| Id Trinity | FTRINITY_DN55001_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_68708 |
| Sequence | CTATACTAAACTTTTCTTTTATCATTTTGTTTATGCTAACTAAGAAAATTTATCTTTTACTTGCACTCTAATCAAACCTTGAAAAGCTAAATGGCAATGT CATTGATAATCAAGTAGCAATATTGTAATTGTGGATCCAAATTCCAAGTATTACTTACAACCCAAAAAACCATGCTAAGGAAAAGTGTTAATCTTAGTAA AAGGAATGTTCTTGTGATGTAATAACAAATTTATTAACATGTAAAAGGAGGAAGAAAATATGAAAAGATGTTAGACATGTATGGTCAGTTCAGGCATAAA GAAACTCAAACTTGGTGTCTTTATACTAATTGACTCATAAGAGGGTACCATAAATCCAAAGCTGAAAGAAACAGAACACTCAGATTGATCATTCACCTTA ACAATATTGATTTAGTGTGTCCATTTCAGAACAGCATGTAAGAGAGATCCTTGAATTTTTGTGTGAAGAAGCCAACAATTTTGTGATAACTCATCACTCA AACACCCCATGTTGGATCCTCCTTATTTCATGAACTATGTTTTGTCTAAGTCACTTTGCTCTTTCCTTTGTTTTTCTTAGTTAAAAGCTATTTTACTTCG ACAAAAAAATCTAGAGCTTTTGCATTCTGTGAATCTGGTTTCAGCTTTGAAGCATGTGGGAATCAGGGAGTGAAGCAGGACAGGAATATGGGACTGGAAT TCTCACTTCAAGCAAGCATAGTGTCAAGACTGAAGGATTTGTTCAAAGAGGCCACTCTTGGTAAGTATAATAGTTAAATGCATGATTAGTATAGCATAGT ACCCTTTAAGGATATTATTAATCTCTTGTGCTAATAAGATATTAATACTTTGTGTTATTTCTAGTGAATTGAGATGACAAAAAAATAAGATTGAGAGTCT TGATAATACTGTTTTGTACTGTTAATTTACCCATCTCAAACTGTTGAAACAATAAGCTGCATAAAATTGTAGTCTCTCTCTTCCTTTTTTTCATGTAGGT ATGTTGCCACTGATATTCCAAGTGACTTCTTAGTTCAAATTGGAGAAGCTAACTTCCACTTGCACAAGGTAGCTACCTATCCTTTTCTCTTTACAAAAAA TTACTATGTAAAGTTATCACTTGTACTATTGAACTTTGTGACTTTTCTTGTTGTTGTGAAAGTATCCTTTGCTATCTAGAAGTGGAAAGCTGAATAGAAT CATAAATGAATCAAGGGACCCTGATTTGAATAAGATAGTTATGGATGATATCCCTGGAGGGCCTGGGGCTTTTGAACTTGCAGCCAAGTTTTGTTATGGA ATTGCTGTTGATTTAACAGCAGGTAATATCTCTGGCCTAAGATGTGCTGCTGAGTATCTTGAAATGACAGAAGACTTAGAAGAAGGGAATCTAATATTCA AGACAGAAGCATTCCTCAGCTATGTTGTTTTGTCTTCATGGAGAGACTCCATAGTGGTGCTGAAAAGCTGTGAGAAGCTCTCACAATGGGCTGAGAACCT TCAAATTGTTCGCCGGTGCAGCGAGTCCATAGCTTGGAAAGCTTGTGCTAATCCAAAGGGTATAAAGTGGTCCTACACTGGAAGAACAGCAAAGATTTCA AGTCCAAAATGGAACAACAATGTGAAAGATTCAAGTCCGAGTATGAACAATCAGCAGGTTCCTAATGATTGGTGGTTTGAAGATGTTTCGATCCTTCGGA TTGATCACTTTGTCAGAGTCATTACTGCTATCAAGGTAAAGGGTATGAGGTTTGAATTGATTGGTGCAACAATAATGCATTATGCAACTAAATGGCTACC AGGGTTGATAAGTGAAACATCAATAACACAAGGTGATGAAGCAAGTATCAGCAGTATTAGTAATAGTAGTACTAGTACTAGTGGTGGTACTTGCTGGAAA GGTGGACTTCATATGATTGTGTCCGGAAACAAAGATGAGAGTTCAAGTGTGCAAGCTAAGGAACAAAGAATGATTATTGAGAGCCTCATAAGCATTATTC CACCTCAGAAGGACAGTGTCTCATGCAGCTTCCTTCTTAGGCTATTGAGGATGGCAAACATGTTAAAAGTTGCACCAGCACTAGTTACTGAATTGGAGAA AAGGGTTGGAATGCAATTTGAGCAAGCTACACTTGCTGATCTTCTTATCCCTTGTTATGAAAAAAGTGAGACTATGTATGATGTGGATCTTGCTCAGAGA CTAGTGGAGCATTTTCTTGTTCAAGAACAGACTGAAAATCCAAGTACACAATCATTCTCTGAAAATCAGATAGGGGGTAGTAATGTAAATGCCAAGGCAA AAGTGGCAAGGCTTGTTGATAGTTATCTTACTGAGGTGTCCAGGGATAGAAACCTTTCCCTCACAAAGTTTCAAGTACTTGCTGAAGCTTTGCCTGAGTC AGCTAGGACCTGTGATGATGGACTTTATAGAGCAATTGATTCCTATCTTAAGGCACATCCAACACTATCTGAGTATGAAAGGAAGAAACTGTGCCGAGTA ATGGATTGTCAGAAACTGTCCATTGATGCATGCATGCATGCTGCACAAAATGAAAGGCTTCCATTAAGGGTAGTTGTACAAGTTCTATTCTCTGAACAAG TCAAAATCAGCAATGCAATAGCCAGCAGTTCTGTGAAAAGTGTTGACTCTCACACTCAGCCAATGGTTATAAACAGAAAAACACTTCTTGAAGGGACACC ATATTCATTCCAAGAAGGATGGGCAAATGCTAAAAAAGACATAAACTCACTCAAGTTTGAGCTAGAGAGTGTGAAAACCAAGTACTTGGAGCTTCAAAAT GATATGGAAAGCTTGCAGAAACAATTTGATAAGATGATGCTGAAGCAGAAGCAAACATCAGCATGGAGCAGTGGGTGGAAGAAACTGAGCAAACTTACAA AGATGACTAATGTAGAGAGCCATCATGGTCATGGTCATGGTCATGGTCTTTCAACTAAGGTTCCAATTTCTGAAGAACAGAACAGAAAGACTACTAGAAG GTGGAGAAATTCTATATCCTGAGAAAGTTGAAGAATTAATATTGAATAATTAGTTCTCTATTTCTTTGAAACTCACTTTTCTGTTTGGTTATATTTCACT TATCTTCTTCTTTTGAACAGTAAATTAATAAGGCTTCAAGTTCTACATGATTCTTGTTCTAGCTAAATTGTAATTTGTCATCAAAGTTAATCATATTTTT CAAGCAAGTTCTATTGGCATTTCAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47679; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68708
| Blastp | Root phototropism protein 3 from Arabidopsis with 68.85% of identity |
|---|---|
| Blastx | Root phototropism protein 3 from Arabidopsis with 69.86% of identity |
| Eggnog | cellular response to blue light(ENOG41110QX) |
| Kegg | Link to kegg annotations (AT5G64330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418794.1) |
| Pfam | NPH3 family (PF03000.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |