| Id Trinity | FTRINITY_DN55001_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_68700 |
| Sequence | ACAAGCTCTATATTTTTCTCTTAGTTAAAGCTACTTTGGTAAGAGAAAAATATAGAGCTTGTTCTTTCTGTGAATCTTGTTTCATCTTTCAAGCATGTGG GAGTCAGGGAGTGAAGCAGGACAGGAATATGGTGCTGGAGTTCTCAGTTCAAGCAAGAATAGTGTCAGGACTGAAGGATTTGTTCAAAGAGGTCTTTCTT GGTATGTTGCCACTGATATTCCAAGTGACTTTTTAGTTCAAATTGGACAAGCTAACTTCCACATGCACAAGGTAGGTAGCTATCTTTTTCTCTTATGAAA ATTACTATGTTGTTTTATATAAAGAGATGAGATACTATAGTATCATACCACTCACTTGTACTATTGAACATTGTGACATTTTTTGTTGTGGAAGTATCCC TTGCTATCTAGAAGTGGAAAGCTGAATAGGATCATAAATGAATCAAGGGACCCTGATTTGAATAATATACTTATGGATGATATCCCTGGAGGGCCTGAGG CATTTGAACTTGCGGCGAAGTTTTGTTACGGAGTTGCTGTTGATTTAACAGCAGGCAATATCTCTGGCCTAAGATGTGCTGCTGAGTATCTTGAAATGAC AGAAGACTTAGAAGAAGGGAACCTTCTATTCAAAACAGAAGCATTCCTCAGCTATGTTGTTTTATCTTCATGGAGAGACTCAATAGTAGTGCTCAAAAGC TGTGAGAAGCTCTCACCATGGGCCGAGAACCTTCAAATTGTTCGCCGGTGCAGCGAGTCCATAGCTTGGAAGGCTTGTGCTAATCCAAAAGGAGTAAAGT GGTCGTACACCGGAAGAACAGCAAATGTTTCAAGTCCAAAATGGAACAACAATGTGAAAGATTCAAGTCCAAGTAGGATCAATCAGCAGGTTCCTAATGA TTGGTGGTTTGAAGATGTTTCAATCCTTAGGATTGATCACTTTGTTAGAGTCATCACTGCTATCAAGGTAAAGGGTATGCGATTCGAATTGGTTGGTGCT GCAATTATGCATTATGCAACTAAATGGCTACCAGGGTTGTTAAGTGACACAACAATTATCCAAGGTGATGAAACAAGTAAATGTAGCAATAGCATCTTCA ATAGTAGTAGTAGTAGTATTACAAGTGGTAGTACTAGCTGGAAAGGTGGATTTGATATGATTGTGGCTGGAACTAAAGATGAGAATTCAAGTGTTCAAGC TAAGGAACAAAGAATGATCATTGAAAGCCTAATAAGCATTATTCCACCTCAAAAGGACAGTGTCTCATGCAGCTTCCTTCTTCGGCTATTGAGAATGGCA AACATGTTAAAAGTTTCAGCTGCACTAGTCACCGAGTTGGAGAAAAGGGTTGGTATGCAATTTGAGCAGGCTACACTTTCTGATCTTCTTATTCCTTCTT ATGATAAAAGTGAAACTATGTATGATGTGGATCTTCTTCAGAGGCTATTGGAGCATTTTCTTGTTCAGGAACAGACTGAGAGTCCAAGTCCAAGTAGAAA ATCATTCTCTGAGAATAATATGGGTGGTAGTAATGTAAATGCCAAGGCAAGAGTGGCAAGAATTGTTGATAGTTATCTCACTGAGGTGTCAAGGGATAGA AACCTTTCCATGACAAAGTTTCAAGTACTTGCAGAAGCATTGCCTGAGTCAGCTAGAACATGTGATGATGGACTTTACAGAGCAATTGATTCATATCTTA AGGCACATGCAACACTATCTGAGCATGAAAGGAAGAGACTGTGCCGGGTAATGGATTGTCAAAAACTCTCCATTGATGCATGCATGCATGCTGCACAAAA TGAAAGGCTTCCATTAAGGGTAGTTGTACAAGTTCTATTCTCAGAACAAGTTAAAATCAGCAATGCACTAGCCAGCAATTCTGCGAAAAGTGTTGATTCT CGTGCTCAACCAATTGTTATAAACCGAAAAGCACTTCTTGAAGGGACACCACAATCATTCCAAGAAGGATGGACAAGTGCTAAAAAAGACATCAACACAC TCAAGTTTGAGCTTGAGAGTGTGAAAACCAAGTACTTGGAGCTTCAAAATGACATGGAAAGTTTGCAGAAACAATTTGATAAGGTGATGATGAAGCAGAA GCAAACATCAGCATGGAGTAGTGGATGGAAAAAACTAAGCAAACTTACAAAGATGACTCATGTAGAGAATCATCAATGCCTTTCACCTAAGGGTCCAGTT CCTGAAGAACAGAACAGAAAGACTACTAGAAAGTGGAGAAATTCTATATCTTGAGACATATGAGGAATTCTCAACTTCTTTGAAACTGATTTTAATTCTT GTTTGGTCATATTTTCACTCATTTTCTTGTTCTTCATGATTCTAGCTAAATTGTAATTTCTCACCAAAGTTAATCATATTTTTCAAGTGAGTTTTCTACT GGCACTTCAACTACAAATATGCCATTTGTTTATGCAGTTTTTTTTGGACAAAATACATATTTAGGAAGCTAAGGTGAGAGTACTCTGAATAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47680; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68700
| Blastp | Root phototropism protein 3 from Arabidopsis with 68% of identity |
|---|---|
| Blastx | Root phototropism protein 3 from Arabidopsis with 63.68% of identity |
| Eggnog | cellular response to blue light(ENOG41110QX) |
| Kegg | Link to kegg annotations (AT5G64330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425880.1) |
| Pfam | NPH3 family (PF03000.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |