| Id Trinity | FTRINITY_DN54954_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_102906 |
| Sequence | CTGAAGTTTTCGGAAAAGAGAAGTTATATTTCGTTATGGTCAGTTTGCAAGTTGAGTTTTGGAAATGACATGAAATACATTTGTGAGATCACTCTGAAGT CTTTTATTTCCCTCGGAAAATCATCTCGCAAATGGACTCTTAGTGTTTGTTTGGCAAGGTGAGTCCTACGGGAGTTTACGGGCAAATCTATAGCTTATTT GACCCAAAATAAGTTCTGAGCTCTTTAATTGAGGGAGGGTTACTATAAATACTGATATTATAAATCAATTTTTAGTGGCTAAGGGCACTGTTTGGTACAA CTTGCTGGTAAGTTAGATGAAAGCTTATAAGTTAGGAGTGAAAGTTTAGGAGTTGATTAGCTAGCTGTTTGAATCAGTTTCTTAACTTTAACCGATAAGC TATGCCTGCGGTAGCTGATATGCGTAAAACGGAATGTGCCTTGAGCTTATAAGCTCATAAGTTATCTTAATTAGCTTATCAAACAGGAGCTTATAAGCTT ATTGAAATAAGCCCCCTTGCCTAACCTTAACAAGTTCCTTAGTTTTGGTCTAACAAGCTAGTTATTTGCCTAGCTTATAAACTCATTGTTGGCTTTACCT AATACAAAACTTGACCGATAAGTCAAGAGCTTTCAACCTTTCACGTTTCAGACTTTTCTGCCTTCAGCTAACTTTTTAGTTTGTTTCACTGATCAGAGTC CTAGTTTAACTTTGATACATCGTTAGTGTAACACTATCAACCTATCATATATTGTCTAGTTGTGGCAATAAATAATTGGACAACTCTGCAAAACACTTTT ACATTGATATGATTTCATTATTCAAGAGTCATTACGCATTCTTTGGCTGTACCTAAACATTTGAGAATTTTTTGTTCACTATTTGAAGAAATCAAAACCA AGACTAACAAGAATAATAAAATTATTGTTTATGAAGATGGGGTAATATTTTGGTAACTACACTCATTATTTTGACCTCATTTTCAACCTTATGGTGTATG AAGATGAAGTAATATTTTTTTGGCATTTTCTGAATGTTTGATAACTTTTTTACTCATTGAAGAAATCAGAACAAAAAATAATTAGAAATATATCAGATAG TTTTGCTCAATATTTTCTGTTTTTTCGTTAAAAGGGTTCTTGCTTCACTTGACGGTGATGTGAGGCTATGAGGAGGGACACTTTACAGATGCTTTTAGAC GCTTCTAATTATATTTTATAACTTCTTACATTTACTTTTTAGATTGTATATTATTATATATGAAAATGCCACTGTTGTTATATAAATGTTAGCATTTTTA ATGTTTACAATACTCATGCTAACTTTTGGAAAAAATATTCCTCTCTTTTAATTTAGTATTTATGTTTTTGTGTTAACTTCATATAAATTTTGTATCTTGT ATCATGGCCATGTCGTGTTCTATAATTTTTAAAATTTGCCATATTCCCGTGTATGTGTCATGTCATATCTGTATACCATGTTGTATCCGTGCTTCCTATA TGGGAGGGTTTTAATTTAATGATAACGACTAGTAGCAGTAAGAACAAAAGGAACTGTGGGGTTCAGTGTTTCAATCTTTTACCAAAGGTATGCCCCAAGT AACTACATAAATCAAAATAGTTAAGTTTTGACTTTTGATGATTTGTCTTGTGGCAGAAGGATAGGCTTGAGATTGATTATTTATCAGTTGTAATGCTCCT ACTCATTGTTGCTCATAGTTGATTATTTTGGAATTCTAAATCATCCGATGAATTGGCGTGTGAACTTTTTTCGTTGTTTGACAGAACGATTTAAAGTTCT TTCCTATAATATATTGGCTGATTACCTTGCTTGGGACCACCGGAGAGCACTTTACTTTCACATACCCCAACACATGTTGGACTGGCAATGGAGAAAGAGA AGTATACTTTTTGAGCTTGGATGGTGGTCTGCTGATATCATGTGTTTTCAGGAGGTTGATAGATTTCATGACTTGGCAGAGGAGTTGAAGCTAAAGGGAT ACACTGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGCTGTGCAATCTTTTGGCAGATATCGAGGTTCAAGTTGTTATATGAAGAATCCATTGA GTTTAATAAGCTGGGACTTAGGGATAATGTTGCTCAAATATGCGTACTAGAGTTCATTAATCAAAATGGATCGGTTCCATCCAGCGTGACAGGTTACAGT AAAATTGTGGTTTGTAACATTCATGTGCTTTACAATCCAAAAAGAGGAGAAATTAAACTTGGCCAGGTCAGAGTGCTACTCGAGAGGGCTAACGCTGTTT CTAAACTCTGGAATAATGCCCCTGTTGTTATCTGTGGGGACTTTAACTGTACCCCTAAGAGTCCACTGTACAACTTTATCTCTGAACAGGAGTTAGATTT GTCTGGAATAGAAAGGGATAAGTTATCAGGACAGGCTTCTGCTAAAATTCGTTCACCACCAAGGCTTGAAAGATTTTCTGGTGGTTCAGCTCAGAACGTA TCTATTGAAGGTGACAAGGAAGTTAATGCAGAACAAAATAATTCTTACATGCAGAATCCTGGCACTAAGTGTAATAGTTCAGAGAATCAATATGCTCGCA CTGTTCTGGATATGTCTAAATTGTCTGTGACAAATGTGCAGCATGGAAAGGAGAATGTCGCATATGCAGGAACGGATACTCAGGAGCCTGCTATTGAACA TTCTAAGAGTTTTGGTGAAGTTGGTAGCATAAAAGAAGAGCAAAATTCTTCTTATGGTGAAGTTAGGCTCCCTGTTGATAGTATAAATGCTGAGATTCAT GATGTCACAGTTAGTACCTCTTCAGATACTGTCGCAGCTTTAAATCAAGAATCATTAAGCAAAGAATCCAACCTACATGTCCCTGAAGGAAATAAACATA TGGAGATTAATTTCCCCCCAACCTCTCTCCAAGAAGACAACCAATCTTCCAAGGTCAAGATAGGTCTTGAGTCAACAGATCTTCTCAATTTAGAAATCTC TATAGCTAAACCATCCAGCGAGACTTCAGTTTCCGATGCTTCTGAAGTCCTCCATCAAGGGTATAGAGAAAGCCAATCTCATGAACTCGATGTTAATGAC CAAAGGAACAGCCCATCAGCCTTAGATCTTGTTGGCAAATCACATCAATCCACCAACATTGACTTTCCACTAGATGAAAAGCTAGATAAAGCCATAATAG GCAGCGAAAATACTGGCAAAGATGACAACGCTTTCATATCTTCCTTACATAATGCCAAAGAAGGCGTAACTCTTGATCTTGGTCCATCAATTAAATCAGA TTCTGCCTCCAACAATTTGTTGCTGGCTGAAGAAATCAATGAAGTGGAGGATGACTTATCTCCTAGTCCCAGTTCCAAATCAATTGATGCAGAGTACACT CCTTATAATCCATCATTGTGGACCCCTATGGAGATAGAAACTGCAACAGGAAATGTAGACTGTACCTTCTTGGAGCACCAGTTATCGCTTAGGAGCACAT ATACTGAAGCCATGGATTGTTCAGGGACTAGAGACCCCCATGGGGAGCCCCTAGTGACCAGTTATAATAGGAGCTTCTTTGGAACTGTTGACTACATTTG GCGATCTGAAGGTTTGCAAACAACTCGAGTTCTCGCTCCGATACCTAAACATGCCATGGATTGGACTCCAGGATTCCCAACAAAGAAATGGGGCAGTGAT CATATTGCTCTTGTTTCTGAGTTGGCAATATTGAAAGATGGCATATAGACATGAAGAAGGAGGATGTTAAATAGCAGCACTGTATTTGACATCTTAAAAT CATAACATGTGGTGCCAAGCAATGAAAGAGGGAGACACTTCAAAATGGTTAGTGTTTCTGCATCCAAATATTGCAATAATTAGAATAATAGGATTTGGAT TTGTATTTTGTTCACAATGGTTTGTGCCAACTTTTAAAACATATATCTATTTAAATTTAAGATTTATGATTTATAATAAATTTATATATGCTGTATCTGG TTTCTTAGATGGGTGAGGGTAGAGTATTTGGTAGACTTCAGAAACTGGATGGAACAATTGTTTAGTCTATTTTATCTACAATTGAACATGACAATGTGAA CATCTTACATTCATTAATCTCTATCCAATGTTTTTTTGACATTTTAAGTTTTTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47243; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102906
| Blastp | Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 62.03% of identity |
|---|---|
| Blastx | Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 62.03% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5239) |
| Kegg | Link to kegg annotations (AT5G11350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457883.1) |
| Pfam | Endonuclease/Exonuclease/phosphatase family (PF03372.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |