| Id Trinity | FTRINITY_DN54949_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_102968 |
| Sequence | GGGAAAAGAGGTTAGGACGTCGTTCAAACATATCGTGGTGGTTCATAAGCAACGAAAGAGGGTTGAGGTCCCTAAACCCTGAGAGGTTAGCAATAGAGTG AAGAGACAATGAGAATCTCGTTGGACGATTCAAACTACTCAGACCCAACTCACTCTCCTCTCACTCCTAACACTGACCAACTCCAATGGCTCCCTCTTCC CCAACACCCTCTCTTCACCTCCACCACACTCCCCACCGCCTCCTCCGCCACCAAAAACCTCTTCGCCTGGGACGGCGCCTCCCGTCTCTATTTCTGGGAT TCCGTCAATACCTGCCTCCACCGCCTCTCTCTCCGCCTCGGCGACCCCGATCCTACTTCCGTCCTCGCCGCTTCTCCCTCTAAGGTATTGCAAATTGATA CGGAGCTCAACTTCGATGTTCAGAAAATCTCTATTAACAGAAACGGAACTGCTATGCTTCTTTTCGGATCTGAACGGCTCTGCGTAATGTATCTATATGG ACGCGCTTCCAAAACCGACGTCAATTTGATTTGCAGGACTATAACTGTTGGTTCAAATGCTTATTCCAACGGAAGCAATGATATTCGTGTCTTACAAGCG CTATGGCACCCCTCTAGTGATACTCATTTGGGAATCCTTTCCTCCGACTCTGTTTTCCGGCTTTTCAATCTGGCTGTGGATCCTTTGCAACCAGAGCAAG AGTATTATTTACAGCCCGTGGAGTCAGGTAGATCCAGGAATGCCTCGTCAGTGTGCCCAGTTGATTTTTCTTTTGGGGATAACCACTTATGGGACAAGTT TAGTGTTTTTATTTTGTTCAGCGATGGGGCTATCTATGTACTTTGCCCAGTTGTTCCATTTGGAAGTCTCTTCAAATACGAGTCTCTATTGGAAATATAC AATGATGCTCAGACATTTGGGCTAAAATCAACCAACTCTGTAGCAGCTAGTAATTCAAAATTGGCAATCTCTTGGTTAGAAGCAACATTTCCTGAGTTAA AGAATGTAGAAACTCAAGGAGACAGCCTGTCTTTGTTCAGAGCTCATGCTTATGCTTTATTCGATTCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGT AGGTCAAGGTGGAAGTGAAGATTCAGTTGGCCGTAGTGCAGAATGTGAAGGTCGTGCAATTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCTATTTTG GTGACTGCCTGGAGTGGTGGGCAATTACAGATTGATGCTCTAGCAGATGAGATCCAACCTCTCTGGAGTGTTGGTAGCCCCCCTCGTCTTCGTGTTGATT ATCTTGACCAAATTCTTGGTCTTGCTATGATTTGTGAGTCAATTTCCAGCAGCTCTCTGGAGGATCTTGATCATAATGCTTGGTTGGGTAATCCACCCCC GCTTTTGAGACTGGCTATTGTTGATTTGGCTTTGCCACGACGAGCAGAAAGTGGTTATAATATTTCATTATTTATTGATAACCTTATGCCAGAAAGAATA TATTCCCTTCATGATGGAGGGATTGATTCAATAGTGTTGCATTTTCTTCCATTTACAAGTCAGACAAATGGCAAGGATGATACACTGAGACCACCTTCTG TGCATCCTGTTCTAAATACATGCCAGAGTGGATCCACCTCAGAGCCTTCACTTTGTGGTTTTGTCTCATTGTCAGATTCATTTGGATATTCGTGGATTTT GGCTGTTACTCTTTCTCAAGAGTGTGTTGTGCTTGAGATGAAAACTTGGAACCTCTTGCTTCCAGTGAGTATTGATATGGAAAAGAAACCCATTCAATCA GAAGGTGAATCAAAAGAGAGAGAAATGTCAACTATAATTAGCAAAGAACTACTTAGTGGCCCAAAGGAGGTACTTATTCCTCAGGCTCCAAGTTTGCGTT CTGTTGCAGCTGATTCAATTGAAGGCCGATCAACATTACACCAGTATTTCAAGTTATTTCATGAAACTTACGTAGAGTATGCACATAAGGTGTACCTGGA GCTCAAGCATCATGCACCCCAGTTGACGAAAATCATTAATGACCAACATTCTCGTTTAGGCGGTGCACAGCAAAAGCTTTTGAAAGTTGAGGAGAAAGAG TCTATATTACAGAAAAGGATAGATCATGCAATTGAAATGCACAATTCTTTGGAAGAGCGATTGCAACAATTAAGGAACTTACCTTGTGCTCACAAAAAAC CACTGTCAAAAGCAGAGCGACAATACAAGTCTGAGCTTGACCACTTCAAGGAAGTTGAGTTGGATGCTCTGCATTCTTCTGTTGACGCGCTAAGTGCAAG GCTGAGAAGGCACATTCAAGCATCAAAAGCTAGTCACCAACAACAAAAAGTACCAGGCAAGAAAATTTGTGCTGCAGATAATCAGATATCCTTGCTCAAG TCATCACTTGAAAAGCTTTCACTTTTAAATAGTGAAAATACAAAAAAAGTTAAGCTTGTAGAGTCTTCATTGAAAAACAAAGAAGTAAGCATCAGAGAAT CAAGCTTGCCTACAGTTTAAAACTTTCCTAGAGTATTTAATTTTTGTAGCAGGGCAGTGATGGCTTTGAATTAAGCTCCTACTGTTTGCACTCCCACAAA TTTAGTCATCTCAATATGTCCCACACTAATTTTTTGGGATTTCATAAATGAAGATGCAACTTTATGTGCCAGTGACTAAAAGGAAAACGATGGAATGTTT GTATGTTGTACCTGAGTCCCTTTTCAATATGGCAAGTATCGTAGAAGAAATATCAGGTATTTATTCTATTTTTTTATAGGGATTGTACTGCAAATGGGTG AAATGGTCAACAATAACCTCAACTCTACCGTGTAGATACTATTTTCAAGATTTAAACTCGTGTTATGGTGGTCATTAAACATTAACCTTTATGTCAAGCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47213; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102968
| Blastp | Nuclear pore complex protein NUP88 from Arabidopsis with 57.49% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP88 from Arabidopsis with 59.76% of identity |
| Eggnog | Nucleoporin 88kDa(ENOG410YC30) |
| Kegg | Link to kegg annotations (AT5G05680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439391.1) |
| Pfam | Nuclear pore component (PF10168.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |