Id Trinity | FTRINITY_DN54992_c0_g2_i3 |
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Name Transcript | Ll_transcript_101409 |
Sequence | CAACCTTCTTCTTTCTCTTCATAATAAAGTTCTATTGTACGCCGTTAACAAACACCTTCTATAACTGCATAATTAACTAACTCTTCCAACAAATGTCATC CCGCATTGTAGTGGATAATTCGTTGCCGGTTAACAATATGGCGCCGTATTTTGGTCTAATCGAACTCGATGATGTCACGCGCCGCCCTCATTCCGGTGAA TCTATGACACTCGGGCAGCTTCTGAAGCACGTCGGAGATGTGCAAAAGGAAGCTTCCGGTGACGGTAGTGAGACGCCGGTGCACCATACACTTGAAATTT TCGACGGTGGTGATGGAACTGAGCACCGTGCGGTTCCGTTTGTGCTTTCGTTTAGTAATCTTACATACAGTGTCAAGATTCCGTGGAAATTGAACTTCTC GGAAATCTTTTCCCGCCGCCGGCAACATCACGGTGCGGCAGCGGTGGCGGTGGAGCCAGCTATTGGAGAGAGTGTTTTCACACGGAGCAAGACTCTGTTG AATGACATCTCCGGCGAAACACGTGACGGCGAGATAATGGCGGTTCTCGGAGCAAGTGGTTCCGGAAAATCTACACTGATTGACGCGCTGGCGAACCGAA TCGCGAAACGAAAATTGAAAGGAACCGTTGCACTGAACGGTGAAGCCTTGGAATCGCGTCTTCTGAAGGTGATATCTGCTTACGTGATGCAAGACGATCT CCTCTTTCCAATGCTCACCGTCGAAGAGACTCTAACCTTCGCCGCCGAATTCCGCTTACCACGCACTCTCTCAAAATCGAAGAAAAAGGCTCGCGTCCAA GCCCTAATCGACCAGCTAGGACTCCGAAACGCCGCGAAAACAATCATCGGAGACGAAGGCCACCGCGGAGTCTCCGGCGGAGAACGGCGCAGAGTCTCAA TCGGAATCGACATAATCCACGACCCTATCCTCCTTTTCCTAGACGAACCAACGTCAGGACTTGACTCCACAAGCGCGTTCATGGTGGTGAAGGTTCTTCA AAGAATCGCTCAAAGCGGAAGCATTGTAATCATGTCAATTCACCAACCTAGCTACAGAATCCTAGGCCTTCTCGATCGCATGATCTTCTTATCTCGCGGC CAAACCGTTTACAGCGGTTCTCCGTCACAGTTACCGTCGTTCTTCGCCGAGTTCGGTCACCCTATACCAGAAACCGATAACCGCACCGAGTTCGCATTAG ACCTAATTCGCGATCTAGAAGGTTCCCCTGGTGGAACAAAAACCTTAGTAGAGTTCAACAAATCATGGCAGAGCATGAAAAAATCACAGCAACAAGCACT TCACACTACAAATCGTTCTCCTGAACAAAACAACATGTCATTGAAAGAAGCAATAAGCGCAAGCATTTCAAGAGGGAAACTAGTTTCAGGTGCAAGCAAC ACCAAAACAAACACAGCATCATCAATGGTGCCAGCTTTTGCAAACCCATTTTGGATTGAAATGGGAACACTTTCAAAGCGTTCATTCTTGAACTCAAGAA GAATGCCGGAGTTATTTGGAATGAGATTGGGTACAGTAATGGTAACAGGGTTCATTCTTGCAACCATGTTTTGGCAACTTGATGATTCACCAAAAGGGGT TCAAGAAAGGCTCGGGTTTTTCGCTTTCGCTATGTCCACCACTTATTACACCACCGCGGATGCACTCCCTGTGTTCCTTCAAGAGCGTTACATCTTCATG AGAGAAACTGCTTACAATGCTTATAGAAGATCCTCGTACCTTGTCTCACATGCTCTTGTTGCTATGCCTGCATTGGTGTTCCTATCATTGGCTTTTGCTG CAATAACATTTTGGGCTGTGGGTCTTGATGGTGGGTTTTTGTTCTACTTTCTGGTAATACTAGCTTCATTCTGGGCTGGGAATTCATTTGTAACGTTTCT ATCTGGTGTGGTGCCTGATGTGATGCTTGGTTATACTATAGTAGTTGCAATACTTGCATACTTTCTGCTATTCAGTGGGTTCTTCATTAACAGGGATAGG ATTCCAAGTTACTGGATTTGGTTCCACTACATGTCTTTGGTGAAGTATCCATATGAAGCAGTTCTTCAGAATGAGTTTGGTGATCCTATAAAGTGTTTTG TAAAAGGGGTGCAGATATTTGATAATACTCCACTTAAGGCAGTGCCTAATGCAATGAAGGTGAAGCTGTTGGAGAGTATGAGTAACACATTGGGGATGAG GATTACAAGCTCCACATGCTTGACAACAGGTTCTGATGTATTGCAGCAGAATGGAGTGACACAATTGGGAAAGTGGAATTGCTTGTGGGTCACAGTGGCT TGGGGTTTCTTTTTCAGGATTCTATTCTACTTGTGCTTGTTGGTGGGAAGCAAGAACAAGAGGAAGTGAAGTGATTGATCATGTTCTTTATTACTTTGCT ATTAAACCTATCATCCAAATTAAACTTTGTTTGGCTAGTTATTACTATGTTTGAATTCTCTATTTTTCTAATATGTTTCTTTGCAACTTCTGCCATTATT ATGCTACAAATCTACAATAATGTAATATTCATTTCCTTATTTGTTTGCCAATTTCAATACTCAACTCATGGATCAAATGCTATATTCTTAACTCCATCTA AAATATACAGATTTGGGGTTTAATTCACAACCCTTGAGAACTTGAGAAATCTAAGCCACCACCAATCTATTAAACTAATGTGAC BLAST |
Tissue | flowers |
Gene name | LI_gene_47595; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_101409
Blastp | ABC transporter G family member 1 from Arabidopsis with 74.73% of identity |
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Blastx | ABC transporter G family member 1 from Arabidopsis with 75% of identity |
Eggnog | (ABC) transporter(COG1131) |
Kegg | Link to kegg annotations (AT2G39350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452549.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |