| Id Trinity | FTRINITY_DN54998_c5_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_102643 |
| Sequence | TTCATCTCCAAAACATAACACCCTCTTTTCTTCTTCTCCCTCGAGAATCAAGAACTACCATCACCAATGTCGCAGCAACAAGGTCAAATTCCGATAAACC CCTTGATTCCACAGCAGAATTCAATCTCACAACAAATCCCTATTCAATACCAATACCCAATGCATATGCAAATGCAATACCCTATGCAGATGCACGTGCC CTATCACATCCCATTCCAGATTCCATACTCCGTCCAAGACGCCGCCGTCACCGCCGCTGGTTCCACCGGATATCCAATCTCATCTGCTAAGCGCCGCCGT GAGGACGAGGCCCTGGGAACCGATTCAGCGGCGGAGCTGTCGGCGGCGAAGCGTGTTAAAGGCCAGGATGTGATATTTAGGATCATTGTGCCGGCGCGGC AGATCGGGAAGGTGATTGGGAAGGAAGGTTGCCGGATTCAGAGGATCCGGGAATCGACCAGAGCCACCATCAAAATCGCCGATGCTATTGCTAGACATGA AGAGCGCGTTATCATTATTAGCTCTAAAGACAACGATGAAAAGATTACTGATGCAGAGAAAGCTCTAGAGCAAATAGCCAATTTAATTTTGAAGGAAGAT GATAGCAGTCTTGATGCATCAAAAGTTACTGCAGGGCATGTTGCTGCCAATACAATAAGACTTTTGATTGCTGGAACTCAGGCAGGTGGATTGATTGGGA TGTCTGGTCAAAACATAGAGAAGTTGAGGAACTCCTCTGGTGCCTCAGTTACAGTTCTTGCACCGAATCAGTTACCTTTATGTGCTTCCGCTCATGAATC TGATAGAGTAGTACAGTTATCAGGAGATCTTCCTGCAGTAATGAAGGCTTTGGAAGAGATAGGTTATCAGTTAAGGGAAAACCCCCCAAGACAAGTGATT TCAATTAGCCCAACTTACAATTATGCTGCAATCCGGCCATCCCAACCATATCTTGATCCATCTTCAGGACAACCAATCTTGCAGTTGACTATGTTACATT CGAGATGCTGATTTCGGAAACAATGGTTGGGGGGTTGATCGGCAGATGTGGCGCGAACATATCAAGGATCAGAAATGAGTCTGGAGCAATGATCAAGGTT TATGGTGGAAAAGGTGAACAAAAGCATAGGCAAATTCAATTTGGTGGTAGTGCCGAACAGGTAGCATTGGCAAAACAGAGAGTTGATGAATATATATACT CTCAGTTAATACAACAAACTGGTCCCCAAGAATCAGGGTAAGTGTTTTATGTTAAGAACTAGATTTTAAGCCCGTGGCCGGTGCAATGTACAAGTGCCTA GCGGTTATTATAGAAAATATCTAAACAGACACACACGCACACACACATATATATATAATTGTCTATCTTTGCATGCTTCATGTCTAGATTAAAAATAAAA ATAACCACCACATACCGATATAAACATTATAAGTCTTACATGACATGAAATTTTCTTAAGACAATAAGATACCACACATTTGGGTTTTTTGTTTTGAAGA AGCTTCTGACCCTAAATATATGTCTAAAGTCTGGATCAATTTAATTCAAGTGAGGTAGTTATGTTAGCAGGGGTTGAAGAATACTAACTGCTTCAGAAGA GAAGAAATTTAACTTAACAATTTGAAGCTAAAACACGTTGAAGACATTTAAATATTGTCCTTTATAATCCCACACGTTTTATTGGTGGCAGGTTTTGGGA TTATTATTACTGATGTTCAATCTCAAATGGTTTACTATTCCCTCTAGGTAGTCAATCGCGTGCTATCGCACTGAGATAGTGGTGAACGATGGCTGTCGGC CCTTCCGCGTGACAAAACGGTGGTCTGCGGTGCGGATGGCCGTCATGCCTGTTGCGGATCAAATAGTGAAGTCGCGAGTCAGTACCTGCTACAACCTTGC TTCAAGTTGAACCCTAGTTTAAAGCGGGAAAGTCTTTGTTGCCCTTGTTTTTAATACGTGGCAAAGGTTTTTAGTGTTTCTGGTAAATTAACTGTTCCTT TCCTTTAGTAGCAGCAGCAGCAAAACACGGATAACACGTGCTGCTTCTTCCCCACTCTCCCGTTCCCACTCTCAAGCAAAGCTTTTCCCCCTCACTCTTC TTCTTAACCTCCCACATATCCATTTCTCAAGCAAAGCTTCTTCCCCTCACTTTGCAGTTGTACAACCATAAGAATCATAAGGCAGAAATTACGAATTATG ACAATCCAATTACAAATAGGTAGGAGATTCAAGCAACTAAACTTTCTCATATATAAGTTTTACTTTGTATTGTAGGCGAAGTGCCACCTTCATGAAACCC ATCACTGTCTTTTTCACCCCTTGTGTATTGTTTTTGAACTGCCATAATGTCTTCATATTTTTGTTGTTGAAACTTGAATTGTTTAACAGGTAGCATTGGT AAAACAGAGAGTTGGTGGATATATAGACTCTCAGTTGTTACTACAAGCTGGCACCCAATAATTAGGTGAAGGGTTTTATGTTATGAATTTGGTAAATTGA AAATGTAACAGTTTTTTATAGTATTAACAATCAAGGACCATGCACATCTTGTAATAATTTGTTAATAACTAAGGTTCTTCACTTTCTGTATAAGATTTAA CATATTCTGAGTTAGTATTTTGATGGTTCAATGATAGTGGAATATTGTTTACTCTGTAATGATTATAATTGTGACATTTTAAATGTTTTTATACAGTTGC TTTAGTGTGAGATTACATAAATTTGAAATGTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47639; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102643
| Blastp | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 35.48% of identity |
|---|---|
| Blastx | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 34.41% of identity |
| Eggnog | mRNA transport(ENOG410XNN8) |
| Kegg | Link to kegg annotations (AT4G26000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434259.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |