Ll_transcript_102178

• Id Trinity: FTRINITY_DN54970_c3_g1_i4
• Name Transcript: Ll_transcript_102178
• Sequence: GGAAAACCTTTGTTAAACCCCTTATTCTTATTCTTCTGTCTTCTTCTTCTTCTTCTTCAGTTTCACATAGCAGAGAGAGACACAGAGAAAAATGTTTAGG AGAAGAGTGATATCCTCAATTTTGAAACACACCAAAGAAGCATCTCAGATTCACAATATCAGAGCCACTCAACATTCATTCAAGTTATTAACCCCTCCAA TTGTGAAACACTCTTTTCATTCATTTCGATCCCATTATCCTTTTCTTATTCTTAAGCTCGGTCATAATGTGGGATACATCAGGAGCTTTTCTAGGATAGC ATCTGCTGAGGCTGCTGGACATAAGGAAGGATTGAAAGTGTTTGTGAATGGGGGTGCTCATGCTCAGAAAGCAGTTGGAATATGGCTCTTTGGCTCGGCT GCGTGGGTGTTTAGTATGGTGGTACTTGGTGGTATTACCAGGCTCACACGATCGGGTCTTTCAATGACTGATTGGAAATTCACGGGTAGTCTTCCTCCTT TGTCTGATGAGGAATGGTTGCAAGAGTTTGAGAAATATAAGCAGTCACCTGAATACAAGCGTGTTAACAAAGGGATGAAGATTGAAGATTTCAAATTCAT ATATTGGATGGAATATGCACATCGAATGTGGGGAAGGGGGCTGGGAATTATGTTTGCTTTGCCTTATTCATATTTTCTCCATAAGGGGTACATTACCGTG AGATTGGGACTGAGACTCTCTGCTCTGTTTGCCCTGGGTGCTGGGCAAGGTTTTATTGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCACCATCTG AATATTCTCAGCCAAGGGTAAGCCCTTATCGTCTTGCAGCTCATCTTACATCAGCGTTTGCTATTTACTCTGGCCTTGTTTGGACTGCCCTTTCTGTTGT TATGCCGGAACCACCTGCTGAGTCACTAACATGGGTTCGTGGGGCAGTTAAAGTGAAGAGACTTGCGTTGCCTGTCGGCCTGCTTGTCGGTCTGACTGCT ATTTCTGGTGCATTTGTTGCTGGAAATGATGCAGGGCATGCATTTAATACTTTTCCTAAGATGGGTGATGTATGGATACCAGATGACATCTTTGAAATGA AGCCTTTGATTCGAAATTTCTTTGAGAATACATCCACCGTGCAGCTCGATCACCGAATTCTCGCAACCGCAACTCTAATCTCAGTATGTGCTTTATGGTG GTCAACAAGAAAGCTGGACATACATCCTGCAGTGCGATCTGTGATTGGAAGCACACTTGGCATGGCAGCTCTTCAGGTTACCTTAGGAGTTTCAACACTT CTTTCATATGTACCTGTTTCACTGGGAAGTGCACATCAGGCTGGAGCATTAACTCTAATGACATTTATGTTACTACTTAATCACACTGTTCGAAAGCCAT CCTTGTCCCTTCTCAAATCCCTGCCTCAAGTTGTCAAAGCAAACTAATTCTTTCTTCTTTCCCACCATTGCATTGCAACAAGGATTAGCCATTTTAATTT TTAAGCTGACATGTGTTATTTACTAATGTTTTTGTTTCATGCTTAATTTGACATTGAGTTCCTTGTCCAATTTTCCATTGTTGGAATCTTCTTCATTTTG TTTGTACATTTGTGCCCTGAAAATTCATGATGATAAATCATCTATGGGATATATCCTAAAAATCCTAAAAAGTATTAGATAATCATTATATAAACCATAC TTACAATATGAAACAATGCATGACATTCATTGGCTTTTCCTTCATTTTTTACATATCATTGTTCCAGAATTTACGGCTACAAATATTGCTCTATAATCTT TGTCAGTGTTCATATGTTATGTATCATCTGTTTCTCAATCCAGAGTTACTTAATGGATAACACTGTGGATGTCATTTCTGTTTGTATGTGATGGTATTGG TTAAGTCCCTAGAGGATAAAACACTATTTCAATGCTAGAAGAAAATACCCTTTGTAATGTGCATCCAAACTTGGCATTACATCTGCCAACGAACGAACGT TGGTTCAAGTGGTACATGTTTGATTCCCCTTAAGCAAGGTTCCGGGTTCGATCCTCGTGGATGGAAAAAATGTCCGCTAGGAGAGTTAGCCCCACATACA TGTGGATGTTCCCGGCTCGGACATGAATGCCTCAAGTGCGAGGATACTTGTGGGAAACCAAAAAAACTTGGCATTACATCTATTAGTGGG
• Tissue: flowers
• Gene name: LI_gene_47414;
• Additional information: details;

Expression of Ll_transcript_102178

FPKM

• FPAB: 5.6
• FPNAB: 13.2
• LF1: 10.8
• LF2: 8.3
• LF3: 7.8
• LF4: 9.3
• UF1: 10.2
• UF2: 10.7
• UF3: 8.3
• UF4: 8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_102178

• Blastp: Cytochrome c oxidase assembly protein COX15 from Arabidopsis with 74.57% of identity
• Blastx: Cytochrome c oxidase assembly protein COX15 from Arabidopsis with 74.57% of identity
• Eggnog: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group (By similarity)(COG1612)
• Kegg: Link to kegg annotations (AT5G56090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435718.1)
• Pfam: Cytochrome oxidase assembly protein (PF02628.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;