Id Trinity | FTRINITY_DN54943_c1_g1_i1 |
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Name Transcript | Ll_transcript_101654 |
Sequence | ATACATTGTCATCCCATAAAAATATCATAAAAATATTGCTATACACTTGTACAAAGTAACTAAAAGGAGAGAATATGTATGTAAGCTATGTTTGTCCGTA CCTAATTTGGATGAGATATTGTTTTTGTACTCCTCCGATGACATCGGTTCTGTGTACGAGGACAACATCATAAGACCCCTTTCAATTAACATCAAAGACC AATAAATGTTCTATTTCAATCACTATTACCCTTATTCATTTTCTCAATTCTAATCCCATCATTCTATTTTTGTTTCAATCTTCTCTCCCTCTCTCCCTTG CTTTCTTTGTTTCTTCTGCATGAGTTGATGGAGGAAATTGAACATGATAAAGCACCAATCTTGGAAGGAAGGTCCAGCCAGGAAATTGAGATACCTGTTA TCTCTGAGAGTCTTGACATTGTTCCGAAGACAATGGAATCATATTGCAATTCTGTTTGTGCCTTTTCCAGACAACAAAACAGTGCTGCAGCATCAAAAGA GTTAGCAAAGTCATCAAAAAAGCTTTCTGGAGTCATAGTTTTATATGTTATTGTCATGCTTGTGGAAGTTGTTGGTGGTATAAAAGCCAACAGCTTAGCT GTCATCAGCGATGCAGCACACTTGCTTTCTGATATTGCCGGATTCTTTATCTCTCTCTTTGCAGTATGGGCTTCGGGGTGGGAGGCAACACCTCATCAAT CTTTCGGCTACAACCGTCTTGAGGTTTTAGGCGCATTTTTGTCTTTGCAGTTAATTTGGGTGATATCTGGTTTTTTGATTTATGAAGCAATTGGTAGAAT TCTCCATCTAAATGACGAGGTGAATGGTATGCTCATGTTTGCAATTGCAGCATTTGGGTTTGTTCTTAACTTTATCATGGTTGTGTGGCTTGGTCATGAT CATTGTCATCATCATGGCTTTGGAGTCTCAGATCATAATCATAGTCATCATCATCATCATCATAGCTGTGGAGACTCGGATAGTGATCATGCTGACCATC ATTCCAGTGGACGCTCAAATCATGATCATGGTGAGCATCATTGCAGTGGAGACTCAAATCATGATCATGGTGAGCATCATTGCAGTGGACATTCAAATCA TGGTCATGGGAAGGAGGGAGTACCTAAAATAAATGATGAGGAGAAATTTGGCCTGCTTTCAAGTAATGAGAGTAATGTCTTGAACATAAATCTCCAAGGG GCTTATTTGCATGTCATGGTTGATATGATCCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTAAACCAGAATGGTTAGTGGTTGATCTTA TGTGCACTCTTATATTTTCTGTCATATCTTTGAGTACTACTGTGCCTATGCTTAGGAATATTTATGGCATTTTGATGGAGAGAACACCAAGTGAGATAAA TATCATTGATCTGGAAAAAGGGCTCAGAAGTATCAAAGGAGTGCAAGTTATTCATGACTTGCATGTTTGGTCCATAACAGCTGGAAAAAATGTTCTGTCT TGCCATGTAGTAGCTGAGTCTGGGATCAGTTCCATTGACTTACTTGCCAAGATTAAGGATTACTGCAAAAATACACATAAAATACAACATGTAACTATAC AAATTGAGTAAGATTAGATTGAATCTGACTCCTGTCCGGAGAGATAATTGGTTGATTATGCTCTTGGTTTTAAGGAAAGAAACGTCGTATTATTATAGTT AAGGGGTAAAAATGACATATCACATTGGTTTTATCATTTGCTTTTGATGTACTTCATGGGGAGGATCCTTACCTGATTAGATTTCCCCTCACACTATTTT ACTCCTTATTAGTTATTAGAGGTGTATCTTATGTGTTTTATTTTCCCCATTCTTGCATGAAACAAATGTATACATGAGAACTAGCATATCAGTCTGATAT GTAAGGGAGGCATTAAAAATTGAACATAGCACAATGTTGTAGAAATAAAGTTCTATTTTAAATTAATGAAATTTTTGTGGTTGTTCAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_47160; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_101654
Blastp | Metal tolerance protein 1 from Arabidopsis with 48.7% of identity |
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Blastx | Metal tolerance protein 1 from Arabidopsis with 49.42% of identity |
Eggnog | cation diffusion facilitator family transporter(COG1230) |
Kegg | Link to kegg annotations (AT2G46800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449727.1) |
Pfam | Cation efflux family (PF01545.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |