Ll_transcript_102908

• Id Trinity: FTRINITY_DN54954_c3_g1_i4
• Name Transcript: Ll_transcript_102908
• Sequence: AAATTGTGAACCTAATTCATGCATTCAACATAATCCTATAATTTCAACATCATATTTGAACTATGGTAGACACAAATGATTCTTCTGGTATCATTTCTGT ATAACTTAGAATATTACTTCATATTATAGGAATTAATCCTTTTGAAAATTCATGACTTTATCACCCCTATCAGGTATTTCGAAGAATCGATTTTTTTTAC TATAAGCCGACCTCGCCCGTGGTTCCGAAATACAATATGGGCTTGCCCGAACCGGTTCGTTGCTGCTTGTTTCGTTGATCCGTTATGCAGTAGCTCCTCT TTTGTGAAAGTGGCACCCGTCACGTGACTGAGTGAGCGTGCAAAAACGCGCCACCTCACTAACTCACACCCCTTCGTTTCTCCTTTCCCTACAACAATGA GACGCACTCCTCCGCCGCCAATCCACTTCCTCACCACCGCCGTCACCGACAACTCCGCCGCTACTGCCACCTCCTCCATCATGTCTTCTTATCCACGTCA ACGAGGACGCGGTGGAAGATTCTCCGGCCGTTCATTTTCCAGCGGCAGAGGCCAATTCGTCACCGGAGATTCTCACTTCCGCTCGGTCCGCGACGATAAT TTAGGTCACCGGCGAGGCGAGAGAGGAAACTTCGTCAATCAAACGCAACCTTATCAACAAAACTCTCAGACTTTTTATCCGAGGCCTCAACCACCACTGC CGCCGCCGCCGCCTTATCAACAAAACTCTCAGTTCCGTCATCCTTATCCACCGCATCGTCCGCCTCCGGCGATTGGTCAGCAATTCCGTCCTCGACAAAA GGCGCCGGATCATAGAGAGTGGGAGGCTGCAAAGACGCCACCACCTCCTCCTCATTGTGAACGATTTAAAGTTCTTTCCTATAATATATTGGCTGATTAC CTTGCTTGGGACCACCGGAGAGCACTTTACTTTCACATACCCCAACACATGTTGGACTGGCAATGGAGAAAGAGAAGTATACTTTTTGAGCTTGGATGGT GGTCTGCTGATATCATGTGTTTTCAGGAGGTTGATAGATTTCATGACTTGGCAGAGGAGTTGAAGCTAAAGGGATACACTGGCATCTGGAAGATGCGTAC GGGCAATCCAGTTGATGGCTGTGCAATCTTTTGGCAGATATCGAGGTTCTGTACAGCTCTACTTTGTTCTAGATGCTACTTGCTATTTATCAAAATTGGG TTTATTTTCTTCACCAGTGATTAAACATTGACTGCATTCATGCACATCAAATGGCTTGTGGAAATTTCTATAACCTACACCTTTTTCATTAGGAGTGTGA ATGACTTGACTCAAGTCAAGCACACTTGAAGCTCAGACTTGGCTTGTGAGTAAAAAGGGGAGTTTAAAGCTTGAGCTTGACTTGATTAAAAATATGATGT TTTTAGCTTGGCTCATTTAAAGCTTCGTTGTTTTTTCCTTTATCAAATTTCTCACTGAATTATTTTTAAGTCTTTAAATTTAACATTTAACTAATATCTT TATACTAATATATGAATAAAATAGAAAAATAGAATTTTATATTCATAGATTATAATACATTATGACTCTGGTAATACACATGAGCTATCCGTGAGCTCTT TTTTGTTATACTTCCTTTCCTGTTTAGCCTTGTTTTTTTATGCTTATTTGGCATTATATATATAAGCTGCATATAGGTCTCTGAAGTCGACATACACTCA TACTTGTCTGTGGGTGAATTCCAATTCAATTTGCATCTCGAATTCAATGTCTTTCAGTCAGCTATATTTGTGAGCAGAAAGAGTAAGAGAGGGGACCACG TGTCCTGTCCTAATGCTAAAACCAGGATAGATTTTATTTTAATTTTATTCGTTTAATAATCTCATTTATCTGACTTATCATAGGTTCAAGTTGTTATATG AAGAATCCATTGAGTTTAATAAGCTGGGACTTAGGGATAATGTTGCTCAAATATGCGTACTAGAGTTCATTAATCAAAATGGATCGGTTCCATCCAGCGT GACAGGTTACAGTAAAATTGTGGTTTGTAACATTCATGTGCTTTACAATCCAAAAAGAGGAGAAATTAAACTTGGCCAGGTCAGAGTGCTACTCGAGAGG GCTAACGCTGTTTCTAAACTCTGGAATAATGCCCCTGTTGTTATCTGTGGGGACTTTAACTGTACCCCTAAGAGTCCACTGTACAACTTTATCTCTGAAC AGGAGTTAGATTTGTCTGGAATAGAAAGGGATAAGTTATCAGGACAGGCTTCTGCTAAAATTCGTTCACCACCAAGGCTTGAAAGATTTTCTGGTGGTTC AGCTCAGAACGTATCTATTGAAGGTGACAAGGAAGTTAATGCAGAACAAAATAATTCTTACATGCAGAATCCTGGCACTAAGTGTAATAGTTCAGAGAAT CAATATGCTCGCACTGTTCTGGATATGTCTAAATTGTCTGTGACAAATGTGCAGCATGGAAAGGAGAATGTCGCATATGCAGGAACGGATACTCAGGAGC CTGCTATTGAACATTCTAAGAGTTTTGGTGAAGTTGGTAGCATAAAAGAAGAGCAAAATTCTTCTTATGGTGAAGTTAGGCTCCCTGTTGATAGTATAAA TGCTGAGATTCATGATGTCACAGTTAGTACCTCTTCAGATACTGTCGCAGCTTTAAATCAAGAATCATTAAGCAAAGAATCCAACCTACATGTCCCTGAA GGAAATAAACATATGGAGATTAATTTCCCCCCAACCTCTCTCCAAGAAGACAACCAATCTTCCAAGGTCAAGATAGGTCTTGAGTCAACAGATCTTCTCA ATTTAGAAATCTCTATAGCTAAACCATCCAGCGAGACTTCAGTTTCCGATGCTTCTGAAGTCCTCCATCAAGGGTATAGAGAAAGCCAATCTCATGAACT CGATGTTAATGACCAAAGGAACAGCCCATCAGCCTTAGATCTTGTTGGCAAATCACATCAATCCACCAACATTGACTTTCCACTAGATGAAAAGCTAGAT AAAGCCATAATAGGCAGCGAAAATACTGGCAAAGATGACAACGCTTTCATATCTTCCTTACATAATGCCAAAGAAGGCGTAACTCTTGATCTTGGTCCAT CAATTAAATCAGATTCTGCCTCCAACAATTTGTTGCTGGCTGAAGAAATCAATGAAGTGGAGGATGACTTATCTCCTAGTCCCAGTTCCAAATCAATTGA TGCAGAGTACACTCCTTATAATCCATCATTGTGGACCCCTATGGAGATAGAAACTGCAACAGGAAATGTAGACTGTACCTTCTTGGAGCACCAGTTATCG CTTAGGAGCACATATACTGAAGCCATGGATTGTTCAGGGACTAGAGACCCCCATGGGGAGCCCCTAGTGACCAGTTATAATAGGAGCTTCTTTGGAACTG TTGACTACATTTGGCGATCTGAAGGTTTGCAAACAACTCGAGTTCTCGCTCCGATACCTAAACATGCCATGGATTGGACTCCAGGATTCCCAACAAAGAA ATGGGGCAGTGATCATATTGCTCTTGTTTCTGAGTTGGCAATATTGAAAGATGGCATATAGACATGAAGAAGGAGGATGTTAAATAGCAGCACTGTATTT GACATCTTAAAATCATAACATGTGGTGCCAAGCAATGAAAGAGGGAGACACTTCAAAATGGTTAGTGTTTCTGCATCCAAATATTGCAATAATTAGAATA ATAGGATTTGGATTTGTATTTTGTTCACAATGGTTTGTGCCAACTTTTAAAACATATATCTATTTAAATTTAAGATTTATGATTTATAATAAATTTATAT ATGCTGTATCTGGTTTCTTAGATGGGTGAGGGTAGAGTATTTGGTAGACTTCAGAAACTGGATGGAACAATTGTTTAGTCTATTTTATCTACAATTGAAC ATGACAATGTGAACATCTTACATTCATTAATCTCTATCCAATGTTTTTTTGACATTTTAAGTTTTTAG
• Tissue: flowers
• Gene name: LI_gene_47243;
• Additional information: details;

Expression of Ll_transcript_102908

FPKM

• FPAB: 0.1
• FPNAB: 0.4
• LF1: 0.5
• LF2: 0.3
• LF3: 0.2
• LF4: 0.2
• UF1: 0.2
• UF2: 0.3
• UF3: 0.5
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_102908

• Blastp: Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 50% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 56.25% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT5G11350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457883.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;