| Id Trinity | FTRINITY_DN54982_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_103356 |
| Sequence | ACAGAAATTTCATCAATCTATGTCCCTACCAACTTTACCAAATGCATAATAATGAAAAACGCAGACCATAATTATGTAGCTATGAAGCGAATTTTATAAT ATAACTTGGCCATCAAAGACTTTTATCTAAATCTCTTGCTTCTTGGAGTCATTTTCTTTATTCAAGGTGCTTAGATCTCTATAGAGTTTCTAGAATCAAG AAAGATTGTTCCAACATCATAGATGGCACAACCAACATCATCTTCATTCCTCCATAGATGGACTTATGATGTGTTTCTAAGTTTTAGAGGTGAGGATACC AGAAATGGTTTCACTGGAAATCTTTATAACACTTTGAGTCAAAGGGGAATTCACACATTCATAGATGATGAAGGCCTTAGGAGAGGTGAAGAGATTACCC CAACACTTCTAAAGGCTATTGAAGAATCTAGGATTGCAATTGTCATATTCTCTGAAAGTTATGCATCTTCAAGGTTTTGTCTTACAGAACTTGCTAAGAT CATTGAGTGTGTAAATGGCAAGGGAAGATTACTTTTACCCGTTTTCTATGGCGTCGATCCATCAGAAGTGAGACATCAAAGAGGGAGCTATGGAGAAGCA TTAGATGAGCATGAAAAGAGGCAAAATGTGGAAGAATGGAGACTGGCTTTGCATAAGGCAGCAAACTTGTCTGGTTGGCATTTCAAACAAGGATATGAAT ATGTGTTTATTGGAAATATTGTTGATGAAGTCTCGAAAAAGCTTAATCGTGTTCCTTTACATATTACTGATTACCTTGTTGGGATGGAGCCTCGGATACG AGAAGTAAACAAACTTCTTAGAGTTGGGTTTGATGATGACCAAGTGAAGATGGTAGGGATTTGTGGGATTGGTGGAATAGGTAAAACAACAATTGCATAT GCTGTATATAACTCAATTGCCGATCAGTTTGAAGCTTTATGCTTTCTCTCCAATATTAGAGAAAAATCAAATAAGAATGGTCTGGTATCACTCCAAGAGA CACTACTACTAGAAATGGTTGGGGAGGATATTAAGTTGGGAGATGTGAGTCAAGGAATTCCAATTATAAAAAGGAGGCTTAATCAAAAGAAAGTGTTATT GGTTCTCGACGATGTTGACAAATTGCAGCAATTACAAGCATTAGCTGGAAGGAGTGATTGGCTTGGTTCTGGTAGTAGAGTCATTATAACCACAAGGGAT AAGCATTTATTACTTGAACATGGAGTTGCAAAATTATATGATGTGAAAGAATTAAATAGGGAGAAATCTTTTGAATTGTTTACTTGGCATGCCTTTAAAA GTAATAAAAATGATCCAAGTTATGTGAACATGTCAAATCGCGCAATTCGTTATGCCAATGGCCTTCCATTGGCTTTGTGTATAATTGGTTCTAACTTGTT TGGTGAAGGCCTAGAAGAATGGGATTCAACATTAGATAACTATGAATCTGGGACAAATAAAAGTGTTCAAGAAATACTTAAAGTAAGCTATGACAGTTTG GAAGATAATGAGAAAGGAATTTTCCTTGACATTGCTTGTTTCTTCCAAGGTCAGAGAATAGAGTGTGTCATCGACATGTTGCTACATGGTCGTGGCTTTC GACCAGAGTACAGTATCAAAGTTTTGATGCATAAATCTCTCTTAAGGGTTAAATGTGGTCATGTAAGTATGCATGATTTAATAGAGGAAATGGGAAAAGA AATTGTGAGGACAGAATCACCAGTAGAGCCCGGCTACCGCAGTAGGTTATGGTTTTATGAAGACATTATTCATGTTTTAGAAGAAGACATGGGAACTGAA AAAATCGAAGTCATGATGTTGGATTTGCCTGAAGATGAAGAAGTATGCTGGACAGGGGAGGAATTCAAGAAGATGAAAAACCTCAAAATACTTAAGGTTA TAAATGCAAACTTCTCCACGGGCCCCAAATATCTCCCAAACAGTTTAAGAGTGCTTGATTGGAGGGGATATCCATGGCCATATTTACCCTCTGATTTTCG GCCAAGGAAACTCAACATACTCAACTTGCCTAATAGTAGTCTTGTATTGAACGCTCCCTTAAAGGTTATACATATTTTATGTCCTTCATTTTTTTATCCT TTTATATCGCATATCAATAGACTTGGATTCAAATTAATTAAACTAATTTTTTCTGTGAACATGTAGAGTTTTAAGAGTTTGAGTCACTTGAATTTTGAAG GATGTGAATCTTTAATACAACTACCCGATGTATCTGGCGTCCCAAACCTAATAGAATTATGCCTCGATGATTGCACGAATTTGATTGAAGTTCATGATTC CATTGGATTTCTTCCTAAACTCAGAAAGTTGAGTGTTCAAGGATGCACTAGGCTTAGCAAATTTGCATGCAGTATCAACTTGACATATCTTGAAACTCTC TCTTTGTATGGTTGCTCAAGTCTTAAAAAATTTCCAAAAGTTTTAGGAAAGATGGAGTATCTAGAAGATGTTGATTTAGGATCCACTTCAATAGAAGAAT TGCCATATTCAATACAAAATCTAATTGGTCTTAGAAGATTGGACTTGATCAATTGTAAAGGGTTGATTCAACTGCCAAGTAGCATTTTCATGTTACCAAA ACTTGAGTCATTGGAAGCTGAATCATGTAGCGGGTGCCAAATATTAAACAATGATTGTGAAGAAGAAGAAAGTGTGAGCTTAATAGACTCCTCAAAAGTG AAAGATCTTCACTTCAGAGCATGCAATTTGACAGATGAATTTCTTCTTATTTATCTCACTTACTTTCCCAACATAGAAATGTTACACCTAGGCAATAATA ATATCACAATACTTCCTTCATGTATTGAAAAGTGTCTCTATTTGGAAAGCCTCTATGTGGATGACTGCAACAAGCTTCAACAAATTATGGCACTTCCACC AAACATTAAAAATTTCTCAGCAAGGAATTGCATATCCTTGACTTCAGATGCAACAAGCTTATTATTGAGTCAGGTGCTTCACTTTTTCTTAGCTTCTCAT GATTATAATTAAGATATTCTTGTATTAGTGTAGCTTAAATAGTGTGTAACCTAAGCACAAGCAATGACTAAAATGCATGACATGTAAATATATCCAACAC GCCCCTTAGTAAAATTTCATTGTTCTTGCCTTGCATGAAATGTTGACATTTCTCAATGTTTTAATCAATTTTTAAGCCATTGAAACTTTGGGAAATGATG AAGCAAAAATTTATTTTCCTAATTGCATCAATTGGTTTCTCTCAGCATAGAAGTTAACTTTGCACAACTAAATTCATGAGTTCTGATAAATATTTGATTT ATAGGAAATACACGAGGCACGAAGCACGCATTTTATTTTTCCAGGAACAAAAGTTCCAGATTGGTTTGACCATTGCAACAAGGGATCATCAATATCTTTC TGGTTTCGTAACAAATTCCCAGCAATTGCTATGTGTTTTGTTTTCGGATGTTTAGACAAAGAGCCAAGACATTTGAGGTCCAAGTTCCATGTGTTCATTA ATGGCAAGCCACCATTCTATTCTAATGATAGTGATAGTTTCATAATGCTGAGAGATCATACATATATCTTCGATCTACAACGAGTAGTGGAACTTCCTAC GCATCAACTTGATCAGGTAATTTTCGAAGACGAGTGGAATCGTGTGGAGATTCATTGTTTGGATAGTCGAAACGTTTTAAAATCGTCGATAGGTAATGCT GTTGTTAAATGGAGTGGTGTGTATGTGTATAAGGATGGGAATAACATGGATGATGTTTGGTTTCTTAGTACTAATCCTCAAAACAAAACTTATGTTGATT TGGTGGAACGTTACCCGTGGATCAAGAAACAACATAACAATGGTAAGAATCAAGATACAATTTTTCTTTTGGATTGATGAAAATGGATGGGATGAAGTGT AATGTAATGGTACTAGGATTACTTGTTTGAATTGATCAAATAGGATGAAATGGATTGAAACTATATCATTCAATATCTCTATATTTATTCTATGTTAATT TGGACAACGATCTGATGTCTCAAAGTCTGTTCGAAACTAATAACAACATGTCACATTAATAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47525; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_103356
| Blastp | TMV resistance protein N from Nicotiana with 39.84% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 35.32% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | mtr-MIR2609b (MI0011863) |
| Ncbi protein | Link to NCBI protein (XP_020991468.1) |
| Pfam | TIR domain (PF01582.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |