Ll_transcript_102907

• Id Trinity: FTRINITY_DN54954_c3_g1_i3
• Name Transcript: Ll_transcript_102907
• Sequence: AAATTGTGAACCTAATTCATGCATTCAACATAATCCTATAATTTCAACATCATATTTGAACTATGGTAGACACAAATGATTCTTCTGGTATCATTTCTGT ATAACTTAGAATATTACTTCATATTATAGGAATTAATCCTTTTGAAAATTCATGACTTTATCACCCCTATCAGGTATTTCGAAGAATCGATTTTTTTTAC TATAAGCCGACCTCGCCCGTGGTTCCGAAATACAATATGGGCTTGCCCGAACCGGTTCGTTGCTGCTTGTTTCGTTGATCCGTTATGCAGTAGCTCCTCT TTTGTGAAAGTGGCACCCGTCACGTGACTGAGTGAGCGTGCAAAAACGCGCCACCTCACTAACTCACACCCCTTCGTTTCTCCTTTCCCTACAACAATGA GACGCACTCCTCCGCCGCCAATCCACTTCCTCACCACCGCCGTCACCGACAACTCCGCCGCTACTGCCACCTCCTCCATCATGTCTTCTTATCCACGTCA ACGAGGACGCGGTGGAAGATTCTCCGGCCGTTCATTTTCCAGCGGCAGAGGCCAATTCGTCACCGGAGATTCTCACTTCCGCTCGGTCCGCGACGATAAT TTAGGTCACCGGCGAGGCGAGAGAGGAAACTTCGTCAATCAAACGCAACCTTATCAACAAAACTCTCAGACTTTTTATCCGAGGCCTCAACCACCACTGC CGCCGCCGCCGCCTTATCAACAAAACTCTCAGTTCCGTCATCCTTATCCACCGCATCGTCCGCCTCCGGCGATTGGTCAGCAATTCCGTCCTCGACAAAA GGCGCCGGATCATAGAGAGTGGGAGGCTGCAAAGACGCCACCACCTCCTCCTCATTGTGAACGATTTAAAGTTCTTTCCTATAATATATTGGCTGATTAC CTTGCTTGGGACCACCGGAGAGCACTTTACTTTCACATACCCCAACACATGTTGGACTGGCAATGGAGAAAGAGAAGTATACTTTTTGAGCTTGGATGGT GGTCTGCTGATATCATGTGTTTTCAGGAGGTTGATAGATTTCATGACTTGGCAGAGGAGTTGAAGCTAAAGGGATACACTGGCATCTGGAAGATGCGTAC GGGCAATCCAGTTGATGGCTGTGCAATCTTTTGGCAGATATCGAGGTTCAAGTTGTTATATGAAGAATCCATTGAGTTTAATAAGCTGGGACTTAGGGAT AATGTTGCTCAAATATGCGTACTAGAGTTCATTAATCAAAATGGATCGGTTCCATCCAGCGTGACAGGTTACAGTAAAATTGTGGTTTGTAACATTCATG TGCTTTACAATCCAAAAAGAGGAGAAATTAAACTTGGCCAGGTCAGAGTGCTACTCGAGAGGGCTAACGCTGTTTCTAAACTCTGGAATAATGCCCCTGT TGTTATCTGTGGGGACTTTAACTGTACCCCTAAGAGTCCACTGTACAACTTTATCTCTGAACAGGAGTTAGATTTGTCTGGAATAGAAAGGGATAAGTTA TCAGGACAGGCTTCTGCTAAAATTCGTTCACCACCAAGGCTTGAAAGATTTTCTGGTGGTTCAGCTCAGAACGTATCTATTGAAGGTGACAAGGAAGTTA ATGCAGAACAAAATAATTCTTACATGCAGAATCCTGGCACTAAGTGTAATAGTTCAGAGAATCAATATGCTCGCACTGTTCTGGATATGTCTAAATTGTC TGTGACAAATGTGCAGCATGGAAAGGAGAATGTCGCATATGCAGGAACGGATACTCAGGAGCCTGCTATTGAACATTCTAAGAGTTTTGGTGAAGTTGGT AGCATAAAAGAAGAGCAAAATTCTTCTTATGGTGAAGTTAGGCTCCCTGTTGATAGTATAAATGCTGAGATTCATGATGTCACAGTTAGTACCTCTTCAG ATACTGTCGCAGCTTTAAATCAAGAATCATTAAGCAAAGAATCCAACCTACATGTCCCTGAAGGAAATAAACATATGGAGATTAATTTCCCCCCAACCTC TCTCCAAGAAGACAACCAATCTTCCAAGGTCAAGATAGGTCTTGAGTCAACAGATCTTCTCAATTTAGAAATCTCTATAGCTAAACCATCCAGCGAGACT TCAGTTTCCGATGCTTCTGAAGTCCTCCATCAAGGGTATAGAGAAAGCCAATCTCATGAACTCGATGTTAATGACCAAAGGAACAGCCCATCAGCCTTAG ATCTTGTTGGCAAATCACATCAATCCACCAACATTGACTTTCCACTAGATGAAAAGCTAGATAAAGCCATAATAGGCAGCGAAAATACTGGCAAAGATGA CAACGCTTTCATATCTTCCTTACATAATGCCAAAGAAGGCGTAACTCTTGATCTTGGTCCATCAATTAAATCAGATTCTGCCTCCAACAATTTGTTGCTG GCTGAAGAAATCAATGAAGTGGAGGATGACTTATCTCCTAGTCCCAGTTCCAAATCAATTGATGCAGAGTACACTCCTTATAATCCATCATTGTGGACCC CTATGGAGATAGAAACTGCAACAGGAAATGTAGACTGTACCTTCTTGGAGCACCAGTTATCGCTTAGGAGCACATATACTGAAGCCATGGATTGTTCAGG GACTAGAGACCCCCATGGGGAGCCCCTAGTGACCAGTTATAATAGGAGCTTCTTTGGAACTGTTGACTACATTTGGCGATCTGAAGGTTTGCAAACAACT CGAGTTCTCGCTCCGATACCTAAACATGCCATGGATTGGACTCCAGGATTCCCAACAAAGAAATGGGGCAGTGATCATATTGCTCTTGTTTCTGAGTTGG CAATATTGAAAGATGGCATATAGACATGAAGAAGGAGGATGTTAAATAGCAGCACTGTATTTGACATCTTAAAATCATAACATGTGGTGCCAAGCAATGA AAGAGGGAGACACTTCAAAATGGTTAGTGTTTCTGCATCCAAATATTGCAATAATTAGAATAATAGGATTTGGATTTGTATTTTGTTCACAATGGTTTGT GCCAACTTTTAAAACATATATCTATTTAAATTTAAGATTTATGATTTATAATAAATTTATATATGCTGTATCTGGTTTCTTAGATGGGTGAGGGTAGAGT ATTTGGTAGACTTCAGAAACTGGATGGAACAATTGTTTAGTCTATTTTATCTACAATTGAACATGACAATGTGAACATCTTACATTCATTAATCTCTATC CAATGTTTTTTTGACATTTTAAGTTTTTAG
• Tissue: flowers
• Gene name: LI_gene_47243;
• Additional information: details;

Expression of Ll_transcript_102907

FPKM

• FPAB: 4.1
• FPNAB: 5.8
• LF1: 5
• LF2: 4.6
• LF3: 5
• LF4: 4.7
• UF1: 4.1
• UF2: 5
• UF3: 5.5
• UF4: 4.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_102907

• Blastp: Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 54.93% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 54.17% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT5G11350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457883.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;