Ll_transcript_103504

Id TrinityFTRINITY_DN54964_c2_g2_i12
Name TranscriptLl_transcript_103504
SequenceCTTATGAATAAGGTTGAAGAAACAATGCAAATTATTATTAATAAGAATAGTATTATAAAGGAGAGGATATGCAGTAATAATAGTGTGGGATGGAGTGATG AGTGGGAAATAAGAACAAACAGTTGGTAGGCACTAGGCAGGAAGGAAATACTAGAGAGAGCAAATAGCCTTGAGCCTGTTGGCGGCAGATTGATCTATGG AATACTGCAGGAATCAAAATTGAAGAATGGATTAGATATTATTTAGATAGAGAATGGATGAATTAGACATTATGAATGAATAGGAATGAATGAATGAATG AATGAATGAATGAATGAATGAATGAGAATGATAATACCTTGTTGAGAACCCAGAGTGAATGATGGTAGGTGCGTTGGAAGAGTTCATGAAGAGTAGAAGA ATCAACATGACGGTAGTTGACGAAGTTTTCACGAACATACTTCGCATAATAACCTCTTGTTTCCTTTGGTAAATGCCTCACCAGACGGAGTACCTCTGCA TAAGCTCTCACCGCCTTCGACATTTCTACAAAACCCTACAACTAACATCCAATTCATCATTTTCTACAATTTCTATTGGGCTTTTTGGGCCCTAACCTTT ATTCATTTCATTTCAATTTCAAAAATTCCAAAATATCTTAACAAATATTTCATTGTTTTGTTTTGTTTGAAGAAGCAAGTCGAAGAAATGAGTTTAGATT CCTCTCGCTCACCAAATCCTTCTTCTAAAAGAACTTTCTCTGATTTTAATCCTGCTTCTTCCTCATTTAATAATAATAATAATAAGAAGAGGAAGAAGAC GATAAAGGCGAAAACCCTAGACGTCGTTTGGGGCTCTAATTCCCATATTGGCAGTTATATGGCAGACAAGAATCGTAAACTGCAGAACCAATTTCACACT GAAGCTGCTGCTGCTGCTGCTGCTTCCACATCCTCTATCTTCTCTGGAGTTTCCATTTTTGTTGATGGTTTCACCGTTCCTTCCACCCAGGAGCTGCGAA ATTACATGTTAAAGTATGGTGGCAGATTTGAAAACTATTTCTCAAGACATCATGTAACTCATATCATCTGCACTAATCTTCCTCACACTAAACTTAAGAA CCTCAGAGCCTTCAGCGCAGGCCTGCCTGTCGTCAAACCCACTTGGATTTTAGACTCAGTTGCAGCTAATAGACTCTTGAGCTGGGTGCCTTACCAACTT GACCAGCTTGTTAATAACCAGCCAAAACTGTCGTCCTTCTTCACATTGAAAAGTCACAAAATGTCAGAGGATGCTTGTACAAATGCGCTTTCTCAAGCAG TACCAGATGTTGAAGATTTGTCTCTCAGGGTTGGGCAATCAAAGGATACATACTCATCTGAAGTTGGGGAGGTGGTTGAACTTAGCAGGCAACTCAGGTT CAGTTCTGAATCTGATGATATTCTCACAGAGAATAATAATGCAATTACAATGGAAGAGCCTACCACTGTTAGAGTTAGATGTGATGAAGAAGGGATAGCA GAAGGAAGCAATGCTGACACTGGAGATGAGAGAAACGTCCAAGGTGAACTTGACCTTAATCATCAAGAATATTGTATGTCAGTTACTACTCCCTGCTCAG AATCCTCACCTGACCAGAATGTAAAAGAATTGCCAAGTTCTGAAATCTCTAGGCCTTCTAAGCATTTTCATTCAACTCTGGCAGACCCTAATTTTGTGGA AAATTATTTCAAGAGCTCAAGGCTGCATTTCATTGGGACTTGGAGAAATCGTTATCGAAAGCATTTTCCGGTCTCATCTACTTCGTTTAACAATGAAAAT TCTAATATTCACGCCTCTCAGAATCCACTCATCGTCCATGTTGACATGGACTGCTTTTTTGTCTCGGTGGTTATCAGGAACCACCCTGTATTGTTGGACA AGCCAGTAGCAGTCTGTCACTCAAATAATTCGAAGGGAACTTCTGAGATTTCCTCTGCAAACTACCCTGCTCGTGGTTATGGTATTAGGGCTGGTATGTT TGTTCGAGATGCCAAGGCACTTTGTCCCCACCTTGTTATCTTTCCTTACAACTTTGAAGCTTATGAGGAAGTAGCTGATCAATTTTATAGTATACTACAT CGACATTGCAGCAAAGTGCAGGCTGTAAGCTGTGATGAAGCTTTTTTAGATGTCACAGATTCAAAGGTTGAAGATCCTAAACTTTTTGCTGCAGCAATTA GAAAAGAGATCTATGAGACCACTGGATGTACGGCTAGTGCTGGTATAGCTGGAAATATGCTTATGGCTCGCATTGCCACTAGAACTGCAAAACCAAATGG TCAATATCACATAACTCCAGAAAAAGTTGAATACGAGTTAAGTCAACTCTCAATTAATGCACTTCCTGGAATAGGGCATGTTTTACAGCAGAAATTGAAG AAACAGAAAGTTCACACTTGTGGGCAATTGCAAATGATTTCCAAGGTTGTACTATCTCCTCACTTATTATATAGTTTCTTTGATTTGTTCTGCTATTCTT AAAGTTCAGTTGCTATTTCTTCTAAAATTTGTACTTTCTGCTTTCAGTCTATTATCAGTGTTCTTGTTTTGGTCTCAACTAAAGAGAATACACACTTAGA GGAAAATATTTGATTTGTTGAAATTTTGGAAACAACTTAGAAGTTAGAAGACAATAATCATTGAAAATGAGAAGCTCATTGACGCAATAAAATATAATGC TAGAATATACGGAAAAAACCTTGAAGTGCTTCAAACAATTATATTGCTACTGGGTTGATTTAGAGATCAATGCTTTGTCAATGGACATGATTCATGATAG AGCTTAATGACGTCGTTCGGTCCATTTAACCGACCCAACCTATTGGGACTAAAGTTTGGTTGTTGTAAAAGCTCATTTACTTGCATACTCTGTAGTTATG TCTCACTTTTATTTTGGGCATCTAGTTGAATAACATTTGTAATTTTCAAGATTCTGTAATTGCTTTCCTGGCGTCTGCAGGCTTCCCTGCAAAAGGATTA TGGAGTTAAAACGGGGGAAATGCTGTGGAATTATAGCAGAGGAATTGATAACAGGATGGTTGGGGCCATTCAGGAAAGTAAGTCTATTGGTGCTGATGTA AATTGGGGAGTTAGGTTCAAAGATATGAAAGATTGTGATCACTTCCTAATTAACCTCAGTAAGGAAGTTTCTTTGCGATTGCAAGGTTGCGGAGTGCAGG GGCGCACTTTCATTATCAAGATCAAAAAGAGAAGAAAAGATGCTGATGAACCTGCAAAGTTTATGGGCTGTGGTGACTGTGAAAATTTGAGTCACTCAAT AACGATTCCTCTTGCTACTGATAATGTGGAAGTAATCCAAAGAATAGTAAAGCAGCTTTTTGGATTTTTCTACATAGATGTCAAGGATATTCGGGGTGTT GGCTTGCAGGTTTCAAGACTTGAAAGTGTAAATACTTCTAAGCAAGGTGCAGAAAAGTGTACTTTGAAATCATGGCTTACTTCAGGATCTGCAAGTATGG GAAAACAGAAATATCCTATGGGTAACAAGCAGAATATAGATGGCATGTCCAGTCATGGATGTAGAGATTTGCAAGGGTCTTCAGTTCTAATAGACAATAA CATAGTAAATAACCAAGCTAGTGCAGACACAATGTTAACAGCACCTCCTTTATGCCAACTAGATGTCGAAGTAATAAAGAATCTACCGCCAGAAGTATTC TCAGAATTAAATGAAATGTATGGAGGAAAGTTAGTTGATTTTGTTGCTAAAGGGAAAGGAACAAATGAGAGTGCTAGATCTGTACGAAATTTGATTATAG AGCAAGAAGGCAAGTTTTTCTATGTTATATTATTATAGCTGCTTTTACTAATACCCAAAATCATGCAGAAAAAGGCTACTTTTACTCATGATTCATGAAT GTTTGGCAATGCCCCATATGCTTTTTAATTGTGTTTCTTAGCAGCTATAAAGAAGGATGCAGAACTTTCCTATTCTGACCGAATTCCTCAAAACAAGTTG TTACCAGAAAACAAGAAAGAAGCAGAGGTAGTTGAAGTAGGACCAGGCTCAAGGGATGGATCCTATGTCAAGGTTACTCACATTTCAAGTTTTGAGAAAG ATGATTTATTGCCTTCTTCTTTAAGTCAAGTGGATGCTTCAGTGTTACGACAATTACCCGAGGATTTGAAAGCCGCCATTGTTGAGCAGCTTCCTACACA CAGGAGGCAAGAGTCTTGCTCCAATGCTGCTGTGCCCCCTCTTAGTGAAATCGGTCAGGCACCATTAGGTATTAAAAGTTCTGAGAATCATTCTGGATCA AGTGGTCACGTTTCGAGTGAAAGTCTATGGGCTGGGAATCCTCCACATTGGATTGATAAGTTTAAAGTTAGCAATTGCTTCATATTAAAGAGGCTTGCAG AAATATATTACAAATCAGGGTTGACTAGCACATTATCTTCAGTTTTGCACAAAATTATATATGAATTTCACGAGCTAGATCTAGCGCATCAGATTTCTGA TGAAGCTATTAACATCACGTGTGAGCTACTGAAGCAGTATACCGAAGAGAAGATAGAAAGAGATATTGAAGAGATTTATATCTGTTTTCGGCTTCTGAAA AGGTTTGCAGCAAAGTCACAATTTTTCCTACAAGTGTACAATACTCTATTTCCGCACCTCCAGG BLAST
Tissueflowers
Gene nameLI_gene_47346; 
Additional informationdetails; 

Expression of Ll_transcript_103504

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_103504
BlastpDNA repair protein REV1 from Arabidopsis with 54.56% of identity
BlastxDNA repair protein REV1 from Arabidopsis with 54.72% of identity
EggnogPoorly processive error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by polIV. Exhibits no 3-5 exonuclease (proofreading) activity. May be involved in translesional synthesis in conjunction with the beta clamp from polIII (By similarity)(COG0389)
KeggLink to kegg annotations (AT5G44750)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421546.1)
PfamBRCA1 C Terminus (BRCT) domain (PF00533.25)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;