domain-containing protein 2 from Danio with 49.02% of identity |
|---|---|
| Blastx | LysM and putative peptidoglycan-binding domain-containing protein 2 from Silurana with 40.23% of identity |
| Eggnog | peptidoglycan-binding, domain containing 2(ENOG4111KU1) |
| Kegg | Link to kegg annotations (445113) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458859.1) |
| Pfam | LysM domain (PF01476.19) |
| Rfam | - |
| GO | - |