| Id Trinity | FTRINITY_DN54974_c1_g3_i11 |
|---|---|
| Name Transcript | Ll_transcript_102536 |
| Sequence | GTTTTTACAATATTTTTTCGGTTTGTGAGTTGAGCCATGAAGAGGAAATGTGTGAAATTGAAGACGTCAGAGTTATATTTTATGACTATCGAGCCTTCCA TTTCCTTTCTGTCTCGAAAACACAACTGGCAAACAGATGCTTAATGTCTTGTTACTTCTGTTTTTTAGCATTAGAAATCTATTCTTGACAACTGCCTGAC ATTTCGATAACTAAAGTTGTTGTTCGGATATGTTGCATATATAACATTACTCTGGTTATCCAATCTTATGTTTGGGTTTGACTATGGTTTTTAAGGGTGT AAATAAATTTTGTATTTTTACAAATTTGTAACTGAGATTTAAATTTCAGTTGTTTTTCAGGAACATCGATGGCGGCCTCACACCTCCTTTATCATTCTCC TTCCTTTCCAAAAACCTTAAATCACTCTTTGAACCAAAACTCTTTCGCCCGAAACCTCGTTCTACCTCTCAAAGCCACCTTTAAACCACTGGTTCTTAGA GCAGTTTTGTGTCAGAGTAACACTGCTAAACCCCAATTACATGACTCCCAGAGTACCACTAATTTTCAACACTGTTTCACCAAGTCTGAAGATGGGTTTC TGTACTGTGAGGGTGTTAAAGTGCATGAGATTATGGAATCTGTTGATAAAAGACCTTTTTATTTGTACAGTAAGCCTCAGATTACTAGAAATGTCGAGGC CTATAAGGACGCGTTGGAGGGATTGACATCTATAATCGGTTATGCTATCAAGGCCAACAACAATTTGAAGATTCTGGAGCATTTGAGGCACTTGGGTTGT GGTGCTGTGCTTGTAAGTGGGAACGAGCTTAGGCTGGCGCTTCGTGCTGGGTTTGATCCCAAAAGGTTGAATCATACTCAACCCATGAATTTGTCTACGA CTCTACATTTGTCGATGTATTTATGTTTTTAAGGATCTTTTCTGCATAGATATCATATGAGCTTTTTTTACCATGTCAGCTGCGTATAAAGGACCCCATT TGGAACTTTCTGACCTTTAGTTTAAAATTACATTGTTTGTCATTTCTCTGTAACTGGTTCTTTGAAACTTTTTCTCATAAAAATGTTTCATAATTAGTGT ATTTATGGTCAGTAACTGAAAACATGGATGAATAGGTGTATCTTTAATGGCAACGGAAAACTCTTGGAGGATCTGGTCTTGGCTGCCCAAGAAGGTGTTT TTATCAACATTGATAGCGAATTTGACCTGGAAAACATTGTAGCGGCTGCAAGAATTGCTGGAAAGAGGGTCAATGTTTTACTTCGAATAAATCCTGATGT GGATCCACAGGTCCATCATTATGTTGCTACTGGGAATAAGAACTCTAAATTCGGCATTAGAAATGAAAAGCTGCAGTGGTTTCTAGATGCTGTGAAGGAG CATCCTAATGAAATAAAGCTTGTAGGGGCCCACTGCCATCTTGGGTCAACAATTACCAAGGTGGACATTTTCAGGGATGCTGCAACTATTATGGTTAACT ACATTGACCAAATCCGAGCCCAGGGTTTTGAAGTTAATTATTTAAATATTGGTGGTGGACTTGGCATCGATTATCATCATTCTGGTGCTATCCTTCCTAC ACCCAGAGATCTCATTGATACTGTACGGGAGCTTGTCCTTTCACGTAATCTTAATCTCATCATTGAACCTGGGAGATCACTCATTGCAAACACGTGTTGC TTAGTTAACCGGGTGACGGGTGTCAAAACTAATGGATCTAAAAACTTCATTGTAATTGATGGAAGCATGGCTGAACTTATTCGCCCTAGTCTTTATGATG CTTACCAGCACATAGAGCTGATTTCCCCTGCCCCAGCAAATGCCGAGGTTGCGAACTTTGATGTGTTTGGCCCTGTCTGTGAGTCTGCAGATTTCTTAGG AAAAGATAGGCAGCTTCCAACACCAGACAAGGGTACTGGTCTGGTTGTTCATGATGCTGGTGCTTATTGCATGAGTATGGCATCAACTTACAATCTAAAG ATGCGGCCTCCTGAGTATTGGGTTGAAGACAATGGAACAGTGAGCAAAATCAGACATGGGGAGACATTTGAAGACCACATCAGGTTCTTTGAGGGGCTTT GAGTGAAGACTTCATTTACTGGTGCAAATTGAAGCTTGTGATTTGTTTGTACCTTGTCTTTGGGCAATGTCATTTATAGTTATGTTTCTTCTTTTCTGGT TGAATCCTGACACTTTGAAAGGGAAAGTATGTTAGAAAAATTCACTATCTGAATTAAAATAAATTTTATGGTGGTCAACATGCATATTTGGTGCATTCAA CTACAACTAAAACTTGATTTAATATGTCCTTTCAGTTTATAGCTTCAGTTCTCAGTAAAAGCAAGTGTATGATCCTATTAATTTGATGACTATTACTATT GAAAGGACGGCGAGGTGCATGAAGCTTATATAGTTAATGGGGTCTGAGATAATTATATAAATGAGCTACTGAGGGATATTTTTTTGTCATGTGTAAGAAA ATATTTAATTATTAAATTTTTAATTTAAATATATTTTTATATTTATTTGTGTGTTCCTATCACCGTTTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47445; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102536
| Blastp | Diaminopimelate decarboxylase 1, chloroplastic from Arabidopsis with 84.83% of identity |
|---|---|
| Blastx | Diaminopimelate decarboxylase 1, chloroplastic from Arabidopsis with 84.83% of identity |
| Eggnog | Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)(COG0019) |
| Kegg | Link to kegg annotations (AT3G14390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431286.1) |
| Pfam | Pyridoxal-dependent decarboxylase, pyridoxal binding domain (PF02784.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |