Id Trinity | FTRINITY_DN54991_c0_g1_i9 |
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Name Transcript | Ll_transcript_102681 |
Sequence | CTATAATTCATTGCAAGCTATCAACTTGGAAGGGAACCCTGCTCAGAAAAATGTTGGAGACGAGCAACTAAAGAAATATCTGCAAGGCCTCCTCCCCCAT CTTGTCTACTATAATCGACAGCCTACCAAAGCGAGGACTTGGAAAGATGAGGCTGATCGTTCAGTTCTATTAGGCAAGATTTCCTATCAGTTTGATCGTA GCCGAAGCCTTAGAGCTGATCGCAACACCACCACAAGGAAGAGCAGTAGGCCATCGAACTCTTCCACTGTTGGCAGAAACCAAAGGGCAGAGTCGCAAAA ACTAGCCAAAGGTAAACAAATCCAGCCGCCACCATCATCTGGAACAAGTGGATCAACCCAAAGTCGCAATCATTTTGATGATATGAGTTTAGTATTGAAC TCGACAGCGAAGCTCTCCATTAGCAGTGAGGGATACCAGGGATCTTCGTAAGTAGCTATTCCCATTGCAACTTGTTTCCTCCATTACCTTTATTTCGGTA TGCATCTCTATTTACATTGGTTTTTTCATATTCACGTCCTGTGTTTGTTAGTAGTACAATAACCACTTTGTTGTTTGTCCTTTACAATAAATTTGTTGCA CTAGGCTTACAAACATTGGTCTGTAGGTCGTATGCCCAATAAGAAATATTATTATGTTAATGTTGTATTTCTATTTCAGGACAAGGAATGCTATAATAAG ATTTTCTTTTTCAAACCTTTTTTTAACATACTCTAGGCTAGTTCTCACTCATTTTTATACCATATCATAAAGAGTATAATGTGAGATTATAATCTGTTTT TGTTTAGTTACCTTAGTTGAAAATTGAATATAAACTAATTTTTTTTGTTTTAATGGTTCCAAAAGCCACAATGATTCGCCAGTTTCAGGTTGCGGACAAG ATAATGACATTATCCCCACTGATCACTGTAAAAAGAATCAAAACCCTGAGTTTCAAGTTAGTTCAGCTCTTGCAAATGATGACTTAATTTTTTCAGTTGG AGATCTGACAGCTTCAAATAAGGATGCTCTTGAAATTTATGATACTCCATTATCTGCTGAATTTGCTAGTGACTCTGCCGAGCAAACTTCTGGTCCGAGT ACCCCATCTTTAGTGAAGTCACATTCTTTATCCGATTTCATAGATCATGCACTCTCTTCTGGAGCATACGCTTTTAATCACCCACCTTCAATTTCAAGAT CTTCTAATGATCTTCATGCTTTATGTAAGAGGCAGAAAGATGTACTCATCAATGAGTCAGATCATCAAATAAAGGGAGATCAAGAAAGAGAGAATGATAT AGGAAACATCAAAGAGAGTCATATGGATAATTTCCTCAATGCTGGTGTTGATTCTTATCTGATTTCTGGTTCACCAAAAGATTGGGTAATGCCAACTATA GATGAGATGAGAGATATTGAAACCCTTCGAAGAGATTCTTCAAGTGGTTGCTTTGGTGAATATCCTAACAAAGATTTTAAGGATAAGCGCATTAAGGATT GGGTAGTAGATCTCCAACATTGTGGATCACCTCTAGAGATAGTAAATGAGTTGCCTGAATCTGTAGATCCTGTCATTGATGTTAACACCAAAAATGGTGT GACTGCTGTCGAGGTGGACCATAAGGTCACTCCAGGAATGGGAGATGCTGAAAAATATATATCTTATTTAAGTGATGATGCCACAACGGCCAACCTGGCA AATCATGGGTTGGTTGTGATACCCTCTTTAAGTGCTTTTGTGAGTTTGAAGGTTCTCAATTTGTCTAGAAATGCTATCGTGAAGATAACTGCTCTTCCTC GAGGACTTCACGTTTTAAATTTGTCAAAAAATAATATCTGCACTATAGAGGGATTACGTGAACTAACACGCCTTCGTGCCATAGATCTCAGCTTCAACCG AATTGTAAGAATTGGACATGGTCTTGCTTCATGTTCATCTCTGAAGGAGTTGTACCTGGCTGGAAACAAGATCAGCGAAGTAGATGGTCTGCATCGCCTC TTGAAACTAAGCATCCTTGATCTTCGTTTTAATAAAATTTCAACAACCAAATGTCTAGGCCAACTTGCAGCGAACTATAATTCATTGCAAGCTATCAGTT TGGAAGGGAACCCTGCCCAGAAAAATGTTGGAGACGAGCAGCTGAAGAAATATCTACAAGGCCTACTCCCCCGTCTTGTATACTATAATCGACAGCCTAC CAAAGCGAGCACTTGGAAAGACGAGGCCGATCGTTCAATTCTATTAGGAAATAGTTCCTATTACTTCGATCGTAGCCGAAGCCTTAGATCTGACCGCAAG ACCACCACAATGAAGGGCAGTCGGCCATCGAACTCTTCCACTGCTGGCAAAAACTAAAGGGCAGAGTCGCCAAAACTATCCAACGACAAGCAAATCCAGC CGCCACCATCAATTGGAACAAGAGGATCAACCCAAAGCCACAATCATTTTAATGTTCCTAGTAAAGTATTGAACTCGACATCGAAGCTCTCTATTAGCAA GAGTCACAGAGAGGGAAACCTTGAATCTTTGTGAGTGGCTATTCCATTGCAACTTGTGTTGACCACCACCTTTATTTCAATAGGCATATATTTACATTGG ATTTTTCATATTCATGTCCTGTGTGTTTGTTAGTAGTACAATAAGGATGGAGATCACCTGTCCGCAACAGTGTCCTATACCATGTCTCATGCCAATCACA TATTTACATGCAGATAAAAGAAAAAATTTAAAAATAAAAAGTTATAAAATGTAATCTTTTTATTGGTTTGGGACGGGAAATGGAATACCATTGGTGATCT CCATCCATACAATAATCCGTTCGTTGTTTGTCCTTTACAATAAATGTGCTGCACTAGCTTGCAAGCATTGGTCTATAGATTGTATACCCAATAAAAAGTA TTAATATGTTAATGTAGTATTTGACAAGCAATGCTATAACAAGGCA BLAST |
Tissue | flowers |
Gene name | LI_gene_47589; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102681
Blastp | Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 37.8% of identity |
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Blastx | Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 37.8% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (DDB_G0284039) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453753.1) |
Pfam | Leucine-rich repeat (PF14580.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |